| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197118686
Identifier: 197118686
GI number: 197118686
Start: 2678608
End: 2678988
Strand: Reverse
Name: 197118686
Synonym: Gbem_2305
Alternate gene names: NA
Gene position: 2678988-2678608 (Counterclockwise)
Preceding gene: 197118687
Following gene: 197118684
Centisome position: 58.05
GC content: 58.27
Gene sequence:
>381_bases ATGGAAAAAGAGAAACTGCAGGAGTCGGGAAGCGAGATGGCTGAAGCCCCGGTTGACGTCGTTGAAGCCGAGATCGACCC GGCGGTCATCAGTGCCGGGCTTTCGAAGGTTCGCCGGCGTCGTTGGGTGGTGTGGAGCGTGATGATCGTTTACCTTCCCA CCATGTGGACCACGCAGAAAATCACTCACTCATTCAGCGGGTCTATGCCCGTGTTCTTCATCTGGTTCCTGCTACTTCTG GCCGCCATGGGATACTCGGCGGTGGCCCGGTGCCCGCGCTGCGGCAACTACTACCATGTGCACGGGATGATCTTGCTCTA TCTGCGCAGGTGCCTGCACTGCCAGCTTCCCCTCAACGACGACCAAAAACCGCGATTCTAA
Upstream 100 bases:
>100_bases GATGCTGCGGAATTTTCTGAAGGGGCTTACGGTCAAATATCGGGAGACCCCGGCGAAGTAAGGGACTCGCGTTTGGAGTT TGGTTGTGGACGATCAGTCG
Downstream 100 bases:
>100_bases CGCGTCTCCCCCCCATCCGGCAGAGGTGTCGCCGCTGCTTTTTCTGCATCCTGCACCAAAGCTTGCGCTTGCTCCAGCGC CTCGGTCAGACTCTCCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MEKEKLQESGSEMAEAPVDVVEAEIDPAVISAGLSKVRRRRWVVWSVMIVYLPTMWTTQKITHSFSGSMPVFFIWFLLLL AAMGYSAVARCPRCGNYYHVHGMILLYLRRCLHCQLPLNDDQKPRF
Sequences:
>Translated_126_residues MEKEKLQESGSEMAEAPVDVVEAEIDPAVISAGLSKVRRRRWVVWSVMIVYLPTMWTTQKITHSFSGSMPVFFIWFLLLL AAMGYSAVARCPRCGNYYHVHGMILLYLRRCLHCQLPLNDDQKPRF >Mature_126_residues MEKEKLQESGSEMAEAPVDVVEAEIDPAVISAGLSKVRRRRWVVWSVMIVYLPTMWTTQKITHSFSGSMPVFFIWFLLLL AAMGYSAVARCPRCGNYYHVHGMILLYLRRCLHCQLPLNDDQKPRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14535; Mature: 14535
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKEKLQESGSEMAEAPVDVVEAEIDPAVISAGLSKVRRRRWVVWSVMIVYLPTMWTTQK CCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ITHSFSGSMPVFFIWFLLLLAAMGYSAVARCPRCGNYYHVHGMILLYLRRCLHCQLPLND HHHHCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCC DQKPRF CCCCCC >Mature Secondary Structure MEKEKLQESGSEMAEAPVDVVEAEIDPAVISAGLSKVRRRRWVVWSVMIVYLPTMWTTQK CCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ITHSFSGSMPVFFIWFLLLLAAMGYSAVARCPRCGNYYHVHGMILLYLRRCLHCQLPLND HHHHCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCC DQKPRF CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA