| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119106
Identifier: 197119106
GI number: 197119106
Start: 3160375
End: 3161445
Strand: Reverse
Name: 197119106
Synonym: Gbem_2733
Alternate gene names: NA
Gene position: 3161445-3160375 (Counterclockwise)
Preceding gene: 197119107
Following gene: 197119105
Centisome position: 68.5
GC content: 59.38
Gene sequence:
>1071_bases ATGGCTCTTTCGGTAGAAAAAAAGGTCGGCATGTTCTTCCTGTTCGGCCTCATCATCCTGGGTTTGCTCCTAGAGGTGGG TGAAAAGTGGAACCCGTTCGAGAAGAACGTCCCCTATAAGACCTATCTCACCAGCATCACCGGGTTGAAGGTGGGGGACC CGGTGCGGCTCGCCGGCGTGGATGTCGGGCGCATCAAGGGGATCAACATCCTGAACGACAAGATCGAGATCAACTTCGAG GTGAAGCCCGGTACCAGGATCAAGACCGACACTGTTGCGGGACTTAGGCTCACGAACCTTCTGGGCGGCCAGTTCCTGGG GCTTTCCTTCGGCTCGCCGAACGCGTCGCTTCTGGAGCCCGGCGGCGTGGTGAAAGGGAAGGACGTCGCCAACATCGACA TCATCGTCGACAACTTAAGCGACGTGGTGAAGGACGCCAAGGTCTTTGTAAACAACCTGGACCGCAACCAGGACGTAGTA CTGAAGAAGATCTCGGTAATGCTGGACGAGAACCGCGGCAACCTGAAGGAGTCCATCTCCAACATCAACAGCATCACCGG CAAGATGGACCGCGGCGAGGGGTCGCTGGCGCTGCTTTTGAACGAAAGAAAGCTCTTCGACGACGCAAGCGGCGCGGTGG AGAGCCTGAAGGTGGTGGCCGGCAAGATCGAGCGCGGCGAGGGGACCCTCGGGAAGCTGGTCAACGACGACACTGTCTAT CGCGACGCCTCTGCGCTCATCACCGACCTCAGGTCGGGCGCGAAGGACCTGAACGCCGGGTTGAAGGACGTGAAGGAGAT CACCGCCAAGGTGAACCGCGGCGAAGGTACCCTGGGCAAGCTGATCAACGACGAGACGCTCTATGCCGACCTGCGCGAAG CGTCGAAAAACGTGAAGGAAATCACCCAGAAGATCAACTCCGGCCAGGGGACCCTGGGGAAATTGGTCAACGAGGACCAG CTCTACCGCGACACCACCGCCACGCTCAAGAAGACCGAGCGGGCCATGGAAGGTCTCGGAGACGCAGGCCCCATCTCCGT CATCGGCTCCATCGTGGGGACTCTCTTCTAA
Upstream 100 bases:
>100_bases GCGGACTACATCCTGACCCGGGTGCTCCTGTAGCAGCCCGGCCGCGGCCGGTTCGACGCGCCGCAGCAGGTCTTTTGCTG TCTTGTCTTTTGGAGGATTT
Downstream 100 bases:
>100_bases ACAACCGGCTTAAAGTTCAAAGACGGCAGACAGGGGACAGGCTACTGTGGCAAAGGTAGCCTGTCCTTTTTACGCCCCGA CCCGACCCCGGAACACAGAG
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: Mce Family Protein; Virulence Factor MCE-Like Protein-Related Protein; Virulence Factor Mce Family Protein; Mce-Related Protein; ABC-Type Transport System
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MALSVEKKVGMFFLFGLIILGLLLEVGEKWNPFEKNVPYKTYLTSITGLKVGDPVRLAGVDVGRIKGINILNDKIEINFE VKPGTRIKTDTVAGLRLTNLLGGQFLGLSFGSPNASLLEPGGVVKGKDVANIDIIVDNLSDVVKDAKVFVNNLDRNQDVV LKKISVMLDENRGNLKESISNINSITGKMDRGEGSLALLLNERKLFDDASGAVESLKVVAGKIERGEGTLGKLVNDDTVY RDASALITDLRSGAKDLNAGLKDVKEITAKVNRGEGTLGKLINDETLYADLREASKNVKEITQKINSGQGTLGKLVNEDQ LYRDTTATLKKTERAMEGLGDAGPISVIGSIVGTLF
Sequences:
>Translated_356_residues MALSVEKKVGMFFLFGLIILGLLLEVGEKWNPFEKNVPYKTYLTSITGLKVGDPVRLAGVDVGRIKGINILNDKIEINFE VKPGTRIKTDTVAGLRLTNLLGGQFLGLSFGSPNASLLEPGGVVKGKDVANIDIIVDNLSDVVKDAKVFVNNLDRNQDVV LKKISVMLDENRGNLKESISNINSITGKMDRGEGSLALLLNERKLFDDASGAVESLKVVAGKIERGEGTLGKLVNDDTVY RDASALITDLRSGAKDLNAGLKDVKEITAKVNRGEGTLGKLINDETLYADLREASKNVKEITQKINSGQGTLGKLVNEDQ LYRDTTATLKKTERAMEGLGDAGPISVIGSIVGTLF >Mature_355_residues ALSVEKKVGMFFLFGLIILGLLLEVGEKWNPFEKNVPYKTYLTSITGLKVGDPVRLAGVDVGRIKGINILNDKIEINFEV KPGTRIKTDTVAGLRLTNLLGGQFLGLSFGSPNASLLEPGGVVKGKDVANIDIIVDNLSDVVKDAKVFVNNLDRNQDVVL KKISVMLDENRGNLKESISNINSITGKMDRGEGSLALLLNERKLFDDASGAVESLKVVAGKIERGEGTLGKLVNDDTVYR DASALITDLRSGAKDLNAGLKDVKEITAKVNRGEGTLGKLINDETLYADLREASKNVKEITQKINSGQGTLGKLVNEDQL YRDTTATLKKTERAMEGLGDAGPISVIGSIVGTLF
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38301; Mature: 38169
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSVEKKVGMFFLFGLIILGLLLEVGEKWNPFEKNVPYKTYLTSITGLKVGDPVRLAGV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECC DVGRIKGINILNDKIEINFEVKPGTRIKTDTVAGLRLTNLLGGQFLGLSFGSPNASLLEP CHHHCCCCEEECCEEEEEEEECCCCEEECCCHHHHHHHHHHCCCEEEEECCCCCCCEECC GGVVKGKDVANIDIIVDNLSDVVKDAKVFVNNLDRNQDVVLKKISVMLDENRGNLKESIS CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHH NINSITGKMDRGEGSLALLLNERKLFDDASGAVESLKVVAGKIERGEGTLGKLVNDDTVY HHHHHHCCCCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHH RDASALITDLRSGAKDLNAGLKDVKEITAKVNRGEGTLGKLINDETLYADLREASKNVKE HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHH ITQKINSGQGTLGKLVNEDQLYRDTTATLKKTERAMEGLGDAGPISVIGSIVGTLF HHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure ALSVEKKVGMFFLFGLIILGLLLEVGEKWNPFEKNVPYKTYLTSITGLKVGDPVRLAGV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECC DVGRIKGINILNDKIEINFEVKPGTRIKTDTVAGLRLTNLLGGQFLGLSFGSPNASLLEP CHHHCCCCEEECCEEEEEEEECCCCEEECCCHHHHHHHHHHCCCEEEEECCCCCCCEECC GGVVKGKDVANIDIIVDNLSDVVKDAKVFVNNLDRNQDVVLKKISVMLDENRGNLKESIS CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHH NINSITGKMDRGEGSLALLLNERKLFDDASGAVESLKVVAGKIERGEGTLGKLVNDDTVY HHHHHHCCCCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHH RDASALITDLRSGAKDLNAGLKDVKEITAKVNRGEGTLGKLINDETLYADLREASKNVKE HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHH ITQKINSGQGTLGKLVNEDQLYRDTTATLKKTERAMEGLGDAGPISVIGSIVGTLF HHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA