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The map label for this gene is gatC [H]

Identifier: 203284260

GI number: 203284260

Start: 365419

End: 365694

Strand: Reverse

Name: gatC [H]

Synonym: BDU_342

Alternate gene names: 203284260

Gene position: 365694-365419 (Counterclockwise)

Preceding gene: 203284261

Following gene: 203284259

Centisome position: 39.25

GC content: 23.91

Gene sequence:

>276_bases
TTGAAAAATATTCATTTAGAGAATAGTTTAAAATTGAGTTTATTAAAGTTAAGTGAAGATGAAAAGCAGCAATTTGTTAT
GAAATTTGAAAAAATTGTTTATATGTTAGATAAAATTTCTGAATTTAAAATTAAAGATGGCTTCCATAAAGCAGTATGTA
ATTTTTCTGACTTAAGAGATGATGAGATTTTGCCTTCGTTGACAATAGAATCTATTAAGAATTTTAGCAATGTTTTTGTT
GATGGTTATTTTTTATCACCTAAAGTACTTGAATAG

Upstream 100 bases:

>100_bases
AGATGGTGGACCATTTCTTAAGATTAGTTTGAAAAATGGGAAAAAAGCTATTTTGAGTTCAAGTTATATTAAAAAACTTT
CTAAAATGTAGAGGTGAAAT

Downstream 100 bases:

>100_bases
GGAGTAATGATTTGGACTTAAGTGGTTTGAATTTAATAAAAATTAAAGAATTAATATTGACTCGGAAATATAAGATTTAT
GATATTATCCTTTATTATAA

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Glu-ADT subunit C [H]

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKNIHLENSLKLSLLKLSEDEKQQFVMKFEKIVYMLDKISEFKIKDGFHKAVCNFSDLRDDEILPSLTIESIKNFSNVFV
DGYFLSPKVLE

Sequences:

>Translated_91_residues
MKNIHLENSLKLSLLKLSEDEKQQFVMKFEKIVYMLDKISEFKIKDGFHKAVCNFSDLRDDEILPSLTIESIKNFSNVFV
DGYFLSPKVLE
>Mature_91_residues
MKNIHLENSLKLSLLKLSEDEKQQFVMKFEKIVYMLDKISEFKIKDGFHKAVCNFSDLRDDEILPSLTIESIKNFSNVFV
DGYFLSPKVLE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: NA

Molecular weight: Translated: 10662; Mature: 10662

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIHLENSLKLSLLKLSEDEKQQFVMKFEKIVYMLDKISEFKIKDGFHKAVCNFSDLRD
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCC
DEILPSLTIESIKNFSNVFVDGYFLSPKVLE
CCCCCHHHHHHHHHHHHHEECCEECCCCCCC
>Mature Secondary Structure
MKNIHLENSLKLSLLKLSEDEKQQFVMKFEKIVYMLDKISEFKIKDGFHKAVCNFSDLRD
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCC
DEILPSLTIESIKNFSNVFVDGYFLSPKVLE
CCCCCHHHHHHHHHHHHHEECCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]