Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is yitL [H]

Identifier: 197118518

GI number: 197118518

Start: 2484476

End: 2485300

Strand: Reverse

Name: yitL [H]

Synonym: Gbem_2136

Alternate gene names: 197118518

Gene position: 2485300-2484476 (Counterclockwise)

Preceding gene: 308535286

Following gene: 308535285

Centisome position: 53.85

GC content: 58.67

Gene sequence:

>825_bases
ATGCTGGAAGTAGGAAAATACAACAGGCTCGAAGTAAAGAAGATCAGCGCCATCGGCGCATTCCTCGTCTCGGAACTAGG
TGACATCCTGATGCCGACCAAATACGTCCCCGAGGGGCTGCACCCGGGCGAGCACGTAAAGGTCTTCGTCTACCTCGATT
CGGAAGACCGTCTCCTGGCGACCACCTTGACCCCCAAGGCCCAGGTGGGGGACTTCGCCGTACTGGAAGTGAAAGATGTA
GGCAACGTGGGCGCTTTTTTGGACTGGGGGCTGGAAAAGGACCTGCTGGTACCTTTCAGCGAACAGCCAAAGCCGATGAA
CAAGGGAGAAAAGCACCTGGTGCGGGTCTACCTGGACCGTTCGGAGCGCATCGCCGCCTCGGCCAAGCTGGGGAAGTTCC
TTGAGAAGTCGCGCATCGAACTGAAGGAGGGAGATGAGGTAAGACTGACCTTCTACCAGTTCGGCGACCTGGGGGCCAAG
GTCATCATCAACGACCGTTACGACGGGCTCTTGTTCAAGAGCGAGCTCTTCGGCAGATATGAGGTGGGCACTTCGGCCAA
GGGGTTCGTCAAGAAGATCCGCCCCGACGGAAAGATCGACGTGACGCTCAGGAAAGGCGGCGGGAAGGACCTCCACGGCA
GCCGCGAGAGCGTGCTTCGGGTGCTGAGCGAGAGGGGGGGCTTTCTTCCGGTAGGCGACAAGTCCTCGCCGGAGCTGATT
TCGGAGATGTTCAGCATGAGCAAGAAGAGCTTCAAGACCGTGATCGGGAACCTCTACAAGGAAGGGGTGATCCAGATCAC
GCCTGAGGGTATCCGGCTGCGCTGA

Upstream 100 bases:

>100_bases
TTTGATGCAGTATCTGCTATAGTAATCGGAATAACTGCTAAAAAATAAAATAGATTTTGAATGTTACGCTGTGCCGCAAC
ATGAAATGGAGCGCCAACCG

Downstream 100 bases:

>100_bases
CCGCCCCTCCCCTCCCAGCAAATCAAAAGAGCCCGGTCGCTGCTGCGATCCGGGCTCTTTACGTTATGGCAACTGGCTAA
GGGGGACAGGCTAAGGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLEVGKYNRLEVKKISAIGAFLVSELGDILMPTKYVPEGLHPGEHVKVFVYLDSEDRLLATTLTPKAQVGDFAVLEVKDV
GNVGAFLDWGLEKDLLVPFSEQPKPMNKGEKHLVRVYLDRSERIAASAKLGKFLEKSRIELKEGDEVRLTFYQFGDLGAK
VIINDRYDGLLFKSELFGRYEVGTSAKGFVKKIRPDGKIDVTLRKGGGKDLHGSRESVLRVLSERGGFLPVGDKSSPELI
SEMFSMSKKSFKTVIGNLYKEGVIQITPEGIRLR

Sequences:

>Translated_274_residues
MLEVGKYNRLEVKKISAIGAFLVSELGDILMPTKYVPEGLHPGEHVKVFVYLDSEDRLLATTLTPKAQVGDFAVLEVKDV
GNVGAFLDWGLEKDLLVPFSEQPKPMNKGEKHLVRVYLDRSERIAASAKLGKFLEKSRIELKEGDEVRLTFYQFGDLGAK
VIINDRYDGLLFKSELFGRYEVGTSAKGFVKKIRPDGKIDVTLRKGGGKDLHGSRESVLRVLSERGGFLPVGDKSSPELI
SEMFSMSKKSFKTVIGNLYKEGVIQITPEGIRLR
>Mature_274_residues
MLEVGKYNRLEVKKISAIGAFLVSELGDILMPTKYVPEGLHPGEHVKVFVYLDSEDRLLATTLTPKAQVGDFAVLEVKDV
GNVGAFLDWGLEKDLLVPFSEQPKPMNKGEKHLVRVYLDRSERIAASAKLGKFLEKSRIELKEGDEVRLTFYQFGDLGAK
VIINDRYDGLLFKSELFGRYEVGTSAKGFVKKIRPDGKIDVTLRKGGGKDLHGSRESVLRVLSERGGFLPVGDKSSPELI
SEMFSMSKKSFKTVIGNLYKEGVIQITPEGIRLR

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30536; Mature: 30536

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVGKYNRLEVKKISAIGAFLVSELGDILMPTKYVPEGLHPGEHVKVFVYLDSEDRLLA
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEE
TTLTPKAQVGDFAVLEVKDVGNVGAFLDWGLEKDLLVPFSEQPKPMNKGEKHLVRVYLDR
EECCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEEECC
SERIAASAKLGKFLEKSRIELKEGDEVRLTFYQFGDLGAKVIINDRYDGLLFKSELFGRY
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCEEEHHHHCCEE
EVGTSAKGFVKKIRPDGKIDVTLRKGGGKDLHGSRESVLRVLSERGGFLPVGDKSSPELI
ECCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHH
SEMFSMSKKSFKTVIGNLYKEGVIQITPEGIRLR
HHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
>Mature Secondary Structure
MLEVGKYNRLEVKKISAIGAFLVSELGDILMPTKYVPEGLHPGEHVKVFVYLDSEDRLLA
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEE
TTLTPKAQVGDFAVLEVKDVGNVGAFLDWGLEKDLLVPFSEQPKPMNKGEKHLVRVYLDR
EECCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEEECC
SERIAASAKLGKFLEKSRIELKEGDEVRLTFYQFGDLGAKVIINDRYDGLLFKSELFGRY
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCEEEHHHHCCEE
EVGTSAKGFVKKIRPDGKIDVTLRKGGGKDLHGSRESVLRVLSERGGFLPVGDKSSPELI
ECCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHH
SEMFSMSKKSFKTVIGNLYKEGVIQITPEGIRLR
HHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]