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The map label for this gene is bphB [H]

Identifier: 308535285

GI number: 308535285

Start: 2478536

End: 2480935

Strand: Reverse

Name: bphB [H]

Synonym: NA

Alternate gene names: 308535285

Gene position: 2480935-2478536 (Counterclockwise)

Preceding gene: 197118518

Following gene: 197118512

Centisome position: 53.76

GC content: 61.21

Gene sequence:

>2400_bases
ATGAACAATCTGTCGGAAGTTGCGACCCCTGTCAACAGCAGGACGAAAAGAACTCCTATTCCTTTTGCGGACCCCGCATC
CGCCCCACTCATGCAGCGGGAGCCTATCCGCATCGATTATGAGCAGGTGCTGCGCACCATCTTCACAACGGCGCCCCTTG
GCTTGTACCAGACCGACATCGACGGCCGGAGAATCGCAGGTGTTGCAGAGGATGGCGAGAACGAAGCGCTGATCGGCTTC
ATCCACCCCCAGGAGCGCAAGGAGCTCACGGCCAGCTGGCAGCAGAGCATGGAGAGCGGAGCCCAATGGTCGCAACGCTT
CAAGTACCGTTCAGCCGACGGCAGGGTTTTCTGGCTGCATGCGGTGATCGCCCAGGTGCGAAACAGCCGGGGCGAAGTAA
CCGGCTACCAGGGTTGCAACCTCGACATCACAGCTGAAGTGCGCGTCAACGAACAACTGGCACTCAGCGAGGAGCGCCAC
CGTAAGGCGGTGGAGGCGGTGAGTGCGGGAATCTGGGATTTGGACGTCGCCACCAGCACCTGCTTCTTCAGCCCCTTTTG
CTACGAGATGCTCGGCTACCGCCCCGGGCAGTCGCCGGTGAAACTGGAGGACTGGAGCTGCATCCTGCACCCGGCACAGT
TGGAAGCCGCGCGCGCCCTCAAGGAAAGATGCGTAGAGGGGGCCGTGGAGAATTTCGAATTCGAATTCCGCCTGAAGACC
AACGAGGGAAAATGGCGCTGGTTTCGCTGTGAGGGGAAAGCGGCCGGCCGAGACGCATCAGGTAGGGCAATCCGGCTGGC
AGGGATATTGTGCGACATCAACCAGGGCAAGATGATGGAACACCTGCTGCGCATGGAGCACGACCTGCTGAACCTGATCA
CCGCCACGAGCCCCGTCGGTATCATGTTCATCGAACCCGGCGGCAAGGTGGCCTTTGCCAATCCCCGCGCCGAACTTATC
CTCGGGCAGTCCAAGCAGGAGATGGCGGCCAGAAACGACGGCTCCCCGGTCTGGGGCATCACCCGCGAACAAAGCCAAGG
CAGCGTCGCGCCCGACCTGTCGCTTGGGGAACTGCTGCGCGCAGGCGATACCCTGTCGAACGCCTGCTTCCGGTTCCTGC
GCCCGGACGGCGTAGCCGCGCTCCTCTCCATCAGCACCGCCCCTTTCCTGGATCAGGCCAGCAAGGTGAGCGGGACCGTG
GTGACGCTCGAGGACGTTTCGGAACAAAAGCAGCGCGAGCAGGTCATGGCCGACAACGACCGGTTGCTGCGCGAAACCCA
GAGAATCGCCCAGTTGGGAAGCTACGTCCTCGATCTGGCCGGGGACCGCTGGAACTGCTCCAGCAAACTGGAGGAGATCC
TGGGAATGGATCGAACCTTTCCCAGGACCCTGCAGGGGCACTTCGAGATGGTCCACGACGAGTACCGGCAGCTTTTCAAG
GAAAGGTACCTGGCCGCCATCGGCGACGGGCGCCCCTTCGAGATGGAATACCCGATTCGCAGGCAAAGCGACGGCGTGGA
ACGCTGGGTCACCGAGTGCTGCGAGCTTTCCGGGGTGGCCGCAGGGAAGCAGCAGCGGATGATCGGCACCATCAAGGACA
TCACCGAGAGAAAGGAGGCCGAAGAGGCGATCAGGAAACTGAACGACGAATTGGACCGGCGGGTGATTGAAAGAACCTCA
CAGCTGGCGGTGGCAAAGCAGGAAATCGAGTCCTTCAGCTATTCCGTTTCCCATGACCTCCGAGCTCCGCTACGACATAT
CAACAGCTACAGTTCCATCCTGATCGAGGAGCACGGCCACGCGCTCCCTGAGGAGGCTCACTACTACCTGGAGCGGATCA
GCACCGCCAGTTCCAGGATGGGAAAGCAGATAGACGACCTCTTGACCCTCACCAGGGTGGGTAGAACTTTGATGAAGCGC
CAAACCTTCGACATCAGCCTTCTTGCGGCGGAGGTAGCCGACATGCTGGCCGGGGAGGAGGGCTCGCAACCAGTCGAGTT
CCTGATACAGAGAGGGCTGACTGCTTTCGGCGACAGCGTGCTGGTGCGCCTTGTTTTGCAGAACCTGCTGGGCAATTCGA
TGAAGTACGCCTCCCGGGTCCCCCGTCCGGTGATCGAGTTCGGCCAGATTCAGGGTCGCGGGCGCCAGACCTTCTTCGTA
AAGGACAACGGGGTCGGCTTCGACATGGCCTACGTGGACAAGCTCTTCCAACCGTTCCAACGCCTGCACGGTTCCGAATT
CGAGGGAACCGGCATCGGGCTTGCCACGGTGCGCCGCATCATCGATCGCCACGGAGGGAGCATCTGGGCCGAGGGGATGG
AGAACCGCGGCGCCACCTTCTATTTCACCCTTTCCCAGCCGCGCAAAAATGCTGCGCAACACGAGCCGGATTTAAGCTAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: PAS/PAC domain-containing sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 799; Mature: 799

Protein sequence:
NA

Sequences:

>Translated_799_residues
MNNLSEVATPVNSRTKRTPIPFADPASAPLMQREPIRIDYEQVLRTIFTTAPLGLYQTDIDGRRIAGVAEDGENEALIGF
IHPQERKELTASWQQSMESGAQWSQRFKYRSADGRVFWLHAVIAQVRNSRGEVTGYQGCNLDITAEVRVNEQLALSEERH
RKAVEAVSAGIWDLDVATSTCFFSPFCYEMLGYRPGQSPVKLEDWSCILHPAQLEAARALKERCVEGAVENFEFEFRLKT
NEGKWRWFRCEGKAAGRDASGRAIRLAGILCDINQGKMMEHLLRMEHDLLNLITATSPVGIMFIEPGGKVAFANPRAELI
LGQSKQEMAARNDGSPVWGITREQSQGSVAPDLSLGELLRAGDTLSNACFRFLRPDGVAALLSISTAPFLDQASKVSGTV
VTLEDVSEQKQREQVMADNDRLLRETQRIAQLGSYVLDLAGDRWNCSSKLEEILGMDRTFPRTLQGHFEMVHDEYRQLFK
ERYLAAIGDGRPFEMEYPIRRQSDGVERWVTECCELSGVAAGKQQRMIGTIKDITERKEAEEAIRKLNDELDRRVIERTS
QLAVAKQEIESFSYSVSHDLRAPLRHINSYSSILIEEHGHALPEEAHYYLERISTASSRMGKQIDDLLTLTRVGRTLMKR
QTFDISLLAAEVADMLAGEEGSQPVEFLIQRGLTAFGDSVLVRLVLQNLLGNSMKYASRVPRPVIEFGQIQGRGRQTFFV
KDNGVGFDMAYVDKLFQPFQRLHGSEFEGTGIGLATVRRIIDRHGGSIWAEGMENRGATFYFTLSQPRKNAAQHEPDLS
>Mature_799_residues
MNNLSEVATPVNSRTKRTPIPFADPASAPLMQREPIRIDYEQVLRTIFTTAPLGLYQTDIDGRRIAGVAEDGENEALIGF
IHPQERKELTASWQQSMESGAQWSQRFKYRSADGRVFWLHAVIAQVRNSRGEVTGYQGCNLDITAEVRVNEQLALSEERH
RKAVEAVSAGIWDLDVATSTCFFSPFCYEMLGYRPGQSPVKLEDWSCILHPAQLEAARALKERCVEGAVENFEFEFRLKT
NEGKWRWFRCEGKAAGRDASGRAIRLAGILCDINQGKMMEHLLRMEHDLLNLITATSPVGIMFIEPGGKVAFANPRAELI
LGQSKQEMAARNDGSPVWGITREQSQGSVAPDLSLGELLRAGDTLSNACFRFLRPDGVAALLSISTAPFLDQASKVSGTV
VTLEDVSEQKQREQVMADNDRLLRETQRIAQLGSYVLDLAGDRWNCSSKLEEILGMDRTFPRTLQGHFEMVHDEYRQLFK
ERYLAAIGDGRPFEMEYPIRRQSDGVERWVTECCELSGVAAGKQQRMIGTIKDITERKEAEEAIRKLNDELDRRVIERTS
QLAVAKQEIESFSYSVSHDLRAPLRHINSYSSILIEEHGHALPEEAHYYLERISTASSRMGKQIDDLLTLTRVGRTLMKR
QTFDISLLAAEVADMLAGEEGSQPVEFLIQRGLTAFGDSVLVRLVLQNLLGNSMKYASRVPRPVIEFGQIQGRGRQTFFV
KDNGVGFDMAYVDKLFQPFQRLHGSEFEGTGIGLATVRRIIDRHGGSIWAEGMENRGATFYFTLSQPRKNAAQHEPDLS

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=313, Percent_Identity=25.2396166134185, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1788549, Length=405, Percent_Identity=24.4444444444444, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789149, Length=270, Percent_Identity=23.3333333333333, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786912, Length=306, Percent_Identity=26.1437908496732, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1790346, Length=203, Percent_Identity=28.0788177339901, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=25.3112033195021, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 89792; Mature: 89792

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLSEVATPVNSRTKRTPIPFADPASAPLMQREPIRIDYEQVLRTIFTTAPLGLYQTDI
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECC
DGRRIAGVAEDGENEALIGFIHPQERKELTASWQQSMESGAQWSQRFKYRSADGRVFWLH
CCCEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH
AVIAQVRNSRGEVTGYQGCNLDITAEVRVNEQLALSEERHRKAVEAVSAGIWDLDVATST
HHHHHHHCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEHHHHHH
CFFSPFCYEMLGYRPGQSPVKLEDWSCILHPAQLEAARALKERCVEGAVENFEFEFRLKT
HHHCHHHHHHHCCCCCCCCCEECCCEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
NEGKWRWFRCEGKAAGRDASGRAIRLAGILCDINQGKMMEHLLRMEHDLLNLITATSPVG
CCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCE
IMFIEPGGKVAFANPRAELILGQSKQEMAARNDGSPVWGITREQSQGSVAPDLSLGELLR
EEEECCCCEEEECCCCEEEEECCCHHHHHHCCCCCCEECEECCCCCCCCCCCCCHHHHHH
AGDTLSNACFRFLRPDGVAALLSISTAPFLDQASKVSGTVVTLEDVSEQKQREQVMADND
CCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCH
RLLRETQRIAQLGSYVLDLAGDRWNCSSKLEEILGMDRTFPRTLQGHFEMVHDEYRQLFK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ERYLAAIGDGRPFEMEYPIRRQSDGVERWVTECCELSGVAAGKQQRMIGTIKDITERKEA
HHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EEAIRKLNDELDRRVIERTSQLAVAKQEIESFSYSVSHDLRAPLRHINSYSSILIEEHGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
ALPEEAHYYLERISTASSRMGKQIDDLLTLTRVGRTLMKRQTFDISLLAAEVADMLAGEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
GSQPVEFLIQRGLTAFGDSVLVRLVLQNLLGNSMKYASRVPRPVIEFGQIQGRGRQTFFV
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCCCCEEEEE
KDNGVGFDMAYVDKLFQPFQRLHGSEFEGTGIGLATVRRIIDRHGGSIWAEGMENRGATF
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEE
YFTLSQPRKNAAQHEPDLS
EEEECCCCCHHHCCCCCCC
>Mature Secondary Structure
MNNLSEVATPVNSRTKRTPIPFADPASAPLMQREPIRIDYEQVLRTIFTTAPLGLYQTDI
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECC
DGRRIAGVAEDGENEALIGFIHPQERKELTASWQQSMESGAQWSQRFKYRSADGRVFWLH
CCCEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH
AVIAQVRNSRGEVTGYQGCNLDITAEVRVNEQLALSEERHRKAVEAVSAGIWDLDVATST
HHHHHHHCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEHHHHHH
CFFSPFCYEMLGYRPGQSPVKLEDWSCILHPAQLEAARALKERCVEGAVENFEFEFRLKT
HHHCHHHHHHHCCCCCCCCCEECCCEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
NEGKWRWFRCEGKAAGRDASGRAIRLAGILCDINQGKMMEHLLRMEHDLLNLITATSPVG
CCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCE
IMFIEPGGKVAFANPRAELILGQSKQEMAARNDGSPVWGITREQSQGSVAPDLSLGELLR
EEEECCCCEEEECCCCEEEEECCCHHHHHHCCCCCCEECEECCCCCCCCCCCCCHHHHHH
AGDTLSNACFRFLRPDGVAALLSISTAPFLDQASKVSGTVVTLEDVSEQKQREQVMADND
CCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCH
RLLRETQRIAQLGSYVLDLAGDRWNCSSKLEEILGMDRTFPRTLQGHFEMVHDEYRQLFK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ERYLAAIGDGRPFEMEYPIRRQSDGVERWVTECCELSGVAAGKQQRMIGTIKDITERKEA
HHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EEAIRKLNDELDRRVIERTSQLAVAKQEIESFSYSVSHDLRAPLRHINSYSSILIEEHGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
ALPEEAHYYLERISTASSRMGKQIDDLLTLTRVGRTLMKRQTFDISLLAAEVADMLAGEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
GSQPVEFLIQRGLTAFGDSVLVRLVLQNLLGNSMKYASRVPRPVIEFGQIQGRGRQTFFV
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCCCCEEEEE
KDNGVGFDMAYVDKLFQPFQRLHGSEFEGTGIGLATVRRIIDRHGGSIWAEGMENRGATF
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEE
YFTLSQPRKNAAQHEPDLS
EEEECCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]