| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is surE
Identifier: 197119060
GI number: 197119060
Start: 3108609
End: 3109355
Strand: Reverse
Name: surE
Synonym: Gbem_2685
Alternate gene names: 197119060
Gene position: 3109355-3108609 (Counterclockwise)
Preceding gene: 197119061
Following gene: 308535315
Centisome position: 67.37
GC content: 61.04
Gene sequence:
>747_bases GTGAAGATTCTCCTTACCAATGACGACGGGGTGCATTCTCCCGGTCTCGCCGCGCTCATCAAGAAGGTTTCCGAGGTGGC CGAGGTCGTAGTAGTGGCCCCGGACCGGGAACAAAGCGCCGTCTCCCACGCGCTCACCCTGCATCACCCGTTAAGAGCGG CACGCATCGGCGCCAACGTCTTCTCCGTCGAGGGGACACCTACAGACTGCGTCAACCTAGGCATTCACAGCCTTTTGTCG TACCGCCCGGACCTCGTCATCTCCGGCGTCAACCGCGGCGCCAACATAGCGGACGACGTTACCTACTCCGGCACTGTGGC GGCGGCGTTGGAGGCGACACTGATGGGTATTCCCGCTATAGCAGTCTCCCTGGTCACCCGCTCGGCAGGAGAGCATTTCG AGGCCGCGGCCGCCTGCGCGGCAAAACTTGCCGTGACCGTGCACCAAAAAGGCCTTCCGCGCGACACTTATCTCAACGTA AACGTGCCGGATCTTCCCGCGGAAAGCCTGCTGCCGCCTCTCATCACCTGCCAGGGGAAGCGCAGCTACGAGGGGACCAT CGTCGACAAGGTCGACCCTCGCGGCAGGAACTACTACTGGATCGGCACCACCGACCTGAGCTTCGAGGACATTCCCGGCA CCGATTATCATGCCGTTTCGAGAGGACACGTATCCATTTCACCCTTGCACATCGATCTCACCAACCATGCCTCGATCGAG ATGCTGAAGTCCTGGGAATTGCCGTGA
Upstream 100 bases:
>100_bases TAAAGTGCGGCCATCCTCTGCCGAAGAGGAACCATGTGTGAGGGGCACTGGTCCTTTTAGTGACGTTTTGCAGCTGATGA CTTAGCGAGGGGTTTTACAA
Downstream 100 bases:
>100_bases TGCTGGACTTTTAGAACTCCTTTTGTTATATTTCCCCGCTGCTTGAGATCGGGGGGGAAATGAATTCTGCTGTTGCACGG AAGAGAATGGTTGCTGAGCT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKILLTNDDGVHSPGLAALIKKVSEVAEVVVVAPDREQSAVSHALTLHHPLRAARIGANVFSVEGTPTDCVNLGIHSLLS YRPDLVISGVNRGANIADDVTYSGTVAAALEATLMGIPAIAVSLVTRSAGEHFEAAAACAAKLAVTVHQKGLPRDTYLNV NVPDLPAESLLPPLITCQGKRSYEGTIVDKVDPRGRNYYWIGTTDLSFEDIPGTDYHAVSRGHVSISPLHIDLTNHASIE MLKSWELP
Sequences:
>Translated_248_residues MKILLTNDDGVHSPGLAALIKKVSEVAEVVVVAPDREQSAVSHALTLHHPLRAARIGANVFSVEGTPTDCVNLGIHSLLS YRPDLVISGVNRGANIADDVTYSGTVAAALEATLMGIPAIAVSLVTRSAGEHFEAAAACAAKLAVTVHQKGLPRDTYLNV NVPDLPAESLLPPLITCQGKRSYEGTIVDKVDPRGRNYYWIGTTDLSFEDIPGTDYHAVSRGHVSISPLHIDLTNHASIE MLKSWELP >Mature_248_residues MKILLTNDDGVHSPGLAALIKKVSEVAEVVVVAPDREQSAVSHALTLHHPLRAARIGANVFSVEGTPTDCVNLGIHSLLS YRPDLVISGVNRGANIADDVTYSGTVAAALEATLMGIPAIAVSLVTRSAGEHFEAAAACAAKLAVTVHQKGLPRDTYLNV NVPDLPAESLLPPLITCQGKRSYEGTIVDKVDPRGRNYYWIGTTDLSFEDIPGTDYHAVSRGHVSISPLHIDLTNHASIE MLKSWELP
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=246, Percent_Identity=45.1219512195122, Blast_Score=213, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_GEOBB (B5EHF5)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002139487.1 - ProteinModelPortal: B5EHF5 - SMR: B5EHF5 - GeneID: 6782683 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_2685 - HOGENOM: HBG600532 - OMA: NGFYYVN - ProtClustDB: PRK00346 - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 26423; Mature: 26423
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLTNDDGVHSPGLAALIKKVSEVAEVVVVAPDREQSAVSHALTLHHPLRAARIGANV CEEEEECCCCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCHHHHHHCCEE FSVEGTPTDCVNLGIHSLLSYRPDLVISGVNRGANIADDVTYSGTVAAALEATLMGIPAI EEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHHH AVSLVTRSAGEHFEAAAACAAKLAVTVHQKGLPRDTYLNVNVPDLPAESLLPPLITCQGK HHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCCCCHHHHCCCEEEECCC RSYEGTIVDKVDPRGRNYYWIGTTDLSFEDIPGTDYHAVSRGHVSISPLHIDLTNHASIE CCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEEEEEEEECCCCCCH MLKSWELP HHHCCCCC >Mature Secondary Structure MKILLTNDDGVHSPGLAALIKKVSEVAEVVVVAPDREQSAVSHALTLHHPLRAARIGANV CEEEEECCCCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCHHHHHHCCEE FSVEGTPTDCVNLGIHSLLSYRPDLVISGVNRGANIADDVTYSGTVAAALEATLMGIPAI EEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHHH AVSLVTRSAGEHFEAAAACAAKLAVTVHQKGLPRDTYLNVNVPDLPAESLLPPLITCQGK HHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCCCCHHHHCCCEEEECCC RSYEGTIVDKVDPRGRNYYWIGTTDLSFEDIPGTDYHAVSRGHVSISPLHIDLTNHASIE CCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEEEEEEEECCCCCCH MLKSWELP HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA