Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is glgP [H]

Identifier: 197120181

GI number: 197120181

Start: 4360029

End: 4362581

Strand: Direct

Name: glgP [H]

Synonym: Gbem_3820

Alternate gene names: 197120181

Gene position: 4360029-4362581 (Clockwise)

Preceding gene: 197120180

Following gene: 197120224

Centisome position: 94.47

GC content: 64.98

Gene sequence:

>2553_bases
ATGAACCTGAGCTCAACGCTGCACAGATTTACCGTCGTCCCCTCGCTTCCCAAGGAGCTTGCCGGGCTGCAGCGCATCGC
CTACAACCTCTGGTGGAGCTGGGAACCCGAAGCCATCGGCCTTTTCAAACGACTGGACCCCGAACTCTGGCGCCTGACGC
GCCACAACCCCCTCGAGGTGCTGGGAAGCCTGCAGCAGGCGACCTTCGAGAGCCTCATGGCGGACGAGGGGTTCATGTCC
CACCTCTCGCAGGTAGAGGAACGCCTTACCGAATACCTCTCCTCCCACACCTGGTATGAGCGGCACGGCAACTCCGGCGC
CCGCATCGCCTACTTCTCCATGGAATTCGGCCTGCACGAGTCGCTCCCCATCTACTCCGGGGGGCTCGGCATCCTCGCGG
GCGACCACCTCAAATCCGCCAGCGATTTAGGGCTCCCTCTGGTCGGTGTCGGGCTTTTGTACCGCCAGGGGTACTTCCGC
CAGTACCTGAACCTGGAAGGGTGGCAGCAGGAAATCTACCCCGAAAACGACTTCTACAACCTCCCGCTGCACCAGGAGAA
GGACAGGGATGGAAAGCCCGTGGCGTTCTCCCTGGAGTACCCGGGGAGAAACGTGCGGGTGCAGGTCTGGCGGGTGCAGG
TAGGCCGCGTCAACCTCTACCTTCTTGACACGAACCTCGAGGAGAATGCCCCCGCCGACCGTGAAATTACCACCAGGCTC
TACGGCGGCGACCAGGAGTTGCGGATCAGGCAGGAAATCCTGCTCGGCATCGGCGGCATCCGGGCGCTGAGGCTTTTGGG
GGCCGAGCCCAACGTCTGCCACATGAACGAGGGGCACGCCGCCTTCCTGGCGCTGGAGCGGATCCGCTCCCTGATGGAGC
AGCGCCAGCTCACCTTCCGGGAGGCGATGGAGGCGGTGAGAGGCGGCAACGTCTTCACCACCCACACGCCGGTTGAGGCC
GGGATCGACCATTTCCCCCCCGATCTACTCGACCAGTACATGGGGCATTACTACAGAAACCTGGGGCTTTCCCGCGAGCA
GTTCATGGCCCTGGGGATGCAGAACCACGGCAGGAGCAACGAAAGCTTCTGCATGGCGGTGCTCGCCATGAAGCTCTCGC
TCCACTCAAACGGGGTAAGCGAACTGCACGGGGAGGTGTCGCGCAGGATGTGGGCGGACGTCTGGCCGGACCTCCCCGAG
GAACAGCTGCCGCTTACCTACGTCACCAACGGGGTGCACCAGAAGAGCTGGCTCTCGGAGGAGATGACCGGCCTGTTGAT
CCGGTTCCTCGGCACCAGGTGGTTGGAACAAAGCGCCGATCAGCTCTGGCGCAGGGTCTCGCGCATCCCGGACGCGGAGC
TTTGGCGCACGCACCGGCGCGGCACCGAGCAGCTGGTCGACTACGCCCGCCGCAGCTTGAGGGCGCAGCTGGAGAAGCTC
GACGCCTCCGCCAAGGAGATCGACGCGGCAGGCGACGTCCTGGACCCGGAGATACTCACCATCGGCTTCGCGCGCCGCTT
CGCCACCTACAAGCGCGGGACGCTCCTGTTGCACGACAAGGAGCGGCTCTTCAGGATACTGAACCACCCCGAGCGGCCGG
TGCAGATCGTATTCGCCGGGAAGGCACACCCCGCCGACCACCAGGGAAAGGAGCTGATCCGCCAGATCGTGCAGCTGTCG
CAGCAGCCCGAGTTCCGGCGCCGCATCGTCTTTTTGGAGGATTACGACATCTCGGTGGCCCGGCGCCTGGTGCAGGGGGT
GGACATCTGGCTCAACACGCCGCTCAGGCCCCTGGAGGCCAGCGGCACCAGCGGGATGAAGGTCGCCTTCAACGGCGGCC
TCAACCTGAGCATCCTGGACGGCTGGTGGTGCGAGGGGTACCGCGGGAACAACGGCTGGGCCATAGGGCGCGGCGAGGTG
TACGACGACCTGGCCTACCAGAACCAGGTGGAGAGCCGCGCCATCTACGACCTTCTGGAGAAGGAGATCGTGCCCCTTTT
CTACAACCGGGGGAACGACGGCATCCCGCGCGGCTGGACCACCTTCATGAAGAGCTCCATGCAGACGCTCTGCCCGGTGT
TCAGCACGGACCGGATGGTGCAGGAGTACGCAAGGCGCTGCTACCTTCCCGCCTTCGAACACTGGGAGCGGCTGAACCGC
GACGACCTGCGGCTTGCGGTGGAGCTGGCGCGCTGGAAGGAGCGGCTGCACGGCATGTGGGGGGAGCTTTCCATCGTGGC
GGTCCACGCCGAGATCCAGAAGGAGGTGATGGTGGGGGAGATGCTACCCATCTCGGTGCAGATCACGCCGGGGCGGATCC
CGCTTTCCGAGATCGCGGTGGAGGTCTATTTCGGGGTGCTCGATTCCCGCGGCGCCATCATCGGGGGGGAGATCGTGCCG
CTTACGCCGGTGGCAGACCCGGAAAAGGCGGGGCACTTCGGCGGCGAACTGGAGTGCCGCTTCTGCGGGCGGCACGGCTT
CATGCTGCGGGTAATGCCCAGGCACCCGGAGCTTGGGACCGTGTACGATCCGGGGCTGATACTCTGGGGTTAG

Upstream 100 bases:

>100_bases
CGGCACCACTACTCGGTATGAGCTACAAGACGCTGCAATACCGGTTGGAAAAATTCGGCATCGGCAAACCGGAGTAGCCT
CAAGTAGCCAGGAGCGCGGT

Downstream 100 bases:

>100_bases
GCGGGAAGGGTCAAGGAGAGGCGAAACGAAAAAGGTGGGGCGCGAGCCTCACCTTTTTTTGAGGCTGTAGACGTAGGCGA
GGATCTCGGCGACGGCGGCG

Product: alpha-glucan phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 850; Mature: 850

Protein sequence:

>850_residues
MNLSSTLHRFTVVPSLPKELAGLQRIAYNLWWSWEPEAIGLFKRLDPELWRLTRHNPLEVLGSLQQATFESLMADEGFMS
HLSQVEERLTEYLSSHTWYERHGNSGARIAYFSMEFGLHESLPIYSGGLGILAGDHLKSASDLGLPLVGVGLLYRQGYFR
QYLNLEGWQQEIYPENDFYNLPLHQEKDRDGKPVAFSLEYPGRNVRVQVWRVQVGRVNLYLLDTNLEENAPADREITTRL
YGGDQELRIRQEILLGIGGIRALRLLGAEPNVCHMNEGHAAFLALERIRSLMEQRQLTFREAMEAVRGGNVFTTHTPVEA
GIDHFPPDLLDQYMGHYYRNLGLSREQFMALGMQNHGRSNESFCMAVLAMKLSLHSNGVSELHGEVSRRMWADVWPDLPE
EQLPLTYVTNGVHQKSWLSEEMTGLLIRFLGTRWLEQSADQLWRRVSRIPDAELWRTHRRGTEQLVDYARRSLRAQLEKL
DASAKEIDAAGDVLDPEILTIGFARRFATYKRGTLLLHDKERLFRILNHPERPVQIVFAGKAHPADHQGKELIRQIVQLS
QQPEFRRRIVFLEDYDISVARRLVQGVDIWLNTPLRPLEASGTSGMKVAFNGGLNLSILDGWWCEGYRGNNGWAIGRGEV
YDDLAYQNQVESRAIYDLLEKEIVPLFYNRGNDGIPRGWTTFMKSSMQTLCPVFSTDRMVQEYARRCYLPAFEHWERLNR
DDLRLAVELARWKERLHGMWGELSIVAVHAEIQKEVMVGEMLPISVQITPGRIPLSEIAVEVYFGVLDSRGAIIGGEIVP
LTPVADPEKAGHFGGELECRFCGRHGFMLRVMPRHPELGTVYDPGLILWG

Sequences:

>Translated_850_residues
MNLSSTLHRFTVVPSLPKELAGLQRIAYNLWWSWEPEAIGLFKRLDPELWRLTRHNPLEVLGSLQQATFESLMADEGFMS
HLSQVEERLTEYLSSHTWYERHGNSGARIAYFSMEFGLHESLPIYSGGLGILAGDHLKSASDLGLPLVGVGLLYRQGYFR
QYLNLEGWQQEIYPENDFYNLPLHQEKDRDGKPVAFSLEYPGRNVRVQVWRVQVGRVNLYLLDTNLEENAPADREITTRL
YGGDQELRIRQEILLGIGGIRALRLLGAEPNVCHMNEGHAAFLALERIRSLMEQRQLTFREAMEAVRGGNVFTTHTPVEA
GIDHFPPDLLDQYMGHYYRNLGLSREQFMALGMQNHGRSNESFCMAVLAMKLSLHSNGVSELHGEVSRRMWADVWPDLPE
EQLPLTYVTNGVHQKSWLSEEMTGLLIRFLGTRWLEQSADQLWRRVSRIPDAELWRTHRRGTEQLVDYARRSLRAQLEKL
DASAKEIDAAGDVLDPEILTIGFARRFATYKRGTLLLHDKERLFRILNHPERPVQIVFAGKAHPADHQGKELIRQIVQLS
QQPEFRRRIVFLEDYDISVARRLVQGVDIWLNTPLRPLEASGTSGMKVAFNGGLNLSILDGWWCEGYRGNNGWAIGRGEV
YDDLAYQNQVESRAIYDLLEKEIVPLFYNRGNDGIPRGWTTFMKSSMQTLCPVFSTDRMVQEYARRCYLPAFEHWERLNR
DDLRLAVELARWKERLHGMWGELSIVAVHAEIQKEVMVGEMLPISVQITPGRIPLSEIAVEVYFGVLDSRGAIIGGEIVP
LTPVADPEKAGHFGGELECRFCGRHGFMLRVMPRHPELGTVYDPGLILWG
>Mature_850_residues
MNLSSTLHRFTVVPSLPKELAGLQRIAYNLWWSWEPEAIGLFKRLDPELWRLTRHNPLEVLGSLQQATFESLMADEGFMS
HLSQVEERLTEYLSSHTWYERHGNSGARIAYFSMEFGLHESLPIYSGGLGILAGDHLKSASDLGLPLVGVGLLYRQGYFR
QYLNLEGWQQEIYPENDFYNLPLHQEKDRDGKPVAFSLEYPGRNVRVQVWRVQVGRVNLYLLDTNLEENAPADREITTRL
YGGDQELRIRQEILLGIGGIRALRLLGAEPNVCHMNEGHAAFLALERIRSLMEQRQLTFREAMEAVRGGNVFTTHTPVEA
GIDHFPPDLLDQYMGHYYRNLGLSREQFMALGMQNHGRSNESFCMAVLAMKLSLHSNGVSELHGEVSRRMWADVWPDLPE
EQLPLTYVTNGVHQKSWLSEEMTGLLIRFLGTRWLEQSADQLWRRVSRIPDAELWRTHRRGTEQLVDYARRSLRAQLEKL
DASAKEIDAAGDVLDPEILTIGFARRFATYKRGTLLLHDKERLFRILNHPERPVQIVFAGKAHPADHQGKELIRQIVQLS
QQPEFRRRIVFLEDYDISVARRLVQGVDIWLNTPLRPLEASGTSGMKVAFNGGLNLSILDGWWCEGYRGNNGWAIGRGEV
YDDLAYQNQVESRAIYDLLEKEIVPLFYNRGNDGIPRGWTTFMKSSMQTLCPVFSTDRMVQEYARRCYLPAFEHWERLNR
DDLRLAVELARWKERLHGMWGELSIVAVHAEIQKEVMVGEMLPISVQITPGRIPLSEIAVEVYFGVLDSRGAIIGGEIVP
LTPVADPEKAGHFGGELECRFCGRHGFMLRVMPRHPELGTVYDPGLILWG

Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [

COG id: COG0058

COG function: function code G; Glucan phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycogen phosphorylase family [H]

Homologues:

Organism=Homo sapiens, GI21361370, Length=582, Percent_Identity=24.0549828178694, Blast_Score=89, Evalue=2e-17,
Organism=Homo sapiens, GI5032009, Length=583, Percent_Identity=23.4991423670669, Blast_Score=87, Evalue=6e-17,
Organism=Homo sapiens, GI257900462, Length=453, Percent_Identity=22.9580573951435, Blast_Score=82, Evalue=2e-15,
Organism=Escherichia coli, GI2367228, Length=567, Percent_Identity=25.7495590828924, Blast_Score=108, Evalue=2e-24,
Organism=Escherichia coli, GI48994936, Length=569, Percent_Identity=23.1985940246046, Blast_Score=83, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17564550, Length=592, Percent_Identity=23.4797297297297, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI32566204, Length=592, Percent_Identity=23.4797297297297, Blast_Score=101, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6325418, Length=474, Percent_Identity=22.3628691983122, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI78706832, Length=483, Percent_Identity=22.9813664596273, Blast_Score=81, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24581010, Length=483, Percent_Identity=22.9813664596273, Blast_Score=81, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011834
- InterPro:   IPR000811 [H]

Pfam domain/function: PF00343 Phosphorylase [H]

EC number: =2.4.1.1 [H]

Molecular weight: Translated: 97316; Mature: 97316

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSSTLHRFTVVPSLPKELAGLQRIAYNLWWSWEPEAIGLFKRLDPELWRLTRHNPLEV
CCCHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHCCCCHHHH
LGSLQQATFESLMADEGFMSHLSQVEERLTEYLSSHTWYERHGNSGARIAYFSMEFGLHE
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEECCCCC
SLPIYSGGLGILAGDHLKSASDLGLPLVGVGLLYRQGYFRQYLNLEGWQQEIYPENDFYN
CCCCCCCCCCEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEE
LPLHQEKDRDGKPVAFSLEYPGRNVRVQVWRVQVGRVNLYLLDTNLEENAPADREITTRL
CCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECEEEEEEEECCCCCCCCCCCHHHHEE
YGGDQELRIRQEILLGIGGIRALRLLGAEPNVCHMNEGHAAFLALERIRSLMEQRQLTFR
ECCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
EAMEAVRGGNVFTTHTPVEAGIDHFPPDLLDQYMGHYYRNLGLSREQFMALGMQNHGRSN
HHHHHHHCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
ESFCMAVLAMKLSLHSNGVSELHGEVSRRMWADVWPDLPEEQLPLTYVTNGVHQKSWLSE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHH
EMTGLLIRFLGTRWLEQSADQLWRRVSRIPDAELWRTHRRGTEQLVDYARRSLRAQLEKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
DASAKEIDAAGDVLDPEILTIGFARRFATYKRGTLLLHDKERLFRILNHPERPVQIVFAG
CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCEEEEEEC
KAHPADHQGKELIRQIVQLSQQPEFRRRIVFLEDYDISVARRLVQGVDIWLNTPLRPLEA
CCCCCCCHHHHHHHHHHHHCCCCCHHHEEEEEECCCHHHHHHHHHHHHHEECCCCCCCCC
SGTSGMKVAFNGGLNLSILDGWWCEGYRGNNGWAIGRGEVYDDLAYQNQVESRAIYDLLE
CCCCCEEEEEECCEEEEEECCEECCCEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
KEIVPLFYNRGNDGIPRGWTTFMKSSMQTLCPVFSTDRMVQEYARRCYLPAFEHWERLNR
HCCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCH
DDLRLAVELARWKERLHGMWGELSIVAVHAEIQKEVMVGEMLPISVQITPGRIPLSEIAV
HHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH
EVYFGVLDSRGAIIGGEIVPLTPVADPEKAGHFGGELECRFCGRHGFMLRVMPRHPELGT
HHHHHHHCCCCCEECCCEEEECCCCCCHHCCCCCCCEEEEEECCCCEEEEEECCCCCCCC
VYDPGLILWG
EECCCEEEEC
>Mature Secondary Structure
MNLSSTLHRFTVVPSLPKELAGLQRIAYNLWWSWEPEAIGLFKRLDPELWRLTRHNPLEV
CCCHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHCCCCHHHH
LGSLQQATFESLMADEGFMSHLSQVEERLTEYLSSHTWYERHGNSGARIAYFSMEFGLHE
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEECCCCC
SLPIYSGGLGILAGDHLKSASDLGLPLVGVGLLYRQGYFRQYLNLEGWQQEIYPENDFYN
CCCCCCCCCCEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEE
LPLHQEKDRDGKPVAFSLEYPGRNVRVQVWRVQVGRVNLYLLDTNLEENAPADREITTRL
CCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECEEEEEEEECCCCCCCCCCCHHHHEE
YGGDQELRIRQEILLGIGGIRALRLLGAEPNVCHMNEGHAAFLALERIRSLMEQRQLTFR
ECCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
EAMEAVRGGNVFTTHTPVEAGIDHFPPDLLDQYMGHYYRNLGLSREQFMALGMQNHGRSN
HHHHHHHCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
ESFCMAVLAMKLSLHSNGVSELHGEVSRRMWADVWPDLPEEQLPLTYVTNGVHQKSWLSE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHH
EMTGLLIRFLGTRWLEQSADQLWRRVSRIPDAELWRTHRRGTEQLVDYARRSLRAQLEKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
DASAKEIDAAGDVLDPEILTIGFARRFATYKRGTLLLHDKERLFRILNHPERPVQIVFAG
CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCEEEEEEC
KAHPADHQGKELIRQIVQLSQQPEFRRRIVFLEDYDISVARRLVQGVDIWLNTPLRPLEA
CCCCCCCHHHHHHHHHHHHCCCCCHHHEEEEEECCCHHHHHHHHHHHHHEECCCCCCCCC
SGTSGMKVAFNGGLNLSILDGWWCEGYRGNNGWAIGRGEVYDDLAYQNQVESRAIYDLLE
CCCCCEEEEEECCEEEEEECCEECCCEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
KEIVPLFYNRGNDGIPRGWTTFMKSSMQTLCPVFSTDRMVQEYARRCYLPAFEHWERLNR
HCCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCH
DDLRLAVELARWKERLHGMWGELSIVAVHAEIQKEVMVGEMLPISVQITPGRIPLSEIAV
HHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH
EVYFGVLDSRGAIIGGEIVPLTPVADPEKAGHFGGELECRFCGRHGFMLRVMPRHPELGT
HHHHHHHCCCCCEECCCEEEECCCCCCHHCCCCCCCEEEEEECCCCEEEEEECCCCCCCC
VYDPGLILWG
EECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]