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The map label for this gene is ybaV [C]

Identifier: 209694403

GI number: 209694403

Start: 917063

End: 917359

Strand: Direct

Name: ybaV [C]

Synonym: VSAL_I0824

Alternate gene names: 209694403

Gene position: 917063-917359 (Clockwise)

Preceding gene: 209694402

Following gene: 209694405

Centisome position: 27.58

GC content: 31.65

Gene sequence:

>297_bases
ATGTCAGTGTTTATTAATACTCTGTTACTAAGTTTTTGCTTGTTTACTAGCGGTGTAATAAGTGCAAGTGAAAAGGCCAT
TGATAAACATGAAGGTATTGAGATCGTTGTTAATATAAATAAAGCAGACATCGAAGAGTTAGATACATTACTTATTGGTG
TGGGTGAATCTAAAGCTCAAGCGATTATAGATTACCGCAACGAAAATGGTAAATTCACAACGATTAATGAATTAGCTAAT
GTGAAAGGTATTGGTGAAAAATTGATCGAGAAGAATAAAAACCGTATTAAGTTATAA

Upstream 100 bases:

>100_bases
CACTAATATAAATTTGATGATTGAAATGGATAAGCATTTTCCTGTTGTCTCAGCATCATGGTTACCATTCATTAAATGAT
AAGGGAAGAGAATGAAAGTT

Downstream 100 bases:

>100_bases
TATAGTTACCTAAAAAAGCCATTTCATACGATGAAATGGCTTTTTAGTTTTAGCCATGTCGTTATTACTTAAATAAGTAT
TACGATATAACTAGTGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Competence Protein ComEA Helix-Hairpin-Helix Repeat Protein; ComEA Protein; Competence Protein ComEA Helix-Hairpin-Helix Region; DNA Transport Competence Protein; ComEA Protein-Related Protein; Comea-Related DNA Uptake Protein; Flagellar Motor Switch Protein FliM; DNA Uptake Protein ComEA; ComE-Related Protein; Competence Protein ComEA Helix-Hairpin-Helix Repeat Region; Competence Protein ComEA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSVFINTLLLSFCLFTSGVISASEKAIDKHEGIEIVVNINKADIEELDTLLIGVGESKAQAIIDYRNENGKFTTINELAN
VKGIGEKLIEKNKNRIKL

Sequences:

>Translated_98_residues
MSVFINTLLLSFCLFTSGVISASEKAIDKHEGIEIVVNINKADIEELDTLLIGVGESKAQAIIDYRNENGKFTTINELAN
VKGIGEKLIEKNKNRIKL
>Mature_97_residues
SVFINTLLLSFCLFTSGVISASEKAIDKHEGIEIVVNINKADIEELDTLLIGVGESKAQAIIDYRNENGKFTTINELANV
KGIGEKLIEKNKNRIKL

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10807; Mature: 10675

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFINTLLLSFCLFTSGVISASEKAIDKHEGIEIVVNINKADIEELDTLLIGVGESKAQ
CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCHH
AIIDYRNENGKFTTINELANVKGIGEKLIEKNKNRIKL
EEEEEECCCCCEEEHHHHHCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SVFINTLLLSFCLFTSGVISASEKAIDKHEGIEIVVNINKADIEELDTLLIGVGESKAQ
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCHH
AIIDYRNENGKFTTINELANVKGIGEKLIEKNKNRIKL
EEEEEECCCCCEEEHHHHHCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA