| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yeeZ [C]
Identifier: 197118349
GI number: 197118349
Start: 2270463
End: 2271308
Strand: Direct
Name: yeeZ [C]
Synonym: Gbem_1966
Alternate gene names: 197118349
Gene position: 2270463-2271308 (Clockwise)
Preceding gene: 197118344
Following gene: 197118350
Centisome position: 49.2
GC content: 64.54
Gene sequence:
>846_bases ATGGAACAACTGCTGATAGTCGGTTGCGGCGCCATTGGGCGACGGGTCGCAGCGCTGGCGCTTGCGCGGGGGATGAAGGT CTCCAGCTTCAGAAGGAACGAAGAAGAGGTTGCAGGCGCGACCACATACACCGGAAACCTGGACCAGCCGGCGACGCTTG CGGGACTGCCGGTCAAAGGTGCTGGGGTTATCTACCTCGCGCCCCCTCCGGGTGGAGGCAACGAGGATACTAGGATGCGC AACTTCTTGGCCTCCATCGCCCCCGGGCAAGAGCCCGAAAAAATGGTCTACATATCGACCAGCGCGGTCTACGGGGACTG CGGCACCGCGACGGTCACCGAGGAGAGTGAGGCCAACCCGCAGACCAGCAGGGGAAAGCGCCGGCTGCACGCCGAGCGCC TGCTAAGCGACTGGGGGAGGGAGCGCCACGTTCCCGTTGTGATCCTCAGGGTAACTGCCATTTATGCTGCGGACCGCCTC CCCGTCACCCAGCTCACCACCGGGCAGCCGGTGCTGCGCGAGGAGGAATCGCTTCCCAGCAATAGAATCCATGCCGACGA CCTGTCGCGGATCTGCCTCGCCGCCCTGGAGCGGGGGAAAGACGGGGCAATCTTCAACGTGAGCGACGGCCAGTCCACCA CCATGACCAGCTATTTCAACGCCGCCGCCGATCGGCTCGGGCTCCCGAGGCCGCGCCAGGTGGCCATGGAGGAGGCGCGC CGGGTGATGAGCCCGCTCATGATCTCCTACTTCTCCGAGGGGAGGGTGGTGTCGAACCGCAAAATGATTGAGGAGCTGGG GATAGAGCTCCTCTACCCTGACCTCGAGTCGGGGCTCAAGGGGTAG
Upstream 100 bases:
>100_bases GCACCCGGATTCCCTTTCGGAAAGGGCAATCGAGGTGGCGCAGCATTCTCTCCGCTTCGAAAAAGATCATCGATAATCAG TATAGGGAAAGGGGCAACAC
Downstream 100 bases:
>100_bases CTTTGCCTGCAGGTCGCACGGCTTGACTTTCGCGGTCGCCGAATTAAGGTTTTCCGATCTTTAAACCAACCTTAATAGGA GGACATCGAAATGCTCGAAA
Product: NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD-Dependent Epimerase/Dehydratase Family Protein; Epimerase; Actc Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; NAD-Dependent Epimerase
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MEQLLIVGCGAIGRRVAALALARGMKVSSFRRNEEEVAGATTYTGNLDQPATLAGLPVKGAGVIYLAPPPGGGNEDTRMR NFLASIAPGQEPEKMVYISTSAVYGDCGTATVTEESEANPQTSRGKRRLHAERLLSDWGRERHVPVVILRVTAIYAADRL PVTQLTTGQPVLREEESLPSNRIHADDLSRICLAALERGKDGAIFNVSDGQSTTMTSYFNAAADRLGLPRPRQVAMEEAR RVMSPLMISYFSEGRVVSNRKMIEELGIELLYPDLESGLKG
Sequences:
>Translated_281_residues MEQLLIVGCGAIGRRVAALALARGMKVSSFRRNEEEVAGATTYTGNLDQPATLAGLPVKGAGVIYLAPPPGGGNEDTRMR NFLASIAPGQEPEKMVYISTSAVYGDCGTATVTEESEANPQTSRGKRRLHAERLLSDWGRERHVPVVILRVTAIYAADRL PVTQLTTGQPVLREEESLPSNRIHADDLSRICLAALERGKDGAIFNVSDGQSTTMTSYFNAAADRLGLPRPRQVAMEEAR RVMSPLMISYFSEGRVVSNRKMIEELGIELLYPDLESGLKG >Mature_281_residues MEQLLIVGCGAIGRRVAALALARGMKVSSFRRNEEEVAGATTYTGNLDQPATLAGLPVKGAGVIYLAPPPGGGNEDTRMR NFLASIAPGQEPEKMVYISTSAVYGDCGTATVTEESEANPQTSRGKRRLHAERLLSDWGRERHVPVVILRVTAIYAADRL PVTQLTTGQPVLREEESLPSNRIHADDLSRICLAALERGKDGAIFNVSDGQSTTMTSYFNAAADRLGLPRPRQVAMEEAR RVMSPLMISYFSEGRVVSNRKMIEELGIELLYPDLESGLKG
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30487; Mature: 30487
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLLIVGCGAIGRRVAALALARGMKVSSFRRNEEEVAGATTYTGNLDQPATLAGLPVKG CCCEEEECCCHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCEEECCCCCCCCEEECCCCCC AGVIYLAPPPGGGNEDTRMRNFLASIAPGQEPEKMVYISTSAVYGDCGTATVTEESEANP CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECEEECCCCCCEECCCCCCCC QTSRGKRRLHAERLLSDWGRERHVPVVILRVTAIYAADRLPVTQLTTGQPVLREEESLPS CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCEEECCCCCHHHHHHCCCC NRIHADDLSRICLAALERGKDGAIFNVSDGQSTTMTSYFNAAADRLGLPRPRQVAMEEAR CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH RVMSPLMISYFSEGRVVSNRKMIEELGIELLYPDLESGLKG HHHHHHHHHHHCCCCEEHHHHHHHHCCCEEECCCHHCCCCC >Mature Secondary Structure MEQLLIVGCGAIGRRVAALALARGMKVSSFRRNEEEVAGATTYTGNLDQPATLAGLPVKG CCCEEEECCCHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCEEECCCCCCCCEEECCCCCC AGVIYLAPPPGGGNEDTRMRNFLASIAPGQEPEKMVYISTSAVYGDCGTATVTEESEANP CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECEEECCCCCCEECCCCCCCC QTSRGKRRLHAERLLSDWGRERHVPVVILRVTAIYAADRLPVTQLTTGQPVLREEESLPS CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCEEECCCCCHHHHHHCCCC NRIHADDLSRICLAALERGKDGAIFNVSDGQSTTMTSYFNAAADRLGLPRPRQVAMEEAR CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH RVMSPLMISYFSEGRVVSNRKMIEELGIELLYPDLESGLKG HHHHHHHHHHHCCCCEEHHHHHHHHCCCEEECCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA