Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is pssA [H]

Identifier: 197119116

GI number: 197119116

Start: 3172298

End: 3173050

Strand: Reverse

Name: pssA [H]

Synonym: Gbem_2743

Alternate gene names: 197119116

Gene position: 3173050-3172298 (Counterclockwise)

Preceding gene: 197119117

Following gene: 197119115

Centisome position: 68.75

GC content: 62.15

Gene sequence:

>753_bases
ATGCGCAAGGGGATCTATATCCTCCCCAACCTATTCACCGCCGGAAGCCTTTTCGCCGGATTTTACTGCATGGTTTCCAC
CGTCAACGGCGATTTCCGCACCGCCGCGCTCTGGATCCTTGCTTCCTCCATCTTCGACGGCCTGGACGGCAAGGTGGCCC
GCCTGACCGGGACTTCCAGCAAGTTTGGCGTCGAGTTCGACTCTCTAGCCGACGTGGTCTCCTTCGGGGCAGCGCCGGGG
CTGCTCATGTACTGCTGGGCCCTGCGCCCCTTCGGTCGCCTCGGTTGGCTCGCCGGGTTCCTGTTCCTGGCCTGCGCCGC
GCTTAGGCTCGCCCGGTTCAACGTGCAGGTGGACACGGTTGAGAGCAAGCGCTTCGTAGGCCTTCCGACTCCGGCCGCCG
CCAGCATGGTCTCCGCGACGGTGCTCTTCTTCTACCACATGGGTTGGCCCGCCTCTTACAACAAGCTTCTGATCCTGGTC
CTGATCTACTTCCTGGCGCTCCTCATGGTCTCCAACGTCCGCTATAACTCCTTCAAGGACCCGAGCCTCATCAAGCGTCA
GCCGTTCGCCTTTCTGGTCTTGGCGGTGCTCCTTTTGATCGTCATCGCGGCCGAACCGGTGACCATGCTGTTCACCATCT
TCACCTGCTACATCCTTTCGGGGCCGGTCGGATTCGTGCTCACCTACCCGCGCAGACGCAGACTGGAGCGGGCGATGCAC
CGGGCGCACGAGGGGATGAAAAGGCAGCAGTAG

Upstream 100 bases:

>100_bases
CCAGCATAGACGTGGTCATGGGACAGAAAACGGTTGCAGGGGAGACCGTACTGGGGATACTGCCGTGAGTGAAGAAACAC
CTAGAGTCGAAAGGGAAGGG

Downstream 100 bases:

>100_bases
CGCCGCCGCAGGACCGATTTCGGGCACGCTCCTGAGGATGCGCCGCCTGCCGCCAACATCGTTTTAATGATTCAAACGGA
AAAACCGCTTGACAGCAGTC

Product: CDP-diacylglycerol--serine O-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRKGIYILPNLFTAGSLFAGFYCMVSTVNGDFRTAALWILASSIFDGLDGKVARLTGTSSKFGVEFDSLADVVSFGAAPG
LLMYCWALRPFGRLGWLAGFLFLACAALRLARFNVQVDTVESKRFVGLPTPAAASMVSATVLFFYHMGWPASYNKLLILV
LIYFLALLMVSNVRYNSFKDPSLIKRQPFAFLVLAVLLLIVIAAEPVTMLFTIFTCYILSGPVGFVLTYPRRRRLERAMH
RAHEGMKRQQ

Sequences:

>Translated_250_residues
MRKGIYILPNLFTAGSLFAGFYCMVSTVNGDFRTAALWILASSIFDGLDGKVARLTGTSSKFGVEFDSLADVVSFGAAPG
LLMYCWALRPFGRLGWLAGFLFLACAALRLARFNVQVDTVESKRFVGLPTPAAASMVSATVLFFYHMGWPASYNKLLILV
LIYFLALLMVSNVRYNSFKDPSLIKRQPFAFLVLAVLLLIVIAAEPVTMLFTIFTCYILSGPVGFVLTYPRRRRLERAMH
RAHEGMKRQQ
>Mature_250_residues
MRKGIYILPNLFTAGSLFAGFYCMVSTVNGDFRTAALWILASSIFDGLDGKVARLTGTSSKFGVEFDSLADVVSFGAAPG
LLMYCWALRPFGRLGWLAGFLFLACAALRLARFNVQVDTVESKRFVGLPTPAAASMVSATVLFFYHMGWPASYNKLLILV
LIYFLALLMVSNVRYNSFKDPSLIKRQPFAFLVLAVLLLIVIAAEPVTMLFTIFTCYILSGPVGFVLTYPRRRRLERAMH
RAHEGMKRQQ

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=134, Percent_Identity=41.044776119403, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 27824; Mature: 27824

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGIYILPNLFTAGSLFAGFYCMVSTVNGDFRTAALWILASSIFDGLDGKVARLTGTSS
CCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC
KFGVEFDSLADVVSFGAAPGLLMYCWALRPFGRLGWLAGFLFLACAALRLARFNVQVDTV
CCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
ESKRFVGLPTPAAASMVSATVLFFYHMGWPASYNKLLILVLIYFLALLMVSNVRYNSFKD
CCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PSLIKRQPFAFLVLAVLLLIVIAAEPVTMLFTIFTCYILSGPVGFVLTYPRRRRLERAMH
CHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHEEEECHHHHHHHHHHH
RAHEGMKRQQ
HHHHHHCCCC
>Mature Secondary Structure
MRKGIYILPNLFTAGSLFAGFYCMVSTVNGDFRTAALWILASSIFDGLDGKVARLTGTSS
CCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC
KFGVEFDSLADVVSFGAAPGLLMYCWALRPFGRLGWLAGFLFLACAALRLARFNVQVDTV
CCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
ESKRFVGLPTPAAASMVSATVLFFYHMGWPASYNKLLILVLIYFLALLMVSNVRYNSFKD
CCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PSLIKRQPFAFLVLAVLLLIVIAAEPVTMLFTIFTCYILSGPVGFVLTYPRRRRLERAMH
CHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHEEEECHHHHHHHHHHH
RAHEGMKRQQ
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]