| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118237
Identifier: 197118237
GI number: 197118237
Start: 2148484
End: 2149563
Strand: Direct
Name: 197118237
Synonym: Gbem_1854
Alternate gene names: NA
Gene position: 2148484-2149563 (Clockwise)
Preceding gene: 197118236
Following gene: 197118238
Centisome position: 46.55
GC content: 61.85
Gene sequence:
>1080_bases ATGGCTGGACTGGTTTTGCCAAGGGTATTGAGGACGGTAGCCGGGCATCCTGCGCTCGTTGAGGTAGCCTGCGCAGCCGC CGGGCTGTTGCGCCAGATGTCGATTAAACCTTTCCACCCCTCGGTGAGGAAGAGGGAGCTGGAACTGAGGGACCTGGTGA GTCTCCACGCCTGTCGCGCCTTGGTGTTCAAAGAGAAGGGGGCGGGGAACGTGCCGACCATCGTGGTCGGCGGCTTCGTG CCCGATGCCACCGAGCAGGTTGAGTTCCAGCGCTCGCTGCTCAGGGAATACGGCAGCATCTACTACATCAACTACCCGCG CCACGGCTTCAGCACCGAGCTGTTCTTCGCGCAGTTAGCGGACCTGATCGAGGCCATCAACAACCGGGACCAGAAACCGG TCCTCTTCGGCGTAAGCTTCGGGTGCGGCCTGATCGCGCGTTTCCTGCAGGAGAATCGGGACTCTAAGCTCCTCCGGATC CGTGGGGTGGTCATGGCAAGCCCGGTTCTTTGCGCCGAAGACCTGATCCGCCCGGTTCGTGAAAAAGGGGAGGGGGTCAG GATGCTGGAAAGTAACCTGCGGCGGATTCTTGGGCGTGCCGATAACGACGGCGAAGGGATCGGACGCCAGATCGAGCGCG CCAGGAAATGTTTCCAGTCGCTGTTCGAAATCGGTGCCCAGAACCGTTCCCTTTCCAGCAGGCACCTCTCGATCAAAAAG AAGATCATGCAGGTCATCGAAGAGACCCCTGCCGTGGGGGGGTACCAGCGCGTCCTGGCTCTGAAGCAGTTCGTGCGGCC GGCGGGGGAGCGCCCGATATTCTGGGGAGCCGCCCTGACCCTTCTTGCCGAGGAGGAGGAAAACCTACTGGTCCCGACCT CCCCCACCCTGGGGCTTTTAGGCCACCCGCAGCAGAGGAAGACCCTCTTTCCCAACGGCGTGGTCAGACGGGTGATTTCC GACGTCGCAGGGGACGCAGTCGCCCACGCCTCCCTGATTTTTCACCACCGCTGCTACAACCCGCTGATCCGGGAGTGGTA CGAAAACCTGCTTCCCGCCAAGCTTAGCGAGGCTGTCTGA
Upstream 100 bases:
>100_bases TCCCTATTACTGCCGAAAAGCTACATAACATTGTCCCGATTGCCACAACCCCGTAACGCTCCTTGTTCATAATGAAAAAA AACGAACAAGGAGGAACGAT
Downstream 100 bases:
>100_bases TGATGTTCAGCGATACCCTGAAGGCCGCCGCAGTTCCGGTTTTCGACCGCCTGGTCAAGGCGGGCGCCGCATTGCACGCT TCGCGTCTGGCCGGCAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MAGLVLPRVLRTVAGHPALVEVACAAAGLLRQMSIKPFHPSVRKRELELRDLVSLHACRALVFKEKGAGNVPTIVVGGFV PDATEQVEFQRSLLREYGSIYYINYPRHGFSTELFFAQLADLIEAINNRDQKPVLFGVSFGCGLIARFLQENRDSKLLRI RGVVMASPVLCAEDLIRPVREKGEGVRMLESNLRRILGRADNDGEGIGRQIERARKCFQSLFEIGAQNRSLSSRHLSIKK KIMQVIEETPAVGGYQRVLALKQFVRPAGERPIFWGAALTLLAEEEENLLVPTSPTLGLLGHPQQRKTLFPNGVVRRVIS DVAGDAVAHASLIFHHRCYNPLIREWYENLLPAKLSEAV
Sequences:
>Translated_359_residues MAGLVLPRVLRTVAGHPALVEVACAAAGLLRQMSIKPFHPSVRKRELELRDLVSLHACRALVFKEKGAGNVPTIVVGGFV PDATEQVEFQRSLLREYGSIYYINYPRHGFSTELFFAQLADLIEAINNRDQKPVLFGVSFGCGLIARFLQENRDSKLLRI RGVVMASPVLCAEDLIRPVREKGEGVRMLESNLRRILGRADNDGEGIGRQIERARKCFQSLFEIGAQNRSLSSRHLSIKK KIMQVIEETPAVGGYQRVLALKQFVRPAGERPIFWGAALTLLAEEEENLLVPTSPTLGLLGHPQQRKTLFPNGVVRRVIS DVAGDAVAHASLIFHHRCYNPLIREWYENLLPAKLSEAV >Mature_358_residues AGLVLPRVLRTVAGHPALVEVACAAAGLLRQMSIKPFHPSVRKRELELRDLVSLHACRALVFKEKGAGNVPTIVVGGFVP DATEQVEFQRSLLREYGSIYYINYPRHGFSTELFFAQLADLIEAINNRDQKPVLFGVSFGCGLIARFLQENRDSKLLRIR GVVMASPVLCAEDLIRPVREKGEGVRMLESNLRRILGRADNDGEGIGRQIERARKCFQSLFEIGAQNRSLSSRHLSIKKK IMQVIEETPAVGGYQRVLALKQFVRPAGERPIFWGAALTLLAEEEENLLVPTSPTLGLLGHPQQRKTLFPNGVVRRVISD VAGDAVAHASLIFHHRCYNPLIREWYENLLPAKLSEAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40012; Mature: 39881
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLVLPRVLRTVAGHPALVEVACAAAGLLRQMSIKPFHPSVRKRELELRDLVSLHACRA CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LVFKEKGAGNVPTIVVGGFVPDATEQVEFQRSLLREYGSIYYINYPRHGFSTELFFAQLA HHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH DLIEAINNRDQKPVLFGVSFGCGLIARFLQENRDSKLLRIRGVVMASPVLCAEDLIRPVR HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH EKGEGVRMLESNLRRILGRADNDGEGIGRQIERARKCFQSLFEIGAQNRSLSSRHLSIKK HCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH KIMQVIEETPAVGGYQRVLALKQFVRPAGERPIFWGAALTLLAEEEENLLVPTSPTLGLL HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCEECCCCCCCCCC GHPQQRKTLFPNGVVRRVISDVAGDAVAHASLIFHHRCYNPLIREWYENLLPAKLSEAV CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure AGLVLPRVLRTVAGHPALVEVACAAAGLLRQMSIKPFHPSVRKRELELRDLVSLHACRA CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LVFKEKGAGNVPTIVVGGFVPDATEQVEFQRSLLREYGSIYYINYPRHGFSTELFFAQLA HHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH DLIEAINNRDQKPVLFGVSFGCGLIARFLQENRDSKLLRIRGVVMASPVLCAEDLIRPVR HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH EKGEGVRMLESNLRRILGRADNDGEGIGRQIERARKCFQSLFEIGAQNRSLSSRHLSIKK HCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH KIMQVIEETPAVGGYQRVLALKQFVRPAGERPIFWGAALTLLAEEEENLLVPTSPTLGLL HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCEECCCCCCCCCC GHPQQRKTLFPNGVVRRVISDVAGDAVAHASLIFHHRCYNPLIREWYENLLPAKLSEAV CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA