Click here to switch to the map view.

The map label for this gene is cheD-1 [H]

Identifier: 197117770

GI number: 197117770

Start: 1598421

End: 1599026

Strand: Reverse

Name: cheD-1 [H]

Synonym: Gbem_1382

Alternate gene names: 197117770

Gene position: 1599026-1598421 (Counterclockwise)

Preceding gene: 308535234

Following gene: 197117769

Centisome position: 34.65

GC content: 60.89

Gene sequence:

>606_bases
GTGAGGATCGTGAAGATTGAAGAGTATCAAAAAGGGGAGCGGGTGACCATCTCCCCTGGCGAATATTATGTGACGGCAAA
GCCGGGGGTGATCTCCACTTTGCTCGGCTCCTGCATCGCCGTCTGCCTCTATGACCGCGGGCGGCGCCTGATCGGGATGA
ACCACTTCATGCTGAGCAACCCCCGCTACTCCAGGGATCTGCCGTTGAACACCACGGACGCGGGGCGCTATGGGATCCAC
GCCATGGACCTGCTGATCAACGCCATGATGAAGAAGGGCACCTGCCGTCACGAGCTGCGGGCCAAGGTCTTCGGCGGCGC
CACCATCATCAACCCGGATTCGCCGCACGACAACTTCTTCTGCGTGGGACAGGTGAACTGCAGGTTCATCCTGCAGTACC
TGGAGAAGGAGGCGATACCGGTCGACGCCATGGACCTGGGGGGAGACTTCGGCCGGGTGATCCACTTCTCCAACGGGGAT
TTCGCGGTGCACCGCAGGAAAGTGGATTCGCTTCGCAGCGACAAGCTGGCCAAGCGCGACCGGTACTGCTGGCAAACGGC
GATCGAGCAGCAGCAAGCCGCCCTCACCGAGATCGACCTTTGGTAA

Upstream 100 bases:

>100_bases
ACCTCTGGACCTTCGCGAACTGGGAGAGAAAATCGGACAGATACTGGCGGGAAACTGAGACGGTGATGGCGGCGAAGACT
ACAGGAACGGAAAGGGCCGG

Downstream 100 bases:

>100_bases
TGGTACGCTGCCCGGCAGCTGCTCGTCCCTCCCACCTCGCCGAACGGCCTCAGCCTTGAGCGCCTCTTGATAGCTACCTT
CCTGCACGGTCACCACAACA

Product: bifunctional chemotaxis protein-glutamine deamidase/protein-glutamate methylesterase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MRIVKIEEYQKGERVTISPGEYYVTAKPGVISTLLGSCIAVCLYDRGRRLIGMNHFMLSNPRYSRDLPLNTTDAGRYGIH
AMDLLINAMMKKGTCRHELRAKVFGGATIINPDSPHDNFFCVGQVNCRFILQYLEKEAIPVDAMDLGGDFGRVIHFSNGD
FAVHRRKVDSLRSDKLAKRDRYCWQTAIEQQQAALTEIDLW

Sequences:

>Translated_201_residues
MRIVKIEEYQKGERVTISPGEYYVTAKPGVISTLLGSCIAVCLYDRGRRLIGMNHFMLSNPRYSRDLPLNTTDAGRYGIH
AMDLLINAMMKKGTCRHELRAKVFGGATIINPDSPHDNFFCVGQVNCRFILQYLEKEAIPVDAMDLGGDFGRVIHFSNGD
FAVHRRKVDSLRSDKLAKRDRYCWQTAIEQQQAALTEIDLW
>Mature_201_residues
MRIVKIEEYQKGERVTISPGEYYVTAKPGVISTLLGSCIAVCLYDRGRRLIGMNHFMLSNPRYSRDLPLNTTDAGRYGIH
AMDLLINAMMKKGTCRHELRAKVFGGATIINPDSPHDNFFCVGQVNCRFILQYLEKEAIPVDAMDLGGDFGRVIHFSNGD
FAVHRRKVDSLRSDKLAKRDRYCWQTAIEQQQAALTEIDLW

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 22846; Mature: 22846

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVKIEEYQKGERVTISPGEYYVTAKPGVISTLLGSCIAVCLYDRGRRLIGMNHFMLSN
CEEEEECCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCEEEECC
PRYSRDLPLNTTDAGRYGIHAMDLLINAMMKKGTCRHELRAKVFGGATIINPDSPHDNFF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCEE
CVGQVNCRFILQYLEKEAIPVDAMDLGGDFGRVIHFSNGDFAVHRRKVDSLRSDKLAKRD
EEECCCHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHH
RYCWQTAIEQQQAALTEIDLW
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRIVKIEEYQKGERVTISPGEYYVTAKPGVISTLLGSCIAVCLYDRGRRLIGMNHFMLSN
CEEEEECCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCEEEECC
PRYSRDLPLNTTDAGRYGIHAMDLLINAMMKKGTCRHELRAKVFGGATIINPDSPHDNFF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCEE
CVGQVNCRFILQYLEKEAIPVDAMDLGGDFGRVIHFSNGDFAVHRRKVDSLRSDKLAKRD
EEECCCHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHH
RYCWQTAIEQQQAALTEIDLW
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA