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The map label for this gene is 197117775

Identifier: 197117775

GI number: 197117775

Start: 1603233

End: 1604141

Strand: Reverse

Name: 197117775

Synonym: Gbem_1387

Alternate gene names: NA

Gene position: 1604141-1603233 (Counterclockwise)

Preceding gene: 197117776

Following gene: 308535234

Centisome position: 34.76

GC content: 59.19

Gene sequence:

>909_bases
ATGGAAAATTTCGCCATGATCGGGGCCTTTGTCCTTTTGGGGATGCTCTTTCGCCGCACCGGGTTTTTTCCAAAAGATTC
AGCCCAGGTACTCAACATCTTCGCCCTTTACGTATCACTGCCGGCGGTGATACTGCTCAAGGTGCCGCAGATCGTCTTTT
CTCCAGAGATCGCCATTGCGGCGGCGCTTCCGTGGGGGTTGCTTGCTTTTTCCGCCTCTCTGGTGCTTTTGGCGGCGAGA
CTTTGGAACTGGGAGCGGCCGGTTACCGGAGTGCTGCTTCTGGTCGTGCCGCTGGGAAACACTTCTTTTCTCGGCATCCC
GATGGTACAGGCTTTCTTCGGACCGGCAGGGCTTCCCTACCTGATCATCTACGACCAGATCGGCACCATGGTCATCATGG
CAACCTACGGCTCCTTCATTCTTGCGGCGTACGGGAAAAACGGCGCGCTGAACCTCTCCGCTGTGGCCAGAAAAGCCCTG
CTGTTCCCGCCCACGCTGGCCCTGATCGTCGGCCTTGCCTGCCGATTCTGTCCCTATCCGAAAATACTCGTGCAGTGCCT
TGAGAGCGTCGCAACCACCCTGGTCCCAGTCGTCATGACCGCCATAGGGCTGCAGCTGAGGTTCAGGCTTCCGGCAACGG
TAGTCGCCCCGCTTGGATTCGGATTGGGCATCAAGCTTTTGATCGCTCCCCTGGCCGCCTTGCTTGTTTGCCGGCTGGCC
GGCATAAGCGGGATGGTGGTCGACGTCTCGATACTGGAAGCGGCCATGCCTCCTATGGTTACCGCAGGCGCCCTGGCAGT
CGTCGCCGGGATGGATCCCGATCTGGCAGTGGCCCTGATCGGGATCGGCATAATAGTTTCGTTTGCTACCCTACCGGCGA
TCTTCTGGCTGTCGAGGCTTGCGGCGTGA

Upstream 100 bases:

>100_bases
TCATGCTGCGGACACGCAACACGCTTTTGGCCATGGTGTTGGGAATGGCGGTGATCTTCGCCGCCCGCAGGTTGACGCCG
TAAATGGCGGGGACACGCTG

Downstream 100 bases:

>100_bases
AGCTGAAAAAAGGGGGGCCGCTTTTCAGCGGTCCCCCTTCCCTTCGCCTGACCCGGTTGCGGTCAGCCCCTATGTCAGTG
GTAGAGCTCCTCTTTGGACT

Product: membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MENFAMIGAFVLLGMLFRRTGFFPKDSAQVLNIFALYVSLPAVILLKVPQIVFSPEIAIAAALPWGLLAFSASLVLLAAR
LWNWERPVTGVLLLVVPLGNTSFLGIPMVQAFFGPAGLPYLIIYDQIGTMVIMATYGSFILAAYGKNGALNLSAVARKAL
LFPPTLALIVGLACRFCPYPKILVQCLESVATTLVPVVMTAIGLQLRFRLPATVVAPLGFGLGIKLLIAPLAALLVCRLA
GISGMVVDVSILEAAMPPMVTAGALAVVAGMDPDLAVALIGIGIIVSFATLPAIFWLSRLAA

Sequences:

>Translated_302_residues
MENFAMIGAFVLLGMLFRRTGFFPKDSAQVLNIFALYVSLPAVILLKVPQIVFSPEIAIAAALPWGLLAFSASLVLLAAR
LWNWERPVTGVLLLVVPLGNTSFLGIPMVQAFFGPAGLPYLIIYDQIGTMVIMATYGSFILAAYGKNGALNLSAVARKAL
LFPPTLALIVGLACRFCPYPKILVQCLESVATTLVPVVMTAIGLQLRFRLPATVVAPLGFGLGIKLLIAPLAALLVCRLA
GISGMVVDVSILEAAMPPMVTAGALAVVAGMDPDLAVALIGIGIIVSFATLPAIFWLSRLAA
>Mature_302_residues
MENFAMIGAFVLLGMLFRRTGFFPKDSAQVLNIFALYVSLPAVILLKVPQIVFSPEIAIAAALPWGLLAFSASLVLLAAR
LWNWERPVTGVLLLVVPLGNTSFLGIPMVQAFFGPAGLPYLIIYDQIGTMVIMATYGSFILAAYGKNGALNLSAVARKAL
LFPPTLALIVGLACRFCPYPKILVQCLESVATTLVPVVMTAIGLQLRFRLPATVVAPLGFGLGIKLLIAPLAALLVCRLA
GISGMVVDVSILEAAMPPMVTAGALAVVAGMDPDLAVALIGIGIIVSFATLPAIFWLSRLAA

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 31791; Mature: 31791

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENFAMIGAFVLLGMLFRRTGFFPKDSAQVLNIFALYVSLPAVILLKVPQIVFSPEIAIA
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AALPWGLLAFSASLVLLAARLWNWERPVTGVLLLVVPLGNTSFLGIPMVQAFFGPAGLPY
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEECCCCCCCHHHHHHHHHCCCCCCE
LIIYDQIGTMVIMATYGSFILAAYGKNGALNLSAVARKALLFPPTLALIVGLACRFCPYP
EEEEECHHHEEHHHHHHHHHEEEECCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCH
KILVQCLESVATTLVPVVMTAIGLQLRFRLPATVVAPLGFGLGIKLLIAPLAALLVCRLA
HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GISGMVVDVSILEAAMPPMVTAGALAVVAGMDPDLAVALIGIGIIVSFATLPAIFWLSRL
CCCCCEEHHHHHHHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AA
CC
>Mature Secondary Structure
MENFAMIGAFVLLGMLFRRTGFFPKDSAQVLNIFALYVSLPAVILLKVPQIVFSPEIAIA
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AALPWGLLAFSASLVLLAARLWNWERPVTGVLLLVVPLGNTSFLGIPMVQAFFGPAGLPY
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEECCCCCCCHHHHHHHHHCCCCCCE
LIIYDQIGTMVIMATYGSFILAAYGKNGALNLSAVARKALLFPPTLALIVGLACRFCPYP
EEEEECHHHEEHHHHHHHHHEEEECCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCH
KILVQCLESVATTLVPVVMTAIGLQLRFRLPATVVAPLGFGLGIKLLIAPLAALLVCRLA
HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GISGMVVDVSILEAAMPPMVTAGALAVVAGMDPDLAVALIGIGIIVSFATLPAIFWLSRL
CCCCCEEHHHHHHHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]