| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119061
Identifier: 197119061
GI number: 197119061
Start: 3109606
End: 3109878
Strand: Reverse
Name: 197119061
Synonym: Gbem_2686
Alternate gene names: NA
Gene position: 3109878-3109606 (Counterclockwise)
Preceding gene: 197119062
Following gene: 197119060
Centisome position: 67.38
GC content: 60.07
Gene sequence:
>273_bases ATGACCCTCGTCGGCACCTTGGGCTTTTGCGCCGGGCTCCTCACCAGCGGGGCGGCGGTGCCCCAGGTCTACAAGACCTA CAAGACCAGGCACGCGCGCGACATTTCCATGTGGCAGCTGGTCATGTTGAGCCTCGGCATGCTGCTCTGGCTCATCTACG GCTCCATGATCGGCGACCTGCCGCTGATCCTCGCCAACACCTTTTCCATTGCGTGCTACGCCTCGCTCATTGCTATGAAG CTCCGCTATGACAGAGAGGATCGAACAAGCTAA
Upstream 100 bases:
>100_bases TCTCCCGCGCCGAACTAGACGAGCGCGAGGTCTCCTCGCTGCGCGGGCTCCTCTCCCAGATAGACTGGGCCTGCTCCGAG TTCAAAGGGAAGAAGGGCGA
Downstream 100 bases:
>100_bases AGTCATCGCACACGGATTTTGCGGATAACGCGGATAACTGCGGATCAAGCTAGAGCAGGGGGGGGGGTTGATCCAAAGTT ATCGATTTTGATCCGCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MTLVGTLGFCAGLLTSGAAVPQVYKTYKTRHARDISMWQLVMLSLGMLLWLIYGSMIGDLPLILANTFSIACYASLIAMK LRYDREDRTS
Sequences:
>Translated_90_residues MTLVGTLGFCAGLLTSGAAVPQVYKTYKTRHARDISMWQLVMLSLGMLLWLIYGSMIGDLPLILANTFSIACYASLIAMK LRYDREDRTS >Mature_89_residues TLVGTLGFCAGLLTSGAAVPQVYKTYKTRHARDISMWQLVMLSLGMLLWLIYGSMIGDLPLILANTFSIACYASLIAMKL RYDREDRTS
Specific function: Unknown
COG id: COG4095
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10009; Mature: 9878
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVGTLGFCAGLLTSGAAVPQVYKTYKTRHARDISMWQLVMLSLGMLLWLIYGSMIGDL CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PLILANTFSIACYASLIAMKLRYDREDRTS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TLVGTLGFCAGLLTSGAAVPQVYKTYKTRHARDISMWQLVMLSLGMLLWLIYGSMIGDL CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PLILANTFSIACYASLIAMKLRYDREDRTS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA