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The map label for this gene is soj [H]

Identifier: 209693687

GI number: 209693687

Start: 62442

End: 63239

Strand: Direct

Name: soj [H]

Synonym: VSAL_I0058

Alternate gene names: 209693687

Gene position: 62442-63239 (Clockwise)

Preceding gene: 209693686

Following gene: 209693688

Centisome position: 1.88

GC content: 39.35

Gene sequence:

>798_bases
ATGGGTAAAATCATCGCAATCGGTAATGAAAAGGGTGGAGTCGGTAAAACGACTTCTGTTGTTAATTTGGCTTACTACTT
TTCTCATATGCGCAATAAAAAAGTGTTGGTTGTAGATATGGACCCGCAATGTAATTTGACGGATAAGTATTTTGACCAAA
ATGATGAGAGCAAAGCTAAACCTGCCTCTATCACTCGTAAAGTAGGTGAGGCGAATGTCATTTCTTTCTTTGATGAAGAG
TTCTATGGTAAGCCTGTTGAACTCAACCCTAATCTTCATATCTTTGGTGCCACTTTCAATATCAGTAGCCTTAACAACTG
CACAAATGACGAAATTGGTTTCTTTGCCGACAACCTGAATACATTGGCTGAACAATACGACTACGTATTTATTGACACTG
CCCCTTCTGTTGGAAACTTGCAATACTCGGCTCTTATCGCATGTGATGGTCTGTGGATACCAACGACAGCAGAAGAAGAC
AGCTTTCAAGGTGTGTCGAAGATCCTCAAATCTGTAGCGCGTATTAAAAGCACTTATGGTTTAGATGTATCTGTATTAGG
CATGTACTTAAACATGGTGAAAAAGATTCCTACTCAATTACAAGATCACTTCGCCACCAAGTTGTCTGAGGATTATGGCG
ACCTCGTATTCAATACTCAGGTTATCCATACAACTAGAGTTTCAGAAGCATCAGCGTTTAAGAAAAGCATCCTTGAGTAT
GATGCGAAAAAAGCTAAATACATCAATATCGATGCTTTAATGCAAGAGTTTGAATTGAAATCGGAGGCGTTGTCATGA

Upstream 100 bases:

>100_bases
TTGCATGCAAAATCCTGTTTTTTCCTATTGACTTTTTATGTTTTACCCGTAGTATTCACATGTAATCAGGCGTTAACGCC
AGTCTCAAAGGAGTAATACA

Downstream 100 bases:

>100_bases
GTAAGAAAAAAGACTTTAAATCTCTAATGAACAACAAATCTAAATCACTACTCGATGAAGAAATCAACGAGGTAAAGCCA
GGTGAAAGCGTTGTTCTCAT

Product: ParA chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MGKIIAIGNEKGGVGKTTSVVNLAYYFSHMRNKKVLVVDMDPQCNLTDKYFDQNDESKAKPASITRKVGEANVISFFDEE
FYGKPVELNPNLHIFGATFNISSLNNCTNDEIGFFADNLNTLAEQYDYVFIDTAPSVGNLQYSALIACDGLWIPTTAEED
SFQGVSKILKSVARIKSTYGLDVSVLGMYLNMVKKIPTQLQDHFATKLSEDYGDLVFNTQVIHTTRVSEASAFKKSILEY
DAKKAKYINIDALMQEFELKSEALS

Sequences:

>Translated_265_residues
MGKIIAIGNEKGGVGKTTSVVNLAYYFSHMRNKKVLVVDMDPQCNLTDKYFDQNDESKAKPASITRKVGEANVISFFDEE
FYGKPVELNPNLHIFGATFNISSLNNCTNDEIGFFADNLNTLAEQYDYVFIDTAPSVGNLQYSALIACDGLWIPTTAEED
SFQGVSKILKSVARIKSTYGLDVSVLGMYLNMVKKIPTQLQDHFATKLSEDYGDLVFNTQVIHTTRVSEASAFKKSILEY
DAKKAKYINIDALMQEFELKSEALS
>Mature_264_residues
GKIIAIGNEKGGVGKTTSVVNLAYYFSHMRNKKVLVVDMDPQCNLTDKYFDQNDESKAKPASITRKVGEANVISFFDEEF
YGKPVELNPNLHIFGATFNISSLNNCTNDEIGFFADNLNTLAEQYDYVFIDTAPSVGNLQYSALIACDGLWIPTTAEEDS
FQGVSKILKSVARIKSTYGLDVSVLGMYLNMVKKIPTQLQDHFATKLSEDYGDLVFNTQVIHTTRVSEASAFKKSILEYD
AKKAKYINIDALMQEFELKSEALS

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 29531; Mature: 29400

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIIAIGNEKGGVGKTTSVVNLAYYFSHMRNKKVLVVDMDPQCNLTDKYFDQNDESKAK
CCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCCCCCC
PASITRKVGEANVISFFDEEFYGKPVELNPNLHIFGATFNISSLNNCTNDEIGFFADNLN
CHHHHHHCCCCHHHHHHHHHHCCCCEEECCCEEEEEEEEECCCCCCCCCCCCCEEHHHHH
TLAEQYDYVFIDTAPSVGNLQYSALIACDGLWIPTTAEEDSFQGVSKILKSVARIKSTYG
HHHHHCCEEEEECCCCCCCEEEEEEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
LDVSVLGMYLNMVKKIPTQLQDHFATKLSEDYGDLVFNTQVIHTTRVSEASAFKKSILEY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCHHHHHHHHHHHHH
DAKKAKYINIDALMQEFELKSEALS
CCCCCEEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKIIAIGNEKGGVGKTTSVVNLAYYFSHMRNKKVLVVDMDPQCNLTDKYFDQNDESKAK
CCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCCCCCC
PASITRKVGEANVISFFDEEFYGKPVELNPNLHIFGATFNISSLNNCTNDEIGFFADNLN
CHHHHHHCCCCHHHHHHHHHHCCCCEEECCCEEEEEEEEECCCCCCCCCCCCCEEHHHHH
TLAEQYDYVFIDTAPSVGNLQYSALIACDGLWIPTTAEEDSFQGVSKILKSVARIKSTYG
HHHHHCCEEEEECCCCCCCEEEEEEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
LDVSVLGMYLNMVKKIPTQLQDHFATKLSEDYGDLVFNTQVIHTTRVSEASAFKKSILEY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCHHHHHHHHHHHHH
DAKKAKYINIDALMQEFELKSEALS
CCCCCEEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]