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The map label for this gene is yrbE [C]

Identifier: 197119107

GI number: 197119107

Start: 3161513

End: 3162289

Strand: Reverse

Name: yrbE [C]

Synonym: Gbem_2734

Alternate gene names: 197119107

Gene position: 3162289-3161513 (Counterclockwise)

Preceding gene: 197119108

Following gene: 197119106

Centisome position: 68.52

GC content: 62.55

Gene sequence:

>777_bases
GTGACGCAATTTCTGGAACCGCTCGGCAAACGGGTGCTTTATTTCAACCAGGTGCTGGGGGAGATGGTCATCCTCCAGGG
AAAGATACTCTACTTCCTGCGCGAGGCGCCGCGCAACGTGCAGAGCATCCTGACCCAGATGGCCGTGATCGGCTGGGACA
CCCTCCCGGTCGCCTCGGTAATGGCCTTTTTCGTCGGCATGGTGCTGGCGCTGCAGACCGGGGTCGAGCTGCAAAAATAC
GGCGGGCAGAACATCATCGGCGCCATCGTCGGGCATTCCATGGTGCGCGAACTCGGCCCGGTCATGACCAGCTTCCTGGT
CGCCGGGCGCTGCGGCTCCGCCATGGCCGCCGAACTCGGGGTCATGACCGTTTACGAGGAGATCGACGCCCTGAAGACGC
TGGACATCGACCCGGTCCGCTACCTCGCCATGCCCCGTTTCATCGCCTGCATCGTCTGCGTTCCGGCGCTGGTGATCTAC
TCGGATGTGATCGGGATCATCGGGGGAGCGCTGATCAGCAACCTGCACCCCCAGATCTTCGTTTCCTACGCGACCTACTA
CGACAGCCTCACCGATGCGCTGAAGATCAAGGAGATCGGGATCGGCCTCACCAAGTCGGTCGCCTTCGGCTCCATCATCG
CCCTGGTTTCCTGCTACGTCGGTTTCAGCACTTCCGGCGGCGCCCGTGGCATCGGCCAGTCCACCACCAGGTCCGTCGTG
CTGTCGTTCATGCTGATCCTGGTCGCGGACTACATCCTGACCCGGGTGCTCCTGTAG

Upstream 100 bases:

>100_bases
AGCTCAAACTGTTGAAGGGGCTGATCAGCCTGAAGCGCAACGGCGAAGAAGAGGACCTGAGCCTTTTGTGGCTCCCCTTC
GGCCTCAAATGGGGGCATAA

Downstream 100 bases:

>100_bases
CAGCCCGGCCGCGGCCGGTTCGACGCGCCGCAGCAGGTCTTTTGCTGTCTTGTCTTTTGGAGGATTTATGGCTCTTTCGG
TAGAAAAAAAGGTCGGCATG

Product: transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTQFLEPLGKRVLYFNQVLGEMVILQGKILYFLREAPRNVQSILTQMAVIGWDTLPVASVMAFFVGMVLALQTGVELQKY
GGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGSAMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIY
SDVIGIIGGALISNLHPQIFVSYATYYDSLTDALKIKEIGIGLTKSVAFGSIIALVSCYVGFSTSGGARGIGQSTTRSVV
LSFMLILVADYILTRVLL

Sequences:

>Translated_258_residues
MTQFLEPLGKRVLYFNQVLGEMVILQGKILYFLREAPRNVQSILTQMAVIGWDTLPVASVMAFFVGMVLALQTGVELQKY
GGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGSAMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIY
SDVIGIIGGALISNLHPQIFVSYATYYDSLTDALKIKEIGIGLTKSVAFGSIIALVSCYVGFSTSGGARGIGQSTTRSVV
LSFMLILVADYILTRVLL
>Mature_257_residues
TQFLEPLGKRVLYFNQVLGEMVILQGKILYFLREAPRNVQSILTQMAVIGWDTLPVASVMAFFVGMVLALQTGVELQKYG
GQNIIGAIVGHSMVRELGPVMTSFLVAGRCGSAMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYS
DVIGIIGGALISNLHPQIFVSYATYYDSLTDALKIKEIGIGLTKSVAFGSIIALVSCYVGFSTSGGARGIGQSTTRSVVL
SFMLILVADYILTRVLL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=227, Percent_Identity=31.7180616740088, Blast_Score=118, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27832; Mature: 27700

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQFLEPLGKRVLYFNQVLGEMVILQGKILYFLREAPRNVQSILTQMAVIGWDTLPVASV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHH
MAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGSAMAAELG
HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYSDVIGIIGGALISNLHPQIF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VSYATYYDSLTDALKIKEIGIGLTKSVAFGSIIALVSCYVGFSTSGGARGIGQSTTRSVV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LSFMLILVADYILTRVLL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA