Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is cdsA [H]

Identifier: 308535318

GI number: 308535318

Start: 3181476

End: 3182267

Strand: Reverse

Name: cdsA [H]

Synonym: NA

Alternate gene names: 308535318

Gene position: 3182267-3181476 (Counterclockwise)

Preceding gene: 197119125

Following gene: 197119123

Centisome position: 68.95

GC content: 62.63

Gene sequence:

>792_bases
ATCAAACGACTAGCCACCGCAGCGGTGCTGCTGCCGCTTGTGATACTGTTCATCCTGAAGGCCTCGGCATTCCAGTTCTC
GCTGCTGGTTTTCCTGCTCGCGCTATTGGGGCTCGACGAGTTCTACCGGATGTCGCTCCCTGCCCGTCGCGGCGAGGGGA
GGGCGGCCGCAGCGGCAGGTGCGCTTTCCCTTTTCACCATCTTCGCCGGGAATCCCGTCTTCCCCCTCATGGCGCTTACC
TTGCTGGTGCTCGCCTTCTGCCTGGTCTCGCTCTTCAGGCTTAAGGAGATCCGGCAGGCGGCCCCCGACGCGGCCCTTTT
GCTGACGGGTTTTCTCTACGTGCCGCTGCTCCTTGCCCACCTGGTCCTGATCCGGATGCTCCCCCACGGCACCTCCTGGC
TCTTCCTGATCATGGTCATCGTCATGGCCGGCGACAGCGCCGCCTACTACGTCGGCTCCACCTTCGGCAAAAACAGGCTC
TACCCCGCGGTGAGCCCGAAAAAGAGCATCGAAGGTTCCCTGGGAGGACTCGCGGGCAGCCTCGCCGGCGCCGTGATCGC
CAAGTACACCTTCTTCCCGGAGCTGGCCATCTCTGACTGCATCGCCACGGCGCTCCTTCTGGGCGTGTTGGGGCAGTTGG
GGGACCTCTTCGAATCGCTGATCAAAAGAAACTGCGGGGTCAAGGATTCCGGCACCATCATCCCCGGGCATGGCGGCATA
CTGGACCGGCTGGACAGCATACTTTTTGCGGCGCCTGCCGCGTATTACTACGCCTATTTCCTGCTTCGCTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:
NA

Sequences:

>Translated_263_residues
MKRLATAAVLLPLVILFILKASAFQFSLLVFLLALLGLDEFYRMSLPARRGEGRAAAAAGALSLFTIFAGNPVFPLMALT
LLVLAFCLVSLFRLKEIRQAAPDAALLLTGFLYVPLLLAHLVLIRMLPHGTSWLFLIMVIVMAGDSAAYYVGSTFGKNRL
YPAVSPKKSIEGSLGGLAGSLAGAVIAKYTFFPELAISDCIATALLLGVLGQLGDLFESLIKRNCGVKDSGTIIPGHGGI
LDRLDSILFAAPAAYYYAYFLLR
>Mature_263_residues
MKRLATAAVLLPLVILFILKASAFQFSLLVFLLALLGLDEFYRMSLPARRGEGRAAAAAGALSLFTIFAGNPVFPLMALT
LLVLAFCLVSLFRLKEIRQAAPDAALLLTGFLYVPLLLAHLVLIRMLPHGTSWLFLIMVIVMAGDSAAYYVGSTFGKNRL
YPAVSPKKSIEGSLGGLAGSLAGAVIAKYTFFPELAISDCIATALLLGVLGQLGDLFESLIKRNCGVKDSGTIIPGHGGI
LDRLDSILFAAPAAYYYAYFLLR

Specific function: Phospholipid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=128, Percent_Identity=45.3125, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1787677, Length=115, Percent_Identity=40.8695652173913, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 28149; Mature: 28149

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLATAAVLLPLVILFILKASAFQFSLLVFLLALLGLDEFYRMSLPARRGEGRAAAAAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHH
ALSLFTIFAGNPVFPLMALTLLVLAFCLVSLFRLKEIRQAAPDAALLLTGFLYVPLLLAH
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVLIRMLPHGTSWLFLIMVIVMAGDSAAYYVGSTFGKNRLYPAVSPKKSIEGSLGGLAGS
HHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHH
LAGAVIAKYTFFPELAISDCIATALLLGVLGQLGDLFESLIKRNCGVKDSGTIIPGHGGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCH
LDRLDSILFAAPAAYYYAYFLLR
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRLATAAVLLPLVILFILKASAFQFSLLVFLLALLGLDEFYRMSLPARRGEGRAAAAAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHH
ALSLFTIFAGNPVFPLMALTLLVLAFCLVSLFRLKEIRQAAPDAALLLTGFLYVPLLLAH
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVLIRMLPHGTSWLFLIMVIVMAGDSAAYYVGSTFGKNRLYPAVSPKKSIEGSLGGLAGS
HHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHH
LAGAVIAKYTFFPELAISDCIATALLLGVLGQLGDLFESLIKRNCGVKDSGTIIPGHGGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCH
LDRLDSILFAAPAAYYYAYFLLR
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA