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The map label for this gene is fdnI-1 [C]

Identifier: 197118646

GI number: 197118646

Start: 2633708

End: 2634919

Strand: Reverse

Name: fdnI-1 [C]

Synonym: Gbem_2265

Alternate gene names: 197118646

Gene position: 2634919-2633708 (Counterclockwise)

Preceding gene: 197118647

Following gene: 197118645

Centisome position: 57.09

GC content: 61.96

Gene sequence:

>1212_bases
ATGACCGCTGCAAAGATAATCATCAACGAGATCAAGGGATACCACCGCTTCGTGAAATTCCTGATCGTCCTGGTATCGCT
GGGCGCGCTAGCCTCCCTGGTCCGCTTCGTGTTCGGCCTCGGGGTCACCACCAACCTGAACGACACCTTCCCCTGGGGGC
TTTGGATCTCCTTCGACGTCGTCACCGCCGTACCACTGGCGGCGGGCGCCTTCACCCTCGGGGCCATCGTGCACTGCTTC
CACATCAAGAAGCTTGAGCCGCTGGTGCGTCCGGCCATCGTGACCGGCTTCCTCGGCTACTCCCTTGTCTGCGTGGGGCT
TCTGCTCGACCTGGGGCAGCCGCAGCGCTGCTGGCACACCATGGTGTACTGGAACCCGCACTCCCCGATGTTCGAGGTTT
CCATGTGCATCGCCGCGTACACCACGGTGCTCTTCCTCGAGTTCCTGTCGCCGGTCTGCGAGAAGTTCGGCTACCACGTG
CCGTTGAGGCTGCTCCGGACCATCGAGATGCCGCTCGTCATCGCGGCGGCCTCCATCTCGACCTTGCACCAGTCTTCGCT
CGGGACCTTCTTCCTGATCGCGGTCGATAAGCTGCACAGCCTCTGGTACAACCCGCTCCTGCCGCTGCTCTTCTGGGTTT
CGGCCATGTGCGCCGGCATCTCCATCATCATCGTGGAAGCGACCATGAGCCACAAATGGATGGGGCAGCCCGACGAGAGC
GAGCTTTTGGAGACTCTGGCGAAGATCCTCCCCTGGGTCATCACCGCGTACCTGACCCTGAAGCTCTTCTCCCTCTTCGC
GCTGACCGAGGGGCCGCTCTTCAACCGTCCGGGGCTGGTGGCGCTTTTCGCTGTCGAGATGCTGGGCGGGGTGATCGCGC
CCCTGGTGATGCTGATGAACGGCAACGTGCGCGAGAACAACCGCCTGCGCGCTACCGCCGCCTGGCTCGTCATCGCAGGC
GTCATCTTGAACCGCTTCAACGTATCGATGTTCGGGATGGAGGCTCCGGGAACCTTCTACTACCCCTCCTTCATCGAGAG
CCTGGTGACCGTCGGCATCATCGCGGCGCACATCCTGTTCTTCGTTCTGATCGCGAAGTACTTCCCGATCTTCGAGCACC
ATCCGGAGACCGTTGACTACTCGATCCCGGACAACTTCCACAAGACCGACAAGGGTCCTGCAGTACACGGCAAGGTCGCC
GGCGAAGCCTAG

Upstream 100 bases:

>100_bases
TTCGCTCTCGCTCCTTTCCTGGTTCAACCACAGGAAAGAAAGGATCGCCAAGGAAGAGGAACAGAGAAAATCCGGCGCAA
CGCCTAAGGAGGAGAGCTAG

Downstream 100 bases:

>100_bases
CCGCAAGCTGGCTTGAGACGAACCGCAAGTGAAGCAAGTGAACGGAAGTAATTGAAGTAAGTTAAGTGAAGAAGTACGAG
GACACCCTCCGAAAGCCCCT

Product: formate dehydrogenase b-type cytochrome subunit

Products: NA

Alternate protein names: HMC operon ORF 3 [H]

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MTAAKIIINEIKGYHRFVKFLIVLVSLGALASLVRFVFGLGVTTNLNDTFPWGLWISFDVVTAVPLAAGAFTLGAIVHCF
HIKKLEPLVRPAIVTGFLGYSLVCVGLLLDLGQPQRCWHTMVYWNPHSPMFEVSMCIAAYTTVLFLEFLSPVCEKFGYHV
PLRLLRTIEMPLVIAAASISTLHQSSLGTFFLIAVDKLHSLWYNPLLPLLFWVSAMCAGISIIIVEATMSHKWMGQPDES
ELLETLAKILPWVITAYLTLKLFSLFALTEGPLFNRPGLVALFAVEMLGGVIAPLVMLMNGNVRENNRLRATAAWLVIAG
VILNRFNVSMFGMEAPGTFYYPSFIESLVTVGIIAAHILFFVLIAKYFPIFEHHPETVDYSIPDNFHKTDKGPAVHGKVA
GEA

Sequences:

>Translated_403_residues
MTAAKIIINEIKGYHRFVKFLIVLVSLGALASLVRFVFGLGVTTNLNDTFPWGLWISFDVVTAVPLAAGAFTLGAIVHCF
HIKKLEPLVRPAIVTGFLGYSLVCVGLLLDLGQPQRCWHTMVYWNPHSPMFEVSMCIAAYTTVLFLEFLSPVCEKFGYHV
PLRLLRTIEMPLVIAAASISTLHQSSLGTFFLIAVDKLHSLWYNPLLPLLFWVSAMCAGISIIIVEATMSHKWMGQPDES
ELLETLAKILPWVITAYLTLKLFSLFALTEGPLFNRPGLVALFAVEMLGGVIAPLVMLMNGNVRENNRLRATAAWLVIAG
VILNRFNVSMFGMEAPGTFYYPSFIESLVTVGIIAAHILFFVLIAKYFPIFEHHPETVDYSIPDNFHKTDKGPAVHGKVA
GEA
>Mature_402_residues
TAAKIIINEIKGYHRFVKFLIVLVSLGALASLVRFVFGLGVTTNLNDTFPWGLWISFDVVTAVPLAAGAFTLGAIVHCFH
IKKLEPLVRPAIVTGFLGYSLVCVGLLLDLGQPQRCWHTMVYWNPHSPMFEVSMCIAAYTTVLFLEFLSPVCEKFGYHVP
LRLLRTIEMPLVIAAASISTLHQSSLGTFFLIAVDKLHSLWYNPLLPLLFWVSAMCAGISIIIVEATMSHKWMGQPDESE
LLETLAKILPWVITAYLTLKLFSLFALTEGPLFNRPGLVALFAVEMLGGVIAPLVMLMNGNVRENNRLRATAAWLVIAGV
ILNRFNVSMFGMEAPGTFYYPSFIESLVTVGIIAAHILFFVLIAKYFPIFEHHPETVDYSIPDNFHKTDKGPAVHGKVAG
EA

Specific function: HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates [H]

COG id: COG5557

COG function: function code C; Polysulphide reductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrfD family [H]

Homologues:

Organism=Escherichia coli, GI2367183, Length=346, Percent_Identity=29.7687861271676, Blast_Score=157, Evalue=9e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005614 [H]

Pfam domain/function: PF03916 NrfD [H]

EC number: NA

Molecular weight: Translated: 44628; Mature: 44496

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure 
TAAKIIINEIKGYHRFVKFLIVLVSLGALASLVRFVFGLGVTTNLNDTFPWGLWISFDV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHH
VTAVPLAAGAFTLGAIVHCFHIKKLEPLVRPAIVTGFLGYSLVCVGLLLDLGQPQRCWHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEE
MVYWNPHSPMFEVSMCIAAYTTVLFLEFLSPVCEKFGYHVPLRLLRTIEMPLVIAAASIS
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TLHQSSLGTFFLIAVDKLHSLWYNPLLPLLFWVSAMCAGISIIIVEATMSHKWMGQPDES
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHCCCCCCCCCHH
ELLETLAKILPWVITAYLTLKLFSLFALTEGPLFNRPGLVALFAVEMLGGVIAPLVMLMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GNVRENNRLRATAAWLVIAGVILNRFNVSMFGMEAPGTFYYPSFIESLVTVGIIAAHILF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEECHHHHHHHHHHHHHHHHHHH
FVLIAKYFPIFEHHPETVDYSIPDNFHKTDKGPAVHGKVAGEA
HHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]