Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197118902

Identifier: 197118902

GI number: 197118902

Start: 2927236

End: 2927553

Strand: Direct

Name: 197118902

Synonym: Gbem_2525

Alternate gene names: NA

Gene position: 2927236-2927553 (Clockwise)

Preceding gene: 197118901

Following gene: 197118903

Centisome position: 63.43

GC content: 47.8

Gene sequence:

>318_bases
ATGTATGGGTACCAGTTGACATTTTTTACCCAGCAGGATCGAACACATAAGAATCGGTGTCTGGGGGAATGGCTCATCGA
GGAGGCGCTTTGCATGGGCATCAAAGGCGCAACGATGTTCACTGCAGCAGAAGGTTTTGGTCGAGAGCGAAAGCTACACT
TCGTAGGATATTTTGATGTCTCCGATCAACCGATAGAGGTCTCCATGGCGGTCAGCGAGGAGGCGGCCAGCATATTTTTA
GAACATTTGAAACAGGAAGGAATCGATGTCTTTTATATCAAGTCGCCTATCGAATTCGGCACAACAGGGAATCGGTAA

Upstream 100 bases:

>100_bases
GTCGGTCGTTTTCTAGTTTCACGAGACAGGGGTATTACCAATTACGCCCCCAATACCGGATCTCGCTACCATTCATAAAG
CAATATGGGAGGGAAAGACA

Downstream 100 bases:

>100_bases
GCGATCCGACGGCTTTACAAGCTTCGTTTAACACTTGTCTGGGGTAGATCATGCGGTTTGGAAATGAAAACGACTTTGAC
ATGACTGGAGAGTTCGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MYGYQLTFFTQQDRTHKNRCLGEWLIEEALCMGIKGATMFTAAEGFGRERKLHFVGYFDVSDQPIEVSMAVSEEAASIFL
EHLKQEGIDVFYIKSPIEFGTTGNR

Sequences:

>Translated_105_residues
MYGYQLTFFTQQDRTHKNRCLGEWLIEEALCMGIKGATMFTAAEGFGRERKLHFVGYFDVSDQPIEVSMAVSEEAASIFL
EHLKQEGIDVFYIKSPIEFGTTGNR
>Mature_105_residues
MYGYQLTFFTQQDRTHKNRCLGEWLIEEALCMGIKGATMFTAAEGFGRERKLHFVGYFDVSDQPIEVSMAVSEEAASIFL
EHLKQEGIDVFYIKSPIEFGTTGNR

Specific function: Unknown

COG id: COG1993

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11981; Mature: 11981

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGYQLTFFTQQDRTHKNRCLGEWLIEEALCMGIKGATMFTAAEGFGRERKLHFVGYFDV
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECC
SDQPIEVSMAVSEEAASIFLEHLKQEGIDVFYIKSPIEFGTTGNR
CCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MYGYQLTFFTQQDRTHKNRCLGEWLIEEALCMGIKGATMFTAAEGFGRERKLHFVGYFDV
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECC
SDQPIEVSMAVSEEAASIFLEHLKQEGIDVFYIKSPIEFGTTGNR
CCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA