| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203283968
Identifier: 203283968
GI number: 203283968
Start: 49209
End: 50717
Strand: Reverse
Name: 203283968
Synonym: BDU_44
Alternate gene names: NA
Gene position: 50717-49209 (Counterclockwise)
Preceding gene: 203283970
Following gene: 203283967
Centisome position: 5.44
GC content: 25.71
Gene sequence:
>1509_bases ATGCGTAAGAGAATAAGTCAAACAAAAAGCGTTATATCTGGTGGTGAGAATGATAAAAGAGTTGGGATGTGGGGCATTTT TGCACTTATATTGATTGTATTTGGGTTTATTATTGCACCTTTAATGCCAGGATTATTTGATACTACTGATTCGTCTAATT TAAAGTTTGGCTTTTATAAGGGACAGCCGATTTATTATGCTAAAGATAATAAATTTGCACAATATGTTAATTTTTATTCA AATTTTTATTCTAAACTAAAAAGAGATAATAATTATGATATAGACTATTTTATTTGGCGCTTAGCTTTTATGAAGTATGT TGAGGATATTGCTTTTCTTGATTTGGCAAAGAGTAGTAACTTTTATATTTCAAAAAGTGTTTTGAGTCAAAATGTAATGA ACTCTCCTGTTTATTTAGATTCTAATGGTAATTTTAGTCCTAAAAGGTATAATAAAGTTTCTGATTATCAAAAGTTTAAA ATTTATAGTGACGCTGTGGAAAATTTGCTTTCTTCAAATATTCAGATTTTTTTGAATAGTAGTTTTGTATTTTCAGATTT TCTTTTAAGTGCTGTTAAGAATATGAGTAAGATTAGAAAAAATATTGCTTATATTACACTCTCTTATGAAGATTTTCCAA AAGATAAAGTAATATCTTATGCTGAAGATAATCAAAAGTTGTTTAAAAGTTTAGATCTTGTTTCTATTAGTTTTAAAAAT TTAAGTGATGCTAATGATGCTTATGACAAATTATTTAAGGGTATGCCTTTTGAAGAGGTTGCTAAGTTTTATTCTGAAGA CGTTGCTAATTTTAAAGGTATTGCTTCTTCTAGGCAGTATTATTTTGATTTAGATCTTATGCTTAAGGAAAAAGAAGATC TAAGTTCAATTTTTTCTTTGAAGGTAAATGAATTTACTAATCCTATTAAATCTAAGAGTTCAGGTGAATATAAAATATAT AAAGCGTTAAGTGATATTTATAATTTTGATCAAAATTCAAATAATGATATTAGTGCTGTTAAAAATTATATAGAAACTTA TGAACCCAATGTTATTGAGACTTACCTTGAAAATAAACTTAATGCTATTTTATCTGAAATTAATTCTGATGTTGGAGAGG AACGATCTTTGCAAAAATATAATTTGAAAGTAAAAGAAGATGTAGTTAATCTTGCATATAATATGAACATTTATTCTAGT ACTTTAAAAGAGCTTTCAATTTTTAGTAATAGTCAAGGTTTTTATGACTTAATTTTTGATTTGAAAGAAGGTCAATGGTC TAAACCCTTTTTAGCAGATCATAAAGTTTATTCATTTTATTTACGTTCATCTTCTAATGATTCTTATGAGTCTGATGCTT TAGTTCAAGAGGATCGTATTATTGATAATTTTTCTAAAGCAAATAGTAAGTTGCTATTAGATAATGTCTTAAAGAAAAAT AATTTTAAAGAAAATTTTAATGAGGCATTTTTTTCTTTAAAGGATTTTAGTTTAAATGCCGGTAATTAG
Upstream 100 bases:
>100_bases AAATATTTTTTTAATATAAATGTTTGAATTGAAATAATATGTGAATTATGCTATTTTAATATCTAAAATGCTATTTTATT TCAGTTGAAGGGTTTTTATT
Downstream 100 bases:
>100_bases AGTGTAGTTTAAGCTTTTATATTTTATTGAGTATAAGAGTAGATATGTAAAAATCATGTGATATGTTTTTTAAACAATAT TTTATATTTCTTTTTTTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MRKRISQTKSVISGGENDKRVGMWGIFALILIVFGFIIAPLMPGLFDTTDSSNLKFGFYKGQPIYYAKDNKFAQYVNFYS NFYSKLKRDNNYDIDYFIWRLAFMKYVEDIAFLDLAKSSNFYISKSVLSQNVMNSPVYLDSNGNFSPKRYNKVSDYQKFK IYSDAVENLLSSNIQIFLNSSFVFSDFLLSAVKNMSKIRKNIAYITLSYEDFPKDKVISYAEDNQKLFKSLDLVSISFKN LSDANDAYDKLFKGMPFEEVAKFYSEDVANFKGIASSRQYYFDLDLMLKEKEDLSSIFSLKVNEFTNPIKSKSSGEYKIY KALSDIYNFDQNSNNDISAVKNYIETYEPNVIETYLENKLNAILSEINSDVGEERSLQKYNLKVKEDVVNLAYNMNIYSS TLKELSIFSNSQGFYDLIFDLKEGQWSKPFLADHKVYSFYLRSSSNDSYESDALVQEDRIIDNFSKANSKLLLDNVLKKN NFKENFNEAFFSLKDFSLNAGN
Sequences:
>Translated_502_residues MRKRISQTKSVISGGENDKRVGMWGIFALILIVFGFIIAPLMPGLFDTTDSSNLKFGFYKGQPIYYAKDNKFAQYVNFYS NFYSKLKRDNNYDIDYFIWRLAFMKYVEDIAFLDLAKSSNFYISKSVLSQNVMNSPVYLDSNGNFSPKRYNKVSDYQKFK IYSDAVENLLSSNIQIFLNSSFVFSDFLLSAVKNMSKIRKNIAYITLSYEDFPKDKVISYAEDNQKLFKSLDLVSISFKN LSDANDAYDKLFKGMPFEEVAKFYSEDVANFKGIASSRQYYFDLDLMLKEKEDLSSIFSLKVNEFTNPIKSKSSGEYKIY KALSDIYNFDQNSNNDISAVKNYIETYEPNVIETYLENKLNAILSEINSDVGEERSLQKYNLKVKEDVVNLAYNMNIYSS TLKELSIFSNSQGFYDLIFDLKEGQWSKPFLADHKVYSFYLRSSSNDSYESDALVQEDRIIDNFSKANSKLLLDNVLKKN NFKENFNEAFFSLKDFSLNAGN >Mature_502_residues MRKRISQTKSVISGGENDKRVGMWGIFALILIVFGFIIAPLMPGLFDTTDSSNLKFGFYKGQPIYYAKDNKFAQYVNFYS NFYSKLKRDNNYDIDYFIWRLAFMKYVEDIAFLDLAKSSNFYISKSVLSQNVMNSPVYLDSNGNFSPKRYNKVSDYQKFK IYSDAVENLLSSNIQIFLNSSFVFSDFLLSAVKNMSKIRKNIAYITLSYEDFPKDKVISYAEDNQKLFKSLDLVSISFKN LSDANDAYDKLFKGMPFEEVAKFYSEDVANFKGIASSRQYYFDLDLMLKEKEDLSSIFSLKVNEFTNPIKSKSSGEYKIY KALSDIYNFDQNSNNDISAVKNYIETYEPNVIETYLENKLNAILSEINSDVGEERSLQKYNLKVKEDVVNLAYNMNIYSS TLKELSIFSNSQGFYDLIFDLKEGQWSKPFLADHKVYSFYLRSSSNDSYESDALVQEDRIIDNFSKANSKLLLDNVLKKN NFKENFNEAFFSLKDFSLNAGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58115; Mature: 58115
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRISQTKSVISGGENDKRVGMWGIFALILIVFGFIIAPLMPGLFDTTDSSNLKFGFYK CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC GQPIYYAKDNKFAQYVNFYSNFYSKLKRDNNYDIDYFIWRLAFMKYVEDIAFLDLAKSSN CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC FYISKSVLSQNVMNSPVYLDSNGNFSPKRYNKVSDYQKFKIYSDAVENLLSSNIQIFLNS CEEEHHHHHHHHCCCCEEECCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEEC SFVFSDFLLSAVKNMSKIRKNIAYITLSYEDFPKDKVISYAEDNQKLFKSLDLVSISFKN CHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEECCC LSDANDAYDKLFKGMPFEEVAKFYSEDVANFKGIASSRQYYFDLDLMLKEKEDLSSIFSL CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHH KVNEFTNPIKSKSSGEYKIYKALSDIYNFDQNSNNDISAVKNYIETYEPNVIETYLENKL HHHHHCCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH NAILSEINSDVGEERSLQKYNLKVKEDVVNLAYNMNIYSSTLKELSIFSNSQGFYDLIFD HHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEHEEE LKEGQWSKPFLADHKVYSFYLRSSSNDSYESDALVQEDRIIDNFSKANSKLLLDNVLKKN CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHC NFKENFNEAFFSLKDFSLNAGN CCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRKRISQTKSVISGGENDKRVGMWGIFALILIVFGFIIAPLMPGLFDTTDSSNLKFGFYK CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC GQPIYYAKDNKFAQYVNFYSNFYSKLKRDNNYDIDYFIWRLAFMKYVEDIAFLDLAKSSN CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC FYISKSVLSQNVMNSPVYLDSNGNFSPKRYNKVSDYQKFKIYSDAVENLLSSNIQIFLNS CEEEHHHHHHHHCCCCEEECCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEEC SFVFSDFLLSAVKNMSKIRKNIAYITLSYEDFPKDKVISYAEDNQKLFKSLDLVSISFKN CHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEECCC LSDANDAYDKLFKGMPFEEVAKFYSEDVANFKGIASSRQYYFDLDLMLKEKEDLSSIFSL CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHH KVNEFTNPIKSKSSGEYKIYKALSDIYNFDQNSNNDISAVKNYIETYEPNVIETYLENKL HHHHHCCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH NAILSEINSDVGEERSLQKYNLKVKEDVVNLAYNMNIYSSTLKELSIFSNSQGFYDLIFD HHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEHEEE LKEGQWSKPFLADHKVYSFYLRSSSNDSYESDALVQEDRIIDNFSKANSKLLLDNVLKKN CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHC NFKENFNEAFFSLKDFSLNAGN CCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]