| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118952
Identifier: 197118952
GI number: 197118952
Start: 2984829
End: 2986058
Strand: Reverse
Name: 197118952
Synonym: Gbem_2575
Alternate gene names: NA
Gene position: 2986058-2984829 (Counterclockwise)
Preceding gene: 197118953
Following gene: 197118951
Centisome position: 64.7
GC content: 55.28
Gene sequence:
>1230_bases ATGAGAACCAAGCTTTCCATCGCGCTCTTGGGGCGCAGTTTCGACTGGGGGGGCGGCATGGACTTTCTACGCCACCTCGC CAACGGACTGCTTTTCAAGCAGAAAACAACCGGCATCAAGATATCCCTGCTGCTGGCTGTTGACAATAAGATCGAAACGC CGCTGGATGTTTTGCGCCTGGTGACACGAAGCGTCAGAGTCTCCGCCAAGAACAAGCGTCCGCAAATTGCGCTGCCCTCA CCGGCCTTTCACGCCAGCATGCTCGATTACTTCCGGCAGACGCAAGGCAAAGGGGTCGAGATCTGCTACTACGAGAACTC CCCCGAGGGCCTGCTTCGCTGCCTGCGGAAAATAAGGGCCGACGTTGTCCTTCCTGTAAACGGAACGCTTGGTGTCGGTT ATCCCGTATCGTGGCTGGGTTATTCTTTCGACTTCCAGCATAAATATCTTCCTGGTAACTTCAGCCCGTCAGAATGCTCT GCACGGGATCAGGAGTTTGCTGCTATTTTCAAAGATGCTGCCGCGGTCATTGTGAATTCGAAGGCGGTAAAAGAAGACAT CCTCAAGTTTTTTCCAGATACAGCTGCCGAGGTGTACAACCTGCCATTTTCTCCCAATCCTGTTTCGGAGTGGTTCGAAG ATCTTCCCTTCGACGTACAAGACAAATATTCCCTTCCGCAGAGATACTTCCTGATCAGCAACCAGTTTTGGGTGCACAAG GATCACCTGACGGCGTTCAAGGCGCTGTTGTCGGTGGATGCCCACATCGTATGTACTGGGACTGTTGTGGACTACCGCCG GCCTGAGTACATCGAGCAGGTAGGGAAGTTTTTGACGGATCATGGTCTGACCAGCCGCGTTCATATCCTTGGACACATCC CCAAGCGCGATCAGATCGAGATCATGAAGAAGTCGGTCGCCGTCGTTCAGCCTACGCTTTTTGAAGGCGGGCCTGGTGGC GGTGCGGTCTTTGACGCAGTCGGTCTTGGTGTGCCGGTGATCCTTTCCGATATACCGGTGAACCGTGAAGTGCAGGGCGA CAATCTTCGTTTTTTCGCGGCGGGCGACAGCGAGGCTTTGGCCCGGGACATGAGGGCGATCCTCAGCGCGGAGCCGCCGC GTACCGAAAGCAAGGAGTTGATTCGGATTGGCGAGGCCAACCTGGAAAGATTGGGTAACTGCCTGCTCGAAGCCGCGCAG TCCGTTGTCAGACGGAGGGCCGGGTCTTGA
Upstream 100 bases:
>100_bases TCTCCATCTGTTCCGGCGTGGTCGTCGGCGCAGGCGCCACGGTAGTCAGAGATATCACTGAGCCAGGCGTCTATGTCGGC TGTCCGGCTGTAAGGATCAA
Downstream 100 bases:
>100_bases GCGGTGGAGGCGAGCGCCAGTACAGGCAGGAAGCTTCGTCTGAGGAGTCCTGCTTTTTAAGCATTATCACGCCTGTTTAC AACGGTGCGGACTATATCGA
Product: group glycosyltransferase
Products: NA
Alternate protein names: Mannosyltransferase; Group Glycosyltransferase; Glycosyltransferase; Group 1 Glycosyl Transferase; A-Glycosyltransferase; Alpha-Glycosyltransferase Protein; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family Protein; Mannosyltransferase B
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRTKLSIALLGRSFDWGGGMDFLRHLANGLLFKQKTTGIKISLLLAVDNKIETPLDVLRLVTRSVRVSAKNKRPQIALPS PAFHASMLDYFRQTQGKGVEICYYENSPEGLLRCLRKIRADVVLPVNGTLGVGYPVSWLGYSFDFQHKYLPGNFSPSECS ARDQEFAAIFKDAAAVIVNSKAVKEDILKFFPDTAAEVYNLPFSPNPVSEWFEDLPFDVQDKYSLPQRYFLISNQFWVHK DHLTAFKALLSVDAHIVCTGTVVDYRRPEYIEQVGKFLTDHGLTSRVHILGHIPKRDQIEIMKKSVAVVQPTLFEGGPGG GAVFDAVGLGVPVILSDIPVNREVQGDNLRFFAAGDSEALARDMRAILSAEPPRTESKELIRIGEANLERLGNCLLEAAQ SVVRRRAGS
Sequences:
>Translated_409_residues MRTKLSIALLGRSFDWGGGMDFLRHLANGLLFKQKTTGIKISLLLAVDNKIETPLDVLRLVTRSVRVSAKNKRPQIALPS PAFHASMLDYFRQTQGKGVEICYYENSPEGLLRCLRKIRADVVLPVNGTLGVGYPVSWLGYSFDFQHKYLPGNFSPSECS ARDQEFAAIFKDAAAVIVNSKAVKEDILKFFPDTAAEVYNLPFSPNPVSEWFEDLPFDVQDKYSLPQRYFLISNQFWVHK DHLTAFKALLSVDAHIVCTGTVVDYRRPEYIEQVGKFLTDHGLTSRVHILGHIPKRDQIEIMKKSVAVVQPTLFEGGPGG GAVFDAVGLGVPVILSDIPVNREVQGDNLRFFAAGDSEALARDMRAILSAEPPRTESKELIRIGEANLERLGNCLLEAAQ SVVRRRAGS >Mature_409_residues MRTKLSIALLGRSFDWGGGMDFLRHLANGLLFKQKTTGIKISLLLAVDNKIETPLDVLRLVTRSVRVSAKNKRPQIALPS PAFHASMLDYFRQTQGKGVEICYYENSPEGLLRCLRKIRADVVLPVNGTLGVGYPVSWLGYSFDFQHKYLPGNFSPSECS ARDQEFAAIFKDAAAVIVNSKAVKEDILKFFPDTAAEVYNLPFSPNPVSEWFEDLPFDVQDKYSLPQRYFLISNQFWVHK DHLTAFKALLSVDAHIVCTGTVVDYRRPEYIEQVGKFLTDHGLTSRVHILGHIPKRDQIEIMKKSVAVVQPTLFEGGPGG GAVFDAVGLGVPVILSDIPVNREVQGDNLRFFAAGDSEALARDMRAILSAEPPRTESKELIRIGEANLERLGNCLLEAAQ SVVRRRAGS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45477; Mature: 45477
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS00264 NEUROHYPOPHYS_HORM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKLSIALLGRSFDWGGGMDFLRHLANGLLFKQKTTGIKISLLLAVDNKIETPLDVLRL CCCEEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCCCHHHHHHH VTRSVRVSAKNKRPQIALPSPAFHASMLDYFRQTQGKGVEICYYENSPEGLLRCLRKIRA HHHHHHEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCC DVVLPVNGTLGVGYPVSWLGYSFDFQHKYLPGNFSPSECSARDQEFAAIFKDAAAVIVNS CEEEECCCCCCCCCCHHHHCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECC KAVKEDILKFFPDTAAEVYNLPFSPNPVSEWFEDLPFDVQDKYSLPQRYFLISNQFWVHK HHHHHHHHHHCCCCHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEH DHLTAFKALLSVDAHIVCTGTVVDYRRPEYIEQVGKFLTDHGLTSRVHILGHIPKRDQIE HHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH IMKKSVAVVQPTLFEGGPGGGAVFDAVGLGVPVILSDIPVNREVQGDNLRFFAAGDSEAL HHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHEEECCCCCCCCCCCCEEEEECCCHHHH ARDMRAILSAEPPRTESKELIRIGEANLERLGNCLLEAAQSVVRRRAGS HHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRTKLSIALLGRSFDWGGGMDFLRHLANGLLFKQKTTGIKISLLLAVDNKIETPLDVLRL CCCEEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCCCHHHHHHH VTRSVRVSAKNKRPQIALPSPAFHASMLDYFRQTQGKGVEICYYENSPEGLLRCLRKIRA HHHHHHEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCC DVVLPVNGTLGVGYPVSWLGYSFDFQHKYLPGNFSPSECSARDQEFAAIFKDAAAVIVNS CEEEECCCCCCCCCCHHHHCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECC KAVKEDILKFFPDTAAEVYNLPFSPNPVSEWFEDLPFDVQDKYSLPQRYFLISNQFWVHK HHHHHHHHHHCCCCHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEH DHLTAFKALLSVDAHIVCTGTVVDYRRPEYIEQVGKFLTDHGLTSRVHILGHIPKRDQIE HHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH IMKKSVAVVQPTLFEGGPGGGAVFDAVGLGVPVILSDIPVNREVQGDNLRFFAAGDSEAL HHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHEEECCCCCCCCCCCCEEEEECCCHHHH ARDMRAILSAEPPRTESKELIRIGEANLERLGNCLLEAAQSVVRRRAGS HHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA