Definition Borrelia duttonii Ly, complete genome.
Accession NC_011229
Length 931,674

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The map label for this gene is 203283967

Identifier: 203283967

GI number: 203283967

Start: 47686

End: 49146

Strand: Reverse

Name: 203283967

Synonym: BDU_43

Alternate gene names: NA

Gene position: 49146-47686 (Counterclockwise)

Preceding gene: 203283968

Following gene: 203283966

Centisome position: 5.28

GC content: 24.78

Gene sequence:

>1461_bases
ATGTTTTTTAAACAATATTTTATATTTCTTTTTTTCGTTTTATTTTCTTGTGTTAAAGGAAATAAGGATTTTATTATTTT
TAATAAAGATTTTAATAAAAAGATGAGTAATAGCAAATTAAATTATTCTGATGCAAATGTGAGTGAAGATTCTGGAGAGA
ATGTGTTTGGGTCTTTAATTGATCTGAAGGGTTATAAAATTTTGTCAGTTCATCAGGAAAATTTGAATTTAGATGTTTAT
TTTGAGCAAGTGGTTTTAGCTCAAAATTTTGCAGATTTGAAGACACATTTATTTATTATTGGTTTTGATCCTAAAAGTCA
TGAGGCAGTTGTTCTATTTAAGACACAAGTAAATATTGATTCTAAAAATTCTTATAATATGTATCTTGAAGATATTACTG
GTGATTATGATTTTGATATAGTTGTTCAGGGTTTTTTAGATGAATATGCTGTTTTATATGTTTTTAAAAGGGCAGTTGCT
AATGATGTTTCGTCATATAGACCTATATTTTTTGATAAGGTTAATGGAAACATTATTATAAATAAGTATTCTAGGTCTTC
TGCTTATGATGATAAGAAATCGAGGGAAAGTTATTCAATTTCTTTAGAGAGATATGAAAAGCAGGGGGAGGATATGATAG
TAAGTAAGATAGAAAAGTATGTATATTCTCAAGCGCAGGGTAAATATTATCCTTTGTCTACTAGTGAAAAGGTTAGACGT
ATAGATAATGATGTATATCAAACTTTAAAAAATTTACCTAAAGATGAAGTTTATAAATTTTTATATGGTGTTTGGTATGA
TAATGATTCTCATCAACGTTCAGGAAAGTTAGATCTTAAAAATATTTTGCTCTTATCATTTAATAGGCATTTTAATGAAA
TTAGTATTTTTAAGAATAATTCTCAAGAAATTGCACACATTGAATATATTTCAAGACCTGCCTATAATATTCTCAATATC
AGTACTAAATCTGTTTTTTCCGATTTAATAGTATATAACTTTTGGATTAAAATTGTTGATATTGACAATATTGAAATAAA
AATTGATACAGGAACAGATGCTTATGATAAGTATGGGTTCTCAGGTATTTTTAAACGATTTAATAATTCTGTTTTAGAGA
ATGATGATCAAAAATTTTTGTTTATTCCAAATGGTAATTATGTTTATAAAGATGTTATTTATGATTTTTCTTATCCTAGT
CTTACTTATATTGTTAAAGATAATATTTATTATGGAATTTTTAATGTTTTTAATTTAAATAATAATTTAGTTCTTGAATA
TGAAATTAGCATGGATGAGAATAAGGTAAGTGAGTCTTTTATTGTTGAGTATAGTGAGAGAATAGTTAATAATCAAAAAT
TTTCTACTATTATTCTTCATCCTATTAAGATTTTAAAAGATGAAGTAAGTTTGCTAAAAAGGCAAAAATTAAAACTTGAG
AGAATAGAGAAATTAGGGTAA

Upstream 100 bases:

>100_bases
TTTCTTTAAAGGATTTTAGTTTAAATGCCGGTAATTAGAGTGTAGTTTAAGCTTTTATATTTTATTGAGTATAAGAGTAG
ATATGTAAAAATCATGTGAT

Downstream 100 bases:

>100_bases
AAACCATATGAAAATATTAAGGAGTATTATTACTTATATTAGTTTTTTTTTCTTTGTATTGTTTTTTACTGTTTTATTTT
TTGTATTTTTAGTTTTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MFFKQYFIFLFFVLFSCVKGNKDFIIFNKDFNKKMSNSKLNYSDANVSEDSGENVFGSLIDLKGYKILSVHQENLNLDVY
FEQVVLAQNFADLKTHLFIIGFDPKSHEAVVLFKTQVNIDSKNSYNMYLEDITGDYDFDIVVQGFLDEYAVLYVFKRAVA
NDVSSYRPIFFDKVNGNIIINKYSRSSAYDDKKSRESYSISLERYEKQGEDMIVSKIEKYVYSQAQGKYYPLSTSEKVRR
IDNDVYQTLKNLPKDEVYKFLYGVWYDNDSHQRSGKLDLKNILLLSFNRHFNEISIFKNNSQEIAHIEYISRPAYNILNI
STKSVFSDLIVYNFWIKIVDIDNIEIKIDTGTDAYDKYGFSGIFKRFNNSVLENDDQKFLFIPNGNYVYKDVIYDFSYPS
LTYIVKDNIYYGIFNVFNLNNNLVLEYEISMDENKVSESFIVEYSERIVNNQKFSTIILHPIKILKDEVSLLKRQKLKLE
RIEKLG

Sequences:

>Translated_486_residues
MFFKQYFIFLFFVLFSCVKGNKDFIIFNKDFNKKMSNSKLNYSDANVSEDSGENVFGSLIDLKGYKILSVHQENLNLDVY
FEQVVLAQNFADLKTHLFIIGFDPKSHEAVVLFKTQVNIDSKNSYNMYLEDITGDYDFDIVVQGFLDEYAVLYVFKRAVA
NDVSSYRPIFFDKVNGNIIINKYSRSSAYDDKKSRESYSISLERYEKQGEDMIVSKIEKYVYSQAQGKYYPLSTSEKVRR
IDNDVYQTLKNLPKDEVYKFLYGVWYDNDSHQRSGKLDLKNILLLSFNRHFNEISIFKNNSQEIAHIEYISRPAYNILNI
STKSVFSDLIVYNFWIKIVDIDNIEIKIDTGTDAYDKYGFSGIFKRFNNSVLENDDQKFLFIPNGNYVYKDVIYDFSYPS
LTYIVKDNIYYGIFNVFNLNNNLVLEYEISMDENKVSESFIVEYSERIVNNQKFSTIILHPIKILKDEVSLLKRQKLKLE
RIEKLG
>Mature_486_residues
MFFKQYFIFLFFVLFSCVKGNKDFIIFNKDFNKKMSNSKLNYSDANVSEDSGENVFGSLIDLKGYKILSVHQENLNLDVY
FEQVVLAQNFADLKTHLFIIGFDPKSHEAVVLFKTQVNIDSKNSYNMYLEDITGDYDFDIVVQGFLDEYAVLYVFKRAVA
NDVSSYRPIFFDKVNGNIIINKYSRSSAYDDKKSRESYSISLERYEKQGEDMIVSKIEKYVYSQAQGKYYPLSTSEKVRR
IDNDVYQTLKNLPKDEVYKFLYGVWYDNDSHQRSGKLDLKNILLLSFNRHFNEISIFKNNSQEIAHIEYISRPAYNILNI
STKSVFSDLIVYNFWIKIVDIDNIEIKIDTGTDAYDKYGFSGIFKRFNNSVLENDDQKFLFIPNGNYVYKDVIYDFSYPS
LTYIVKDNIYYGIFNVFNLNNNLVLEYEISMDENKVSESFIVEYSERIVNNQKFSTIILHPIKILKDEVSLLKRQKLKLE
RIEKLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57126; Mature: 57126

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKQYFIFLFFVLFSCVKGNKDFIIFNKDFNKKMSNSKLNYSDANVSEDSGENVFGSLI
CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHE
DLKGYKILSVHQENLNLDVYFEQVVLAQNFADLKTHLFIIGFDPKSHEAVVLFKTQVNID
ECCCEEEEEEECCCCCEEEEEHHHHHHHCHHCCEEEEEEEEECCCCCCEEEEEEEEECCC
SKNSYNMYLEDITGDYDFDIVVQGFLDEYAVLYVFKRAVANDVSSYRPIFFDKVNGNIII
CCCCCEEEEEECCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEE
NKYSRSSAYDDKKSRESYSISLERYEKQGEDMIVSKIEKYVYSQAQGKYYPLSTSEKVRR
EECCCCCCCCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCHHHHHH
IDNDVYQTLKNLPKDEVYKFLYGVWYDNDSHQRSGKLDLKNILLLSFNRHFNEISIFKNN
HHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHEEEEEECCCCCEEEEEECC
SQEIAHIEYISRPAYNILNISTKSVFSDLIVYNFWIKIVDIDNIEIKIDTGTDAYDKYGF
CCCEEEEEHHCCCCCEEEECCHHHHHHHHHHEEEEEEEEEECCEEEEEECCCCHHHHCCH
SGIFKRFNNSVLENDDQKFLFIPNGNYVYKDVIYDFSYPSLTYIVKDNIYYGIFNVFNLN
HHHHHHHCCHHHCCCCCEEEEEECCCEEEEEEEEECCCCCEEEEEECCEEEEEEEEEECC
NNLVLEYEISMDENKVSESFIVEYSERIVNNQKFSTIILHPIKILKDEVSLLKRQKLKLE
CCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
RIEKLG
HHHHCC
>Mature Secondary Structure
MFFKQYFIFLFFVLFSCVKGNKDFIIFNKDFNKKMSNSKLNYSDANVSEDSGENVFGSLI
CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHE
DLKGYKILSVHQENLNLDVYFEQVVLAQNFADLKTHLFIIGFDPKSHEAVVLFKTQVNID
ECCCEEEEEEECCCCCEEEEEHHHHHHHCHHCCEEEEEEEEECCCCCCEEEEEEEEECCC
SKNSYNMYLEDITGDYDFDIVVQGFLDEYAVLYVFKRAVANDVSSYRPIFFDKVNGNIII
CCCCCEEEEEECCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEE
NKYSRSSAYDDKKSRESYSISLERYEKQGEDMIVSKIEKYVYSQAQGKYYPLSTSEKVRR
EECCCCCCCCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCHHHHHH
IDNDVYQTLKNLPKDEVYKFLYGVWYDNDSHQRSGKLDLKNILLLSFNRHFNEISIFKNN
HHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHEEEEEECCCCCEEEEEECC
SQEIAHIEYISRPAYNILNISTKSVFSDLIVYNFWIKIVDIDNIEIKIDTGTDAYDKYGF
CCCEEEEEHHCCCCCEEEECCHHHHHHHHHHEEEEEEEEEECCEEEEEECCCCHHHHCCH
SGIFKRFNNSVLENDDQKFLFIPNGNYVYKDVIYDFSYPSLTYIVKDNIYYGIFNVFNLN
HHHHHHHCCHHHCCCCCEEEEEECCCEEEEEEEEECCCCCEEEEEECCEEEEEEEEEECC
NNLVLEYEISMDENKVSESFIVEYSERIVNNQKFSTIILHPIKILKDEVSLLKRQKLKLE
CCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
RIEKLG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]