| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cdsA [H]
Identifier: 308535318
GI number: 308535318
Start: 3181476
End: 3182267
Strand: Reverse
Name: cdsA [H]
Synonym: NA
Alternate gene names: 308535318
Gene position: 3182267-3181476 (Counterclockwise)
Preceding gene: 197119125
Following gene: 197119123
Centisome position: 68.95
GC content: 62.63
Gene sequence:
>792_bases ATCAAACGACTAGCCACCGCAGCGGTGCTGCTGCCGCTTGTGATACTGTTCATCCTGAAGGCCTCGGCATTCCAGTTCTC GCTGCTGGTTTTCCTGCTCGCGCTATTGGGGCTCGACGAGTTCTACCGGATGTCGCTCCCTGCCCGTCGCGGCGAGGGGA GGGCGGCCGCAGCGGCAGGTGCGCTTTCCCTTTTCACCATCTTCGCCGGGAATCCCGTCTTCCCCCTCATGGCGCTTACC TTGCTGGTGCTCGCCTTCTGCCTGGTCTCGCTCTTCAGGCTTAAGGAGATCCGGCAGGCGGCCCCCGACGCGGCCCTTTT GCTGACGGGTTTTCTCTACGTGCCGCTGCTCCTTGCCCACCTGGTCCTGATCCGGATGCTCCCCCACGGCACCTCCTGGC TCTTCCTGATCATGGTCATCGTCATGGCCGGCGACAGCGCCGCCTACTACGTCGGCTCCACCTTCGGCAAAAACAGGCTC TACCCCGCGGTGAGCCCGAAAAAGAGCATCGAAGGTTCCCTGGGAGGACTCGCGGGCAGCCTCGCCGGCGCCGTGATCGC CAAGTACACCTTCTTCCCGGAGCTGGCCATCTCTGACTGCATCGCCACGGCGCTCCTTCTGGGCGTGTTGGGGCAGTTGG GGGACCTCTTCGAATCGCTGATCAAAAGAAACTGCGGGGTCAAGGATTCCGGCACCATCATCCCCGGGCATGGCGGCATA CTGGACCGGCTGGACAGCATACTTTTTGCGGCGCCTGCCGCGTATTACTACGCCTATTTCCTGCTTCGCTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
NA
Sequences:
>Translated_263_residues MKRLATAAVLLPLVILFILKASAFQFSLLVFLLALLGLDEFYRMSLPARRGEGRAAAAAGALSLFTIFAGNPVFPLMALT LLVLAFCLVSLFRLKEIRQAAPDAALLLTGFLYVPLLLAHLVLIRMLPHGTSWLFLIMVIVMAGDSAAYYVGSTFGKNRL YPAVSPKKSIEGSLGGLAGSLAGAVIAKYTFFPELAISDCIATALLLGVLGQLGDLFESLIKRNCGVKDSGTIIPGHGGI LDRLDSILFAAPAAYYYAYFLLR >Mature_263_residues MKRLATAAVLLPLVILFILKASAFQFSLLVFLLALLGLDEFYRMSLPARRGEGRAAAAAGALSLFTIFAGNPVFPLMALT LLVLAFCLVSLFRLKEIRQAAPDAALLLTGFLYVPLLLAHLVLIRMLPHGTSWLFLIMVIVMAGDSAAYYVGSTFGKNRL YPAVSPKKSIEGSLGGLAGSLAGAVIAKYTFFPELAISDCIATALLLGVLGQLGDLFESLIKRNCGVKDSGTIIPGHGGI LDRLDSILFAAPAAYYYAYFLLR
Specific function: Phospholipid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=128, Percent_Identity=45.3125, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1787677, Length=115, Percent_Identity=40.8695652173913, Blast_Score=96, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 28149; Mature: 28149
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLATAAVLLPLVILFILKASAFQFSLLVFLLALLGLDEFYRMSLPARRGEGRAAAAAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHH ALSLFTIFAGNPVFPLMALTLLVLAFCLVSLFRLKEIRQAAPDAALLLTGFLYVPLLLAH HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LVLIRMLPHGTSWLFLIMVIVMAGDSAAYYVGSTFGKNRLYPAVSPKKSIEGSLGGLAGS HHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHH LAGAVIAKYTFFPELAISDCIATALLLGVLGQLGDLFESLIKRNCGVKDSGTIIPGHGGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCH LDRLDSILFAAPAAYYYAYFLLR HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRLATAAVLLPLVILFILKASAFQFSLLVFLLALLGLDEFYRMSLPARRGEGRAAAAAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHH ALSLFTIFAGNPVFPLMALTLLVLAFCLVSLFRLKEIRQAAPDAALLLTGFLYVPLLLAH HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LVLIRMLPHGTSWLFLIMVIVMAGDSAAYYVGSTFGKNRLYPAVSPKKSIEGSLGGLAGS HHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHH LAGAVIAKYTFFPELAISDCIATALLLGVLGQLGDLFESLIKRNCGVKDSGTIIPGHGGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCH LDRLDSILFAAPAAYYYAYFLLR HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA