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The map label for this gene is parB [H]

Identifier: 209693688

GI number: 209693688

Start: 63236

End: 64210

Strand: Direct

Name: parB [H]

Synonym: VSAL_I0059

Alternate gene names: 209693688

Gene position: 63236-64210 (Clockwise)

Preceding gene: 209693687

Following gene: 209693689

Centisome position: 1.9

GC content: 39.49

Gene sequence:

>975_bases
ATGAGTAAGAAAAAAGACTTTAAATCTCTAATGAACAACAAATCTAAATCACTACTCGATGAAGAAATCAACGAGGTAAA
GCCAGGTGAAAGCGTTGTTCTCATTCCTAAAGAGGATATCTATTCGTCTGAACAAATACGTAAATTCTTTGATGAAGAGT
ACATTTTAGAGTTATCTAAAAATATGGACGATATTGGTCAGATTCAACCAATTGTTGTGACTCATAACGACATTCGAGGT
TACAAAATACAAGTGGGTGAGTGTCGTTGGAGAGCGGCAAATCTGAGTGACAAAATCACTCATGTAGAATGTTTGGTGCG
TGATGCGGGAACAGTGTTAGCGCAACTATCAGAAAACCTTCATCGAAACGATCTTACTCCTTTTGAAACAGGTCGTGCTT
TAGAGTTACTAATGGAAGAGCAAGGGATCGTTGAAAACAAAGATCTAGCCAATGTTGTGAGTTTATCTGAACCTCGTATT
AGCGCTTTTCGAAAGGCAGCTCAATGCCCTCCTTACATTGAACTTGCCTATCACAATGGTATTATCCGTGATGTTGATAC
GGTCAACTCTCTACGTATTGCGGGAGAACTAAGCGAAGTCGAAACAAAGAAACTTCTTGAATCCCCTGTTTCACGTAAAG
AAGCTAAAGATCTTGTGAAAAGCTTAAAGGCTTCTCAGAAAGAGCTTAAATCAGCTCAAGTTGATGAAGAACAGTCTTCC
CTTGAACATCAAGAAGTAGCTAATGAAAACCCTTCAAATAAAGCAGATCAAACTAAAGTGTCAGGTGTTATCCCTACCTC
ACAAAATAACGGGATAAGAATATCATTTGAGGGTAACCAAGGTTTCATAGATCTCAATGGCCAAGCCGAAAGTGGCAAAA
TAGTGATTGTGCTTGACGCTAGTTCAGGCAAATTGACCGTTCCTGCCTGCGAAGTTTCAGTGATTGGGTATCACTCGTTA
GAGCATGTCCACTAA

Upstream 100 bases:

>100_bases
CGTTTAAGAAAAGCATCCTTGAGTATGATGCGAAAAAAGCTAAATACATCAATATCGATGCTTTAATGCAAGAGTTTGAA
TTGAAATCGGAGGCGTTGTC

Downstream 100 bases:

>100_bases
TAAAAAGAAGTTGTCTCGAGTGGTGAATACTAATCGAGCCAGCCTAATTAAGTTGTACTCATTGCATTTTGAAGACAGTG
CCACTCAAGCCATTGAACAA

Product: chromosome partitioning protein ParB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSKKKDFKSLMNNKSKSLLDEEINEVKPGESVVLIPKEDIYSSEQIRKFFDEEYILELSKNMDDIGQIQPIVVTHNDIRG
YKIQVGECRWRAANLSDKITHVECLVRDAGTVLAQLSENLHRNDLTPFETGRALELLMEEQGIVENKDLANVVSLSEPRI
SAFRKAAQCPPYIELAYHNGIIRDVDTVNSLRIAGELSEVETKKLLESPVSRKEAKDLVKSLKASQKELKSAQVDEEQSS
LEHQEVANENPSNKADQTKVSGVIPTSQNNGIRISFEGNQGFIDLNGQAESGKIVIVLDASSGKLTVPACEVSVIGYHSL
EHVH

Sequences:

>Translated_324_residues
MSKKKDFKSLMNNKSKSLLDEEINEVKPGESVVLIPKEDIYSSEQIRKFFDEEYILELSKNMDDIGQIQPIVVTHNDIRG
YKIQVGECRWRAANLSDKITHVECLVRDAGTVLAQLSENLHRNDLTPFETGRALELLMEEQGIVENKDLANVVSLSEPRI
SAFRKAAQCPPYIELAYHNGIIRDVDTVNSLRIAGELSEVETKKLLESPVSRKEAKDLVKSLKASQKELKSAQVDEEQSS
LEHQEVANENPSNKADQTKVSGVIPTSQNNGIRISFEGNQGFIDLNGQAESGKIVIVLDASSGKLTVPACEVSVIGYHSL
EHVH
>Mature_323_residues
SKKKDFKSLMNNKSKSLLDEEINEVKPGESVVLIPKEDIYSSEQIRKFFDEEYILELSKNMDDIGQIQPIVVTHNDIRGY
KIQVGECRWRAANLSDKITHVECLVRDAGTVLAQLSENLHRNDLTPFETGRALELLMEEQGIVENKDLANVVSLSEPRIS
AFRKAAQCPPYIELAYHNGIIRDVDTVNSLRIAGELSEVETKKLLESPVSRKEAKDLVKSLKASQKELKSAQVDEEQSSL
EHQEVANENPSNKADQTKVSGVIPTSQNNGIRISFEGNQGFIDLNGQAESGKIVIVLDASSGKLTVPACEVSVIGYHSLE
HVH

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 36049; Mature: 35918

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKKDFKSLMNNKSKSLLDEEINEVKPGESVVLIPKEDIYSSEQIRKFFDEEYILELSK
CCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECHHCCCHHHHHHHHCHHHHHHHHC
NMDDIGQIQPIVVTHNDIRGYKIQVGECRWRAANLSDKITHVECLVRDAGTVLAQLSENL
CCCHHHCCCEEEEEECCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
HRNDLTPFETGRALELLMEEQGIVENKDLANVVSLSEPRISAFRKAAQCPPYIELAYHNG
HHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCC
IIRDVDTVNSLRIAGELSEVETKKLLESPVSRKEAKDLVKSLKASQKELKSAQVDEEQSS
EEECCHHHHHEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LEHQEVANENPSNKADQTKVSGVIPTSQNNGIRISFEGNQGFIDLNGQAESGKIVIVLDA
HHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEC
SSGKLTVPACEVSVIGYHSLEHVH
CCCEEEECEEEEEEEECCCCCCCC
>Mature Secondary Structure 
SKKKDFKSLMNNKSKSLLDEEINEVKPGESVVLIPKEDIYSSEQIRKFFDEEYILELSK
CCHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECHHCCCHHHHHHHHCHHHHHHHHC
NMDDIGQIQPIVVTHNDIRGYKIQVGECRWRAANLSDKITHVECLVRDAGTVLAQLSENL
CCCHHHCCCEEEEEECCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
HRNDLTPFETGRALELLMEEQGIVENKDLANVVSLSEPRISAFRKAAQCPPYIELAYHNG
HHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCC
IIRDVDTVNSLRIAGELSEVETKKLLESPVSRKEAKDLVKSLKASQKELKSAQVDEEQSS
EEECCHHHHHEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LEHQEVANENPSNKADQTKVSGVIPTSQNNGIRISFEGNQGFIDLNGQAESGKIVIVLDA
HHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEC
SSGKLTVPACEVSVIGYHSLEHVH
CCCEEEECEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]