| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yehS [H]
Identifier: 197118687
GI number: 197118687
Start: 2679028
End: 2679504
Strand: Reverse
Name: yehS [H]
Synonym: Gbem_2306
Alternate gene names: 197118687
Gene position: 2679504-2679028 (Counterclockwise)
Preceding gene: 197118688
Following gene: 197118686
Centisome position: 58.06
GC content: 51.78
Gene sequence:
>477_bases ATGACCAACAATGACGTATTCCGCAGATTGCGCTATGCCATGAATATGAATACACAGGCAGTGGTGGAGACTTTCAGACT GTCCGGCATGAAGATGGGGCAGGCCGATATCACCTCGCTGGTCAAGAAAGAGGACGAAGAGGGATACAAAGAGTGCAGCG ACGAGGTTCTGGAAGCATTCCTGGACGGCTTCATAGCCCTTAAGAGGGGGAAGAGAGAGGGAGAACCGGAAACACGGAAG GATGAGGTCCTGTTGACCAACAACGACATCCTGAAAAAGATCCGAATTGCTTTAGCCCTTAAGGAAGATGAGATGCTGAT GCTGTTCAAGCTGGCGCATTTCCCCGTTTCGAAATCGGAGCTATCGGCCGTTTTTCGCGCCAAAGGGCAGGAGAACTACA AGCCGTGCGGCGATCAGATGCTGCGGAATTTTCTGAAGGGGCTTACGGTCAAATATCGGGAGACCCCGGCGAAGTAA
Upstream 100 bases:
>100_bases CCTGCCAACGTGTCACTCTGTCATATCAAAAGCTTGCCCGCTTCAGCATTAAATGCTATGTAGTATCAGGCGCTAGCCTA TGCCTTCAGGGAGCTATTAG
Downstream 100 bases:
>100_bases GGGACTCGCGTTTGGAGTTTGGTTGTGGACGATCAGTCGATGGAAAAAGAGAAACTGCAGGAGTCGGGAAGCGAGATGGC TGAAGCCCCGGTTGACGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTNNDVFRRLRYAMNMNTQAVVETFRLSGMKMGQADITSLVKKEDEEGYKECSDEVLEAFLDGFIALKRGKREGEPETRK DEVLLTNNDILKKIRIALALKEDEMLMLFKLAHFPVSKSELSAVFRAKGQENYKPCGDQMLRNFLKGLTVKYRETPAK
Sequences:
>Translated_158_residues MTNNDVFRRLRYAMNMNTQAVVETFRLSGMKMGQADITSLVKKEDEEGYKECSDEVLEAFLDGFIALKRGKREGEPETRK DEVLLTNNDILKKIRIALALKEDEMLMLFKLAHFPVSKSELSAVFRAKGQENYKPCGDQMLRNFLKGLTVKYRETPAK >Mature_157_residues TNNDVFRRLRYAMNMNTQAVVETFRLSGMKMGQADITSLVKKEDEEGYKECSDEVLEAFLDGFIALKRGKREGEPETRKD EVLLTNNDILKKIRIALALKEDEMLMLFKLAHFPVSKSELSAVFRAKGQENYKPCGDQMLRNFLKGLTVKYRETPAK
Specific function: Unknown
COG id: COG4807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788443, Length=151, Percent_Identity=40.3973509933775, Blast_Score=121, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009921 [H]
Pfam domain/function: PF07308 DUF1456 [H]
EC number: NA
Molecular weight: Translated: 18175; Mature: 18044
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNDVFRRLRYAMNMNTQAVVETFRLSGMKMGQADITSLVKKEDEEGYKECSDEVLEAF CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH LDGFIALKRGKREGEPETRKDEVLLTNNDILKKIRIALALKEDEMLMLFKLAHFPVSKSE HHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHH LSAVFRAKGQENYKPCGDQMLRNFLKGLTVKYRETPAK HHHHHHHCCCCCCCCCHHHHHHHHHHHCEEECCCCCCC >Mature Secondary Structure TNNDVFRRLRYAMNMNTQAVVETFRLSGMKMGQADITSLVKKEDEEGYKECSDEVLEAF CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH LDGFIALKRGKREGEPETRKDEVLLTNNDILKKIRIALALKEDEMLMLFKLAHFPVSKSE HHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHH LSAVFRAKGQENYKPCGDQMLRNFLKGLTVKYRETPAK HHHHHHHCCCCCCCCCHHHHHHHHHHHCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]