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The map label for this gene is atoS [C]

Identifier: 308535234

GI number: 308535234

Start: 1599069

End: 1601615

Strand: Reverse

Name: atoS [C]

Synonym: NA

Alternate gene names: 308535234

Gene position: 1601615-1599069 (Counterclockwise)

Preceding gene: 197117775

Following gene: 197117770

Centisome position: 34.7

GC content: 62.7

Gene sequence:

>2547_bases
GTGTCACAGAGAACTCCAGATCCAAAAATCGGCAGCGCCTTCCAAAGCAAATCGCGCTCGCTTGGCCTGTGGCTGAGCCC
TTTATTGATGCTGGGCGCCTTGCTGCTGGTGTTCGCCGTCATCATCTGGTTCATCGAAGGGAACAACCGGAAGAGCAAGC
AGAGCGACCTGAGTTCCAGGGCGAAAACCATCGGCGGAACGGTGCAACTCACCCTGGATGGGAACGAGAGCTACCTGGGC
ATGCTCGCCCTGGAGCAGGCCGCAGGGAAACTGGACCGGCCCCTGTTCCAACAGCGGGCCAGCCGCTACATCAACGAACA
CCCGGAACTGATCAACATCACCTGGGTGGACGCCGGCATGTTCATCCGCGACGTGGCACCTTTGGCCCAGAACCGCCAGA
TACTGGGGCTGCATGTGGACTTGCCGGAGCCCAAGCGCGCCTCACGCCTCGCCAGGGACCTGCGCCTGCCGGTCTACACC
AGCCCCTTCCAGGCCATACAGGGAGTGACCTCCTTTGAAGTATGGGTTCCCGTCTACCGGGACGACACCTTTTTGGGCCT
GTTCGCCGGGGTCTACTCCTGCGAAAAGCTGCTGGAACAGCTGGTCTCGCAGGTCCGTCCGCGCTTATACCACCTGAGCC
TGGTCGACAGGTACGATTCGGTGCTGGCGTCCTACCCAGTCCAGGGGACCCTGGACAAAAACCTGTCCAAGGAGGTGCTC
ATCACCCCCGAGGACAGCGGCGTCGTGCTGCGCATCGAGAGGTATGAGACCGGCTCCGAGTGGCGCCTCATGATTTTGAA
GTTCCTCTCTCTGGCGCTGGTCCCGGGGCTAGGCTACACCCTGTGGAACTTAAAGCGCGAGATGGACGAGCGCAGGCGGG
TCGAGGAGGCGCTCAAAGAGCAGGCGATGACGCTGGAGCAGGAGGTCAGGGAGCGCAAGGCCGCGCAGGAGCATCTGCAG
GACCAGGCGGTCCTTCTGGAGGAGCAGATCGACGAACGCTGGCAGGCGGAAGAGGCGCTTAGGGCAAGCGAAGAAAGACT
GCGCCTCTTGCTCGATTCAGCGGGGGAGGCGATCTACGGCATAGACCTTGAGGGAAACTGCACCTTCTGCAACAAAGCCT
GCCTCAGGATGCTGGGAGCCGACTCCCCGGAGCAGTACCTGGGGCGCAACATGCACGAGATCATCCACCACTCCTACCCC
GACGGCACCCCGATGCCCCGAAAGGAGTGCATGGTGCACCAGACCTTGCGGGAGGAGCAGGGATGCCACGTGAACGACGA
GGTCTTCTGGCGCGCGGACGGTAGCAGCTTTCCGGTCGAGTACTGGTCCCATCCCCAGGTGAAGGGGGGGAAGGTGGTGG
GCGCAGTCGTCGCCTTCATCGACATCACGGACCGCAAGCGCCTGGAGGAACAGTACCGCCAGTCGCAGAAGATGGAATCG
GTGGGGCGGCTGGCCGGGGGGGTGGCGCACGACTTCAACAACATGCTGAGCGTCATCCTGGGAGCCGCGGAATTGAGCAG
ACGCAAGCTGGAGGAAGGCGAGCCGATAGACGCCTACCTGGAGGTGATCACCAACGCCGCCAAGCGCTCCAGCGAGATCA
CCCGGCAGCTCCTCGCCTTCTCGCGCAAGGAGGTAGTTTCGCCCCGTCCGCTGGACCTGAACCAGCTGATCCGGGAGTCC
AACAAGATCCTGGCCAGGCTGATCAGCGAGGACATAAACCTCTCTTTCACTCCCGACCCGGGGCTTTGGCTCGTCTCTAT
CGACCCTTCCCAGGTGGACCAGATCCTGATGAACCTGGCGGTGAACGCCCGCGACGCCATGCCCAACGGCGGCAGGCTCA
GCATAGAGACCAGGAACCTCCGCCTGACCGGCGATTGCAGCCACGTCCACCCCGACGCGCATCCCGGTGATTACGTGCAG
CTGACGGTGAGCGACACCGGGCAGGGGATGGACAAGGCGACGGTCGAGCACATCTTCGAGCCTTTTTTCACCACCAAGGA
ACTGGGCAAGGGGACGGGGCTCGGGCTTGCGACCGTCTACGGCATCGTCACCCAGAACAGGGGTTTCATCAACGTGTACA
GCGAACCGGGCCAGGGGACCGTGTTCAGGATCAACCTGCCGCGACTGGCGGACCAGGCCGATGGGGCTTCCGGCCAGGAG
CAGGCGGCGCCGGCGCTGTCGGGAACGGTACTGCTCGTCGAGGACGAGGAGATGCTGCTCTGGCTGGCGACGAAGCTTTT
GGAGGAGCTGGGGTTCAGCGTGATCCAGGCGCCGGGCCCGCGGGAGGCGATCGCGATCTGCGAGGACCCGGGACTGAACC
TCGACCTCATCCTGACCGACGTGGTGATGCCGGAGATGAACGGCAGCGAGATGGTAGCGAAGATCAAGCAGACCCGCCCC
GATCAGAAGGTGCTCTTCATGTCCGGTTACACCTCTGACGACGTGGTGCAGCGCGGCATCCTGGAACAGGGGATGCAGTA
CATCCAAAAACCTCTGGACCTTCGCGAACTGGGAGAGAAAATCGGACAGATACTGGCGGGAAACTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: CHASE/PAS domain-containing sensor histidine kinase response regulator

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 848; Mature: 847

Protein sequence:
NA

Sequences:

>Translated_848_residues
MSQRTPDPKIGSAFQSKSRSLGLWLSPLLMLGALLLVFAVIIWFIEGNNRKSKQSDLSSRAKTIGGTVQLTLDGNESYLG
MLALEQAAGKLDRPLFQQRASRYINEHPELINITWVDAGMFIRDVAPLAQNRQILGLHVDLPEPKRASRLARDLRLPVYT
SPFQAIQGVTSFEVWVPVYRDDTFLGLFAGVYSCEKLLEQLVSQVRPRLYHLSLVDRYDSVLASYPVQGTLDKNLSKEVL
ITPEDSGVVLRIERYETGSEWRLMILKFLSLALVPGLGYTLWNLKREMDERRRVEEALKEQAMTLEQEVRERKAAQEHLQ
DQAVLLEEQIDERWQAEEALRASEERLRLLLDSAGEAIYGIDLEGNCTFCNKACLRMLGADSPEQYLGRNMHEIIHHSYP
DGTPMPRKECMVHQTLREEQGCHVNDEVFWRADGSSFPVEYWSHPQVKGGKVVGAVVAFIDITDRKRLEEQYRQSQKMES
VGRLAGGVAHDFNNMLSVILGAAELSRRKLEEGEPIDAYLEVITNAAKRSSEITRQLLAFSRKEVVSPRPLDLNQLIRES
NKILARLISEDINLSFTPDPGLWLVSIDPSQVDQILMNLAVNARDAMPNGGRLSIETRNLRLTGDCSHVHPDAHPGDYVQ
LTVSDTGQGMDKATVEHIFEPFFTTKELGKGTGLGLATVYGIVTQNRGFINVYSEPGQGTVFRINLPRLADQADGASGQE
QAAPALSGTVLLVEDEEMLLWLATKLLEELGFSVIQAPGPREAIAICEDPGLNLDLILTDVVMPEMNGSEMVAKIKQTRP
DQKVLFMSGYTSDDVVQRGILEQGMQYIQKPLDLRELGEKIGQILAGN
>Mature_847_residues
SQRTPDPKIGSAFQSKSRSLGLWLSPLLMLGALLLVFAVIIWFIEGNNRKSKQSDLSSRAKTIGGTVQLTLDGNESYLGM
LALEQAAGKLDRPLFQQRASRYINEHPELINITWVDAGMFIRDVAPLAQNRQILGLHVDLPEPKRASRLARDLRLPVYTS
PFQAIQGVTSFEVWVPVYRDDTFLGLFAGVYSCEKLLEQLVSQVRPRLYHLSLVDRYDSVLASYPVQGTLDKNLSKEVLI
TPEDSGVVLRIERYETGSEWRLMILKFLSLALVPGLGYTLWNLKREMDERRRVEEALKEQAMTLEQEVRERKAAQEHLQD
QAVLLEEQIDERWQAEEALRASEERLRLLLDSAGEAIYGIDLEGNCTFCNKACLRMLGADSPEQYLGRNMHEIIHHSYPD
GTPMPRKECMVHQTLREEQGCHVNDEVFWRADGSSFPVEYWSHPQVKGGKVVGAVVAFIDITDRKRLEEQYRQSQKMESV
GRLAGGVAHDFNNMLSVILGAAELSRRKLEEGEPIDAYLEVITNAAKRSSEITRQLLAFSRKEVVSPRPLDLNQLIRESN
KILARLISEDINLSFTPDPGLWLVSIDPSQVDQILMNLAVNARDAMPNGGRLSIETRNLRLTGDCSHVHPDAHPGDYVQL
TVSDTGQGMDKATVEHIFEPFFTTKELGKGTGLGLATVYGIVTQNRGFINVYSEPGQGTVFRINLPRLADQADGASGQEQ
AAPALSGTVLLVEDEEMLLWLATKLLEELGFSVIQAPGPREAIAICEDPGLNLDLILTDVVMPEMNGSEMVAKIKQTRPD
QKVLFMSGYTSDDVVQRGILEQGMQYIQKPLDLRELGEKIGQILAGN

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=379, Percent_Identity=27.9683377308707, Blast_Score=127, Evalue=3e-30,
Organism=Escherichia coli, GI1790436, Length=247, Percent_Identity=31.5789473684211, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI48994928, Length=559, Percent_Identity=25.5813953488372, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI145693157, Length=309, Percent_Identity=25.5663430420712, Blast_Score=81, Evalue=4e-16,
Organism=Escherichia coli, GI1790300, Length=376, Percent_Identity=24.2021276595745, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1786912, Length=249, Percent_Identity=28.5140562248996, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1788713, Length=307, Percent_Identity=25.0814332247557, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1790346, Length=244, Percent_Identity=29.5081967213115, Blast_Score=69, Evalue=2e-12,
Organism=Escherichia coli, GI87081816, Length=374, Percent_Identity=22.4598930481283, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 94911; Mature: 94780

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50839 CHASE ; PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRTPDPKIGSAFQSKSRSLGLWLSPLLMLGALLLVFAVIIWFIEGNNRKSKQSDLSSR
CCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHH
AKTIGGTVQLTLDGNESYLGMLALEQAAGKLDRPLFQQRASRYINEHPELINITWVDAGM
HHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCH
FIRDVAPLAQNRQILGLHVDLPEPKRASRLARDLRLPVYTSPFQAIQGVTSFEVWVPVYR
HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEEEEC
DDTFLGLFAGVYSCEKLLEQLVSQVRPRLYHLSLVDRYDSVLASYPVQGTLDKNLSKEVL
CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
ITPEDSGVVLRIERYETGSEWRLMILKFLSLALVPGLGYTLWNLKREMDERRRVEEALKE
EEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QAMTLEQEVRERKAAQEHLQDQAVLLEEQIDERWQAEEALRASEERLRLLLDSAGEAIYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
IDLEGNCTFCNKACLRMLGADSPEQYLGRNMHEIIHHSYPDGTPMPRKECMVHQTLREEQ
EECCCCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
GCHVNDEVFWRADGSSFPVEYWSHPQVKGGKVVGAVVAFIDITDRKRLEEQYRQSQKMES
CCCCCCCEEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VGRLAGGVAHDFNNMLSVILGAAELSRRKLEEGEPIDAYLEVITNAAKRSSEITRQLLAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SRKEVVSPRPLDLNQLIRESNKILARLISEDINLSFTPDPGLWLVSIDPSQVDQILMNLA
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECHHHHHHHHHHHH
VNARDAMPNGGRLSIETRNLRLTGDCSHVHPDAHPGDYVQLTVSDTGQGMDKATVEHIFE
CCHHCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
PFFTTKELGKGTGLGLATVYGIVTQNRGFINVYSEPGQGTVFRINLPRLADQADGASGQE
HHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCHHHCCCCCCCCHH
QAAPALSGTVLLVEDEEMLLWLATKLLEELGFSVIQAPGPREAIAICEDPGLNLDLILTD
HCCCCCCCEEEEEECCHHHHHHHHHHHHHHCHHEECCCCCCCEEEEECCCCCCEEEEEEH
VVMPEMNGSEMVAKIKQTRPDQKVLFMSGYTSDDVVQRGILEQGMQYIQKPLDLRELGEK
HHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IGQILAGN
HHHHHCCC
>Mature Secondary Structure 
SQRTPDPKIGSAFQSKSRSLGLWLSPLLMLGALLLVFAVIIWFIEGNNRKSKQSDLSSR
CCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHH
AKTIGGTVQLTLDGNESYLGMLALEQAAGKLDRPLFQQRASRYINEHPELINITWVDAGM
HHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCH
FIRDVAPLAQNRQILGLHVDLPEPKRASRLARDLRLPVYTSPFQAIQGVTSFEVWVPVYR
HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEEEEC
DDTFLGLFAGVYSCEKLLEQLVSQVRPRLYHLSLVDRYDSVLASYPVQGTLDKNLSKEVL
CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
ITPEDSGVVLRIERYETGSEWRLMILKFLSLALVPGLGYTLWNLKREMDERRRVEEALKE
EEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QAMTLEQEVRERKAAQEHLQDQAVLLEEQIDERWQAEEALRASEERLRLLLDSAGEAIYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
IDLEGNCTFCNKACLRMLGADSPEQYLGRNMHEIIHHSYPDGTPMPRKECMVHQTLREEQ
EECCCCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
GCHVNDEVFWRADGSSFPVEYWSHPQVKGGKVVGAVVAFIDITDRKRLEEQYRQSQKMES
CCCCCCCEEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VGRLAGGVAHDFNNMLSVILGAAELSRRKLEEGEPIDAYLEVITNAAKRSSEITRQLLAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SRKEVVSPRPLDLNQLIRESNKILARLISEDINLSFTPDPGLWLVSIDPSQVDQILMNLA
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECHHHHHHHHHHHH
VNARDAMPNGGRLSIETRNLRLTGDCSHVHPDAHPGDYVQLTVSDTGQGMDKATVEHIFE
CCHHCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
PFFTTKELGKGTGLGLATVYGIVTQNRGFINVYSEPGQGTVFRINLPRLADQADGASGQE
HHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCHHHCCCCCCCCHH
QAAPALSGTVLLVEDEEMLLWLATKLLEELGFSVIQAPGPREAIAICEDPGLNLDLILTD
HCCCCCCCEEEEEECCHHHHHHHHHHHHHHCHHEECCCCCCCEEEEECCCCCCEEEEEEH
VVMPEMNGSEMVAKIKQTRPDQKVLFMSGYTSDDVVQRGILEQGMQYIQKPLDLRELGEK
HHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IGQILAGN
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA