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The map label for this gene is ycaC [H]

Identifier: 197118901

GI number: 197118901

Start: 2926059

End: 2926664

Strand: Direct

Name: ycaC [H]

Synonym: Gbem_2524

Alternate gene names: 197118901

Gene position: 2926059-2926664 (Clockwise)

Preceding gene: 197118900

Following gene: 197118902

Centisome position: 63.4

GC content: 54.95

Gene sequence:

>606_bases
ATGAAAACCGAAAAATTCACAGCGACAAACGCAGCCATGCTTCTCATCGATCATCAAGTCGGAACCCTAAGTTGGTGCTG
CAACATCCCTCAAGAATTGATCAAAAATAACACACGTGCGCTGGCTCGCGCAGCGAAGGCGCTGGATATGCCTCTGATTC
TCACAAGCAGCATGGAAGAATACACACAGGGGCCCCTACTCAAGGATTTGGAAGAGATCGCACCGGAAGAGTACGCTCGC
CGGGTGAAGCGGTTCGGGGTAGTGAACGCTTGGGATGATCCCAACTACAAGGCGGCTGTCATGGCAACCGGACGGCGGAA
TCTCATCATCGCGGGTCTCACTAACGATGTTTGCATCGTTTACCCGGCGATAAGCGCAGTAGAGGAAGGCTTCAGCGTGC
AGGTAGTAGTCGATGCCGGCGGTTCTCCGACCCAGATCGCAGATGAAACCGCCTTGAGGCGCATGGAGCGTGCGGGGGTG
ACTCTCACGTCGACCAATCAGCTCATCGCCGAGCTGGCGGGCTCGTGGACAAACGAAGGCGGCTCCAAACTGATCCAGAT
ATTGTTCGAAGAAGTGTTGGTACACCTCGGCAAACCGTCTGCCTAA

Upstream 100 bases:

>100_bases
CTGCAAGGCAGTTTGACCGTAAACTAGAAAACGTTAGTCCCCATCCAGAAAAAGGCCTTGTCAAATCAGCTCCCTAAATC
CGATACAGAAGGAGACAGTC

Downstream 100 bases:

>100_bases
ACGGCCTCTGTACAATCTAGCATGGCATTTTGCCCCTCAGGAGCCATCCTGTGGGGCAAAATGCCATCAGAGGTATCAGT
CGGAGCCGGCTGAGGCGATC

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKTEKFTATNAAMLLIDHQVGTLSWCCNIPQELIKNNTRALARAAKALDMPLILTSSMEEYTQGPLLKDLEEIAPEEYAR
RVKRFGVVNAWDDPNYKAAVMATGRRNLIIAGLTNDVCIVYPAISAVEEGFSVQVVVDAGGSPTQIADETALRRMERAGV
TLTSTNQLIAELAGSWTNEGGSKLIQILFEEVLVHLGKPSA

Sequences:

>Translated_201_residues
MKTEKFTATNAAMLLIDHQVGTLSWCCNIPQELIKNNTRALARAAKALDMPLILTSSMEEYTQGPLLKDLEEIAPEEYAR
RVKRFGVVNAWDDPNYKAAVMATGRRNLIIAGLTNDVCIVYPAISAVEEGFSVQVVVDAGGSPTQIADETALRRMERAGV
TLTSTNQLIAELAGSWTNEGGSKLIQILFEEVLVHLGKPSA
>Mature_201_residues
MKTEKFTATNAAMLLIDHQVGTLSWCCNIPQELIKNNTRALARAAKALDMPLILTSSMEEYTQGPLLKDLEEIAPEEYAR
RVKRFGVVNAWDDPNYKAAVMATGRRNLIIAGLTNDVCIVYPAISAVEEGFSVQVVVDAGGSPTQIADETALRRMERAGV
TLTSTNQLIAELAGSWTNEGGSKLIQILFEEVLVHLGKPSA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=175, Percent_Identity=40.5714285714286, Blast_Score=136, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 21875; Mature: 21875

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTEKFTATNAAMLLIDHQVGTLSWCCNIPQELIKNNTRALARAAKALDMPLILTSSMEE
CCCCCEECCCEEEEEEECCCCHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCEECCCHHH
YTQGPLLKDLEEIAPEEYARRVKRFGVVNAWDDPNYKAAVMATGRRNLIIAGLTNDVCIV
HHCCCHHHHHHHHCHHHHHHHHHHCCCEECCCCCCCEEEEEECCCCCEEEEECCCCEEEE
YPAISAVEEGFSVQVVVDAGGSPTQIADETALRRMERAGVTLTSTNQLIAELAGSWTNEG
EECHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHCCCCCCH
GSKLIQILFEEVLVHLGKPSA
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTEKFTATNAAMLLIDHQVGTLSWCCNIPQELIKNNTRALARAAKALDMPLILTSSMEE
CCCCCEECCCEEEEEEECCCCHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCEECCCHHH
YTQGPLLKDLEEIAPEEYARRVKRFGVVNAWDDPNYKAAVMATGRRNLIIAGLTNDVCIV
HHCCCHHHHHHHHCHHHHHHHHHHCCCEECCCCCCCEEEEEECCCCCEEEEECCCCEEEE
YPAISAVEEGFSVQVVVDAGGSPTQIADETALRRMERAGVTLTSTNQLIAELAGSWTNEG
EECHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHCCCCCCH
GSKLIQILFEEVLVHLGKPSA
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]