Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is yeeZ [C]

Identifier: 197118349

GI number: 197118349

Start: 2270463

End: 2271308

Strand: Direct

Name: yeeZ [C]

Synonym: Gbem_1966

Alternate gene names: 197118349

Gene position: 2270463-2271308 (Clockwise)

Preceding gene: 197118344

Following gene: 197118350

Centisome position: 49.2

GC content: 64.54

Gene sequence:

>846_bases
ATGGAACAACTGCTGATAGTCGGTTGCGGCGCCATTGGGCGACGGGTCGCAGCGCTGGCGCTTGCGCGGGGGATGAAGGT
CTCCAGCTTCAGAAGGAACGAAGAAGAGGTTGCAGGCGCGACCACATACACCGGAAACCTGGACCAGCCGGCGACGCTTG
CGGGACTGCCGGTCAAAGGTGCTGGGGTTATCTACCTCGCGCCCCCTCCGGGTGGAGGCAACGAGGATACTAGGATGCGC
AACTTCTTGGCCTCCATCGCCCCCGGGCAAGAGCCCGAAAAAATGGTCTACATATCGACCAGCGCGGTCTACGGGGACTG
CGGCACCGCGACGGTCACCGAGGAGAGTGAGGCCAACCCGCAGACCAGCAGGGGAAAGCGCCGGCTGCACGCCGAGCGCC
TGCTAAGCGACTGGGGGAGGGAGCGCCACGTTCCCGTTGTGATCCTCAGGGTAACTGCCATTTATGCTGCGGACCGCCTC
CCCGTCACCCAGCTCACCACCGGGCAGCCGGTGCTGCGCGAGGAGGAATCGCTTCCCAGCAATAGAATCCATGCCGACGA
CCTGTCGCGGATCTGCCTCGCCGCCCTGGAGCGGGGGAAAGACGGGGCAATCTTCAACGTGAGCGACGGCCAGTCCACCA
CCATGACCAGCTATTTCAACGCCGCCGCCGATCGGCTCGGGCTCCCGAGGCCGCGCCAGGTGGCCATGGAGGAGGCGCGC
CGGGTGATGAGCCCGCTCATGATCTCCTACTTCTCCGAGGGGAGGGTGGTGTCGAACCGCAAAATGATTGAGGAGCTGGG
GATAGAGCTCCTCTACCCTGACCTCGAGTCGGGGCTCAAGGGGTAG

Upstream 100 bases:

>100_bases
GCACCCGGATTCCCTTTCGGAAAGGGCAATCGAGGTGGCGCAGCATTCTCTCCGCTTCGAAAAAGATCATCGATAATCAG
TATAGGGAAAGGGGCAACAC

Downstream 100 bases:

>100_bases
CTTTGCCTGCAGGTCGCACGGCTTGACTTTCGCGGTCGCCGAATTAAGGTTTTCCGATCTTTAAACCAACCTTAATAGGA
GGACATCGAAATGCTCGAAA

Product: NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD-Dependent Epimerase/Dehydratase Family Protein; Epimerase; Actc Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; NAD-Dependent Epimerase

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MEQLLIVGCGAIGRRVAALALARGMKVSSFRRNEEEVAGATTYTGNLDQPATLAGLPVKGAGVIYLAPPPGGGNEDTRMR
NFLASIAPGQEPEKMVYISTSAVYGDCGTATVTEESEANPQTSRGKRRLHAERLLSDWGRERHVPVVILRVTAIYAADRL
PVTQLTTGQPVLREEESLPSNRIHADDLSRICLAALERGKDGAIFNVSDGQSTTMTSYFNAAADRLGLPRPRQVAMEEAR
RVMSPLMISYFSEGRVVSNRKMIEELGIELLYPDLESGLKG

Sequences:

>Translated_281_residues
MEQLLIVGCGAIGRRVAALALARGMKVSSFRRNEEEVAGATTYTGNLDQPATLAGLPVKGAGVIYLAPPPGGGNEDTRMR
NFLASIAPGQEPEKMVYISTSAVYGDCGTATVTEESEANPQTSRGKRRLHAERLLSDWGRERHVPVVILRVTAIYAADRL
PVTQLTTGQPVLREEESLPSNRIHADDLSRICLAALERGKDGAIFNVSDGQSTTMTSYFNAAADRLGLPRPRQVAMEEAR
RVMSPLMISYFSEGRVVSNRKMIEELGIELLYPDLESGLKG
>Mature_281_residues
MEQLLIVGCGAIGRRVAALALARGMKVSSFRRNEEEVAGATTYTGNLDQPATLAGLPVKGAGVIYLAPPPGGGNEDTRMR
NFLASIAPGQEPEKMVYISTSAVYGDCGTATVTEESEANPQTSRGKRRLHAERLLSDWGRERHVPVVILRVTAIYAADRL
PVTQLTTGQPVLREEESLPSNRIHADDLSRICLAALERGKDGAIFNVSDGQSTTMTSYFNAAADRLGLPRPRQVAMEEAR
RVMSPLMISYFSEGRVVSNRKMIEELGIELLYPDLESGLKG

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30487; Mature: 30487

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLLIVGCGAIGRRVAALALARGMKVSSFRRNEEEVAGATTYTGNLDQPATLAGLPVKG
CCCEEEECCCHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCEEECCCCCCCCEEECCCCCC
AGVIYLAPPPGGGNEDTRMRNFLASIAPGQEPEKMVYISTSAVYGDCGTATVTEESEANP
CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECEEECCCCCCEECCCCCCCC
QTSRGKRRLHAERLLSDWGRERHVPVVILRVTAIYAADRLPVTQLTTGQPVLREEESLPS
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCEEECCCCCHHHHHHCCCC
NRIHADDLSRICLAALERGKDGAIFNVSDGQSTTMTSYFNAAADRLGLPRPRQVAMEEAR
CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RVMSPLMISYFSEGRVVSNRKMIEELGIELLYPDLESGLKG
HHHHHHHHHHHCCCCEEHHHHHHHHCCCEEECCCHHCCCCC
>Mature Secondary Structure
MEQLLIVGCGAIGRRVAALALARGMKVSSFRRNEEEVAGATTYTGNLDQPATLAGLPVKG
CCCEEEECCCHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCEEECCCCCCCCEEECCCCCC
AGVIYLAPPPGGGNEDTRMRNFLASIAPGQEPEKMVYISTSAVYGDCGTATVTEESEANP
CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECEEECCCCCCEECCCCCCCC
QTSRGKRRLHAERLLSDWGRERHVPVVILRVTAIYAADRLPVTQLTTGQPVLREEESLPS
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCEEECCCCCHHHHHHCCCC
NRIHADDLSRICLAALERGKDGAIFNVSDGQSTTMTSYFNAAADRLGLPRPRQVAMEEAR
CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RVMSPLMISYFSEGRVVSNRKMIEELGIELLYPDLESGLKG
HHHHHHHHHHHCCCCEEHHHHHHHHCCCEEECCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA