Definition Borrelia duttonii Ly, complete genome.
Accession NC_011229
Length 931,674

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The map label for this gene is 203284031

Identifier: 203284031

GI number: 203284031

Start: 114786

End: 116441

Strand: Reverse

Name: 203284031

Synonym: BDU_109

Alternate gene names: NA

Gene position: 116441-114786 (Counterclockwise)

Preceding gene: 203284032

Following gene: 203284030

Centisome position: 12.5

GC content: 25.48

Gene sequence:

>1656_bases
TTGAAAACAAATAGGTTATTGTTATTTTTTATTTTGTTTTTAATCTTTTTTGTATCAATTTTTGTTTATTTGAGCTTAAA
TCCATATGTTTTGTATATATTAAAGGGAGAAAGGGATTTTAATGAGGTTATTATAGAAATTGATGATTATATTTCAAGTG
GGAATTTAGATAGTGCGGAGAAAGCAATTAAATTTTATTCTTATTATGCAGATACTGAATATAAGTGGCTTTCTCTTGTT
AAGAGAGCAAAGCTTTATTCTGATAAAATCAATCATTATGTGTTGATGAGAAATATTCTAGATTTGAGTGTTAAAAGTTT
ACCAGGGAATTTAAAGCTTAGAGCACTTGAAGTATATTCAAAACTTAAAGTAGGAGCTGTTTTAGAAGCTTATGATGTTG
CTAAGCAGTATTTATTGGGATATAAAGAATATAAATATTTATGTGATGAGGCTTTTATTAAAAGTTTGATTTTAAATTAT
GATGTCAAAGACATAAAGAGTTTTTTAATTAAAATGGAGCAAGAAAGAGATGCTCTTGCTTTTGAGACTATAGGATTCAA
TCTTCAAAATAATGCGTTTTTAATTAATGCAATGCTTTTGTATATAGATAAAAAAGATTTTGATGCTGCTAGGAGAATAC
TCTTAAAAATAAAAGAAGATAAGGATTTTGCTAAAGAACTTGCTTATATTTCTTACGGTCTTGATAATTTAGATTTTACT
ATTGCCAATCTTAAACTTCTTAGTGATAATAGTGAACCTAGTTTAATGTTTTTGTTAGCAGATGCTTATTTGAAGAAGGG
AGATATTAATAATGCTAAGAGTGAATATTTGAAACTTTATACAGATTTTCCTGATTATAGTATGATGATATATCTTGGGT
TGGCATTTATTGCAAAGAAAGAAAATGATTTAAAGCGTGCCATTACTTATCTGAATAAGGCCAATGAAAAATTTAAAGGA
AATGAAATGATGAATTATTATTTGGCTAGTATGTATTTTGAAATCAATGATTATTTTAATGCAAATGAGATTGTAAAAAG
ATATAAAGATAATCCTTTATTTTTTAAACTTTATTTTATTTTAAATTATTCAAATTTAAAATATGAAGCTAAAAAGTCTT
TTTTATGGCGTTTATTTTATAGATCAAACTATAGTAGTGATATTGCACAATTTTTGGCTTGGAATTTACTTCTTTATTCT
GATTTAAAGGATTTAGATTTGTTCTTTAATGTTTATAATCCTGTTGATGAAATACAGGATTGGTATTATTTTTATAAATT
TTATTATTTATTTCTAAAAAAGGACTTGGCTGTTGCAGAAAAAATACTTTTGCGTGAGCAAACGAACAAGTATTTATATG
GTATATATTATAATTTTGGGGTTCTAAAGTTTTATCAAAAAAACTATAAGGAATCAGAAGAATATTTTAGTAATGCAGTT
TCGACTTTACCTTTTGCTATTGATGATAAGAGTAGCATTAATTTAAAAGAGCGTGAGGATATAGCAAAAATATATTTAAA
GCGAGGGATTAATTATCTTTATTTAGGTGAATTTGAAAAGGGACTAGAGGCCATTTCAATTGCTAATTCTTTTTATGAAA
CTAATGAGGGTAAACTTTATATGAATATGATAAAGATATTTAAAGAGAGGAATTGA

Upstream 100 bases:

>100_bases
GATGAGGCTATTTTGATTGCTAAAAAATATGGCAATAAAAATTCTGATAAGTTTGTCAATGGTATACTTGATGCTTTGTT
AAAAGATATGGAGAGTTCTT

Downstream 100 bases:

>100_bases
ATATTTGAAATTAAGATTAAAATCTAGAGAAGAAATTGAAAAGATTAAGGCATCAGGTAGACTTTTAGCTCAAACTTTTT
TGGAAATCGAGAAAAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MKTNRLLLFFILFLIFFVSIFVYLSLNPYVLYILKGERDFNEVIIEIDDYISSGNLDSAEKAIKFYSYYADTEYKWLSLV
KRAKLYSDKINHYVLMRNILDLSVKSLPGNLKLRALEVYSKLKVGAVLEAYDVAKQYLLGYKEYKYLCDEAFIKSLILNY
DVKDIKSFLIKMEQERDALAFETIGFNLQNNAFLINAMLLYIDKKDFDAARRILLKIKEDKDFAKELAYISYGLDNLDFT
IANLKLLSDNSEPSLMFLLADAYLKKGDINNAKSEYLKLYTDFPDYSMMIYLGLAFIAKKENDLKRAITYLNKANEKFKG
NEMMNYYLASMYFEINDYFNANEIVKRYKDNPLFFKLYFILNYSNLKYEAKKSFLWRLFYRSNYSSDIAQFLAWNLLLYS
DLKDLDLFFNVYNPVDEIQDWYYFYKFYYLFLKKDLAVAEKILLREQTNKYLYGIYYNFGVLKFYQKNYKESEEYFSNAV
STLPFAIDDKSSINLKEREDIAKIYLKRGINYLYLGEFEKGLEAISIANSFYETNEGKLYMNMIKIFKERN

Sequences:

>Translated_551_residues
MKTNRLLLFFILFLIFFVSIFVYLSLNPYVLYILKGERDFNEVIIEIDDYISSGNLDSAEKAIKFYSYYADTEYKWLSLV
KRAKLYSDKINHYVLMRNILDLSVKSLPGNLKLRALEVYSKLKVGAVLEAYDVAKQYLLGYKEYKYLCDEAFIKSLILNY
DVKDIKSFLIKMEQERDALAFETIGFNLQNNAFLINAMLLYIDKKDFDAARRILLKIKEDKDFAKELAYISYGLDNLDFT
IANLKLLSDNSEPSLMFLLADAYLKKGDINNAKSEYLKLYTDFPDYSMMIYLGLAFIAKKENDLKRAITYLNKANEKFKG
NEMMNYYLASMYFEINDYFNANEIVKRYKDNPLFFKLYFILNYSNLKYEAKKSFLWRLFYRSNYSSDIAQFLAWNLLLYS
DLKDLDLFFNVYNPVDEIQDWYYFYKFYYLFLKKDLAVAEKILLREQTNKYLYGIYYNFGVLKFYQKNYKESEEYFSNAV
STLPFAIDDKSSINLKEREDIAKIYLKRGINYLYLGEFEKGLEAISIANSFYETNEGKLYMNMIKIFKERN
>Mature_551_residues
MKTNRLLLFFILFLIFFVSIFVYLSLNPYVLYILKGERDFNEVIIEIDDYISSGNLDSAEKAIKFYSYYADTEYKWLSLV
KRAKLYSDKINHYVLMRNILDLSVKSLPGNLKLRALEVYSKLKVGAVLEAYDVAKQYLLGYKEYKYLCDEAFIKSLILNY
DVKDIKSFLIKMEQERDALAFETIGFNLQNNAFLINAMLLYIDKKDFDAARRILLKIKEDKDFAKELAYISYGLDNLDFT
IANLKLLSDNSEPSLMFLLADAYLKKGDINNAKSEYLKLYTDFPDYSMMIYLGLAFIAKKENDLKRAITYLNKANEKFKG
NEMMNYYLASMYFEINDYFNANEIVKRYKDNPLFFKLYFILNYSNLKYEAKKSFLWRLFYRSNYSSDIAQFLAWNLLLYS
DLKDLDLFFNVYNPVDEIQDWYYFYKFYYLFLKKDLAVAEKILLREQTNKYLYGIYYNFGVLKFYQKNYKESEEYFSNAV
STLPFAIDDKSSINLKEREDIAKIYLKRGINYLYLGEFEKGLEAISIANSFYETNEGKLYMNMIKIFKERN

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65580; Mature: 65580

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNRLLLFFILFLIFFVSIFVYLSLNPYVLYILKGERDFNEVIIEIDDYISSGNLDSAE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEHHHCCCCCCCHHH
KAIKFYSYYADTEYKWLSLVKRAKLYSDKINHYVLMRNILDLSVKSLPGNLKLRALEVYS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
KLKVGAVLEAYDVAKQYLLGYKEYKYLCDEAFIKSLILNYDVKDIKSFLIKMEQERDALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEE
FETIGFNLQNNAFLINAMLLYIDKKDFDAARRILLKIKEDKDFAKELAYISYGLDNLDFT
EEEECCEECCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEE
IANLKLLSDNSEPSLMFLLADAYLKKGDINNAKSEYLKLYTDFPDYSMMIYLGLAFIAKK
EEEEEEECCCCCCCEEEEEEHHHHHCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHCC
ENDLKRAITYLNKANEKFKGNEMMNYYLASMYFEINDYFNANEIVKRYKDNPLFFKLYFI
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCEEEEEEEE
LNYSNLKYEAKKSFLWRLFYRSNYSSDIAQFLAWNLLLYSDLKDLDLFFNVYNPVDEIQD
EECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH
WYYFYKFYYLFLKKDLAVAEKILLREQTNKYLYGIYYNFGVLKFYQKNYKESEEYFSNAV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHH
STLPFAIDDKSSINLKEREDIAKIYLKRGINYLYLGEFEKGLEAISIANSFYETNEGKLY
HHCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEH
MNMIKIFKERN
HHHHHHHHCCC
>Mature Secondary Structure
MKTNRLLLFFILFLIFFVSIFVYLSLNPYVLYILKGERDFNEVIIEIDDYISSGNLDSAE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEHHHCCCCCCCHHH
KAIKFYSYYADTEYKWLSLVKRAKLYSDKINHYVLMRNILDLSVKSLPGNLKLRALEVYS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
KLKVGAVLEAYDVAKQYLLGYKEYKYLCDEAFIKSLILNYDVKDIKSFLIKMEQERDALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEE
FETIGFNLQNNAFLINAMLLYIDKKDFDAARRILLKIKEDKDFAKELAYISYGLDNLDFT
EEEECCEECCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEE
IANLKLLSDNSEPSLMFLLADAYLKKGDINNAKSEYLKLYTDFPDYSMMIYLGLAFIAKK
EEEEEEECCCCCCCEEEEEEHHHHHCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHCC
ENDLKRAITYLNKANEKFKGNEMMNYYLASMYFEINDYFNANEIVKRYKDNPLFFKLYFI
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCEEEEEEEE
LNYSNLKYEAKKSFLWRLFYRSNYSSDIAQFLAWNLLLYSDLKDLDLFFNVYNPVDEIQD
EECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH
WYYFYKFYYLFLKKDLAVAEKILLREQTNKYLYGIYYNFGVLKFYQKNYKESEEYFSNAV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHH
STLPFAIDDKSSINLKEREDIAKIYLKRGINYLYLGEFEKGLEAISIANSFYETNEGKLY
HHCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEH
MNMIKIFKERN
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA