| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118236
Identifier: 197118236
GI number: 197118236
Start: 2147286
End: 2148350
Strand: Direct
Name: 197118236
Synonym: Gbem_1853
Alternate gene names: NA
Gene position: 2147286-2148350 (Clockwise)
Preceding gene: 197118235
Following gene: 197118237
Centisome position: 46.53
GC content: 64.6
Gene sequence:
>1065_bases ATGAATGCTGATGACCTGCTTTCCTTGTCCGACGAAACCGCTGTCTACCGCTTCCGGAAGTGCCATCGGTTTCATCCCGT GGTAAAGCAGCGGTCCCGGCTCTTTACCCCCATTGTTCCCTGCCTTGCAGGTGTCGGCTGTCTGTACCAGGCGCTGGCCA GTCTGCGGGACCGGCGCGAGTACGCTCCGCCCGGGACGCTGGTGAGCGGGGGCGACTGTCATCTCCATTTGTTCTCCGCA GGCGAGGGGGCACCCTCGGTGATCCTCGAGTCGGGCCTGGGTGGGATGTGCTCGGGGTGGACCTGGGTCCACTCGGAGGT GGCCAGGTTTTCCCGTGTCGTTTCTTACGACAGGGCGGGACTTGGCTGGAGCGGTCCGGATCCCGGCCGCAAATCGGCCG TAGTTGCGGCGTGTCGGCTGCGCGCCGCATTGAGGCAGGCAGGGATACACCCGCCTTTCGTGCTCGTCGGTCACTCCATG GGAGGGCTTTTCGTTCGGGTTTTCGCCGATCTGTTCCGTTACGAGACAGCGGGAATGGTGCTGGTCGATGCGGTCCATCC CGACCAGCACCTGCGCAGTTCCGCGATCCGGACCCACATGAACTCTGGGTTTCGTTTTCTGAGGGCGGTTCCTTTTCTGG CTCGGCTGGGTTACATCCGCCTCTCGCGGTTTTTTCGCGACTGGGGGGACGGGCTCCCGGCCCGCCAGGCGGCCGAGGCT GAGGCGATGCTCGCGGACTGCCGCCACCTGAGGAGCACGCTCGAGGAATCTCTTGCCTGGAAGGAGATCTGTGCCGAGGT CCGCTGCGTCGGTGAGCTGGGGGACCTGCCGCTGGCGGTGGTCACGGCCGGTAGTGACGTGCTGCCTGGTCAGCCGGAAC TGCAAAACGAACTTGCGGCGCTCTCCTCCGATAGCGTCCATGTCATCGTCAAAAGGGCGGACCACGTGACGCTGGTGACG CGTCGGGAGTATGCCCTGCGGGTAGTGGACGCGGTCCGGCACGTGGTCCGCAGAACCACCTCGGCCCCAGATAAGACCTC GATCCGCGGCTGCTTTCTCCGGTGA
Upstream 100 bases:
>100_bases AAAAAAACCCATTAAACGTTTACACAGAATGGTGCTCGGTAAATAGATTGTTTCCCAGAGGCGATGGCGCGGCAGCTTGC TTCCTGCAGGAGGTTTGCCT
Downstream 100 bases:
>100_bases AAACCCTTGTGGGCCCATCCCGCCACCGGAATCTCCCTATTACTGCCGAAAAGCTACATAACATTGTCCCGATTGCCACA ACCCCGTAACGCTCCTTGTT
Product: alpha/beta hydrolase superfamily protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Fold Superfamily Hydrolase; Protein Containing Alpha/Beta Hydrolase Fold; Hydrolase Or Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Hydrolase Or Acyltransferase-Like Protein; Alpa/Beta Hydrolase-Thioesterase
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MNADDLLSLSDETAVYRFRKCHRFHPVVKQRSRLFTPIVPCLAGVGCLYQALASLRDRREYAPPGTLVSGGDCHLHLFSA GEGAPSVILESGLGGMCSGWTWVHSEVARFSRVVSYDRAGLGWSGPDPGRKSAVVAACRLRAALRQAGIHPPFVLVGHSM GGLFVRVFADLFRYETAGMVLVDAVHPDQHLRSSAIRTHMNSGFRFLRAVPFLARLGYIRLSRFFRDWGDGLPARQAAEA EAMLADCRHLRSTLEESLAWKEICAEVRCVGELGDLPLAVVTAGSDVLPGQPELQNELAALSSDSVHVIVKRADHVTLVT RREYALRVVDAVRHVVRRTTSAPDKTSIRGCFLR
Sequences:
>Translated_354_residues MNADDLLSLSDETAVYRFRKCHRFHPVVKQRSRLFTPIVPCLAGVGCLYQALASLRDRREYAPPGTLVSGGDCHLHLFSA GEGAPSVILESGLGGMCSGWTWVHSEVARFSRVVSYDRAGLGWSGPDPGRKSAVVAACRLRAALRQAGIHPPFVLVGHSM GGLFVRVFADLFRYETAGMVLVDAVHPDQHLRSSAIRTHMNSGFRFLRAVPFLARLGYIRLSRFFRDWGDGLPARQAAEA EAMLADCRHLRSTLEESLAWKEICAEVRCVGELGDLPLAVVTAGSDVLPGQPELQNELAALSSDSVHVIVKRADHVTLVT RREYALRVVDAVRHVVRRTTSAPDKTSIRGCFLR >Mature_354_residues MNADDLLSLSDETAVYRFRKCHRFHPVVKQRSRLFTPIVPCLAGVGCLYQALASLRDRREYAPPGTLVSGGDCHLHLFSA GEGAPSVILESGLGGMCSGWTWVHSEVARFSRVVSYDRAGLGWSGPDPGRKSAVVAACRLRAALRQAGIHPPFVLVGHSM GGLFVRVFADLFRYETAGMVLVDAVHPDQHLRSSAIRTHMNSGFRFLRAVPFLARLGYIRLSRFFRDWGDGLPARQAAEA EAMLADCRHLRSTLEESLAWKEICAEVRCVGELGDLPLAVVTAGSDVLPGQPELQNELAALSSDSVHVIVKRADHVTLVT RREYALRVVDAVRHVVRRTTSAPDKTSIRGCFLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38906; Mature: 38906
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNADDLLSLSDETAVYRFRKCHRFHPVVKQRSRLFTPIVPCLAGVGCLYQALASLRDRRE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YAPPGTLVSGGDCHLHLFSAGEGAPSVILESGLGGMCSGWTWVHSEVARFSRVVSYDRAG CCCCCCEECCCCEEEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC LGWSGPDPGRKSAVVAACRLRAALRQAGIHPPFVLVGHSMGGLFVRVFADLFRYETAGMV CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEE LVDAVHPDQHLRSSAIRTHMNSGFRFLRAVPFLARLGYIRLSRFFRDWGDGLPARQAAEA EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH EAMLADCRHLRSTLEESLAWKEICAEVRCVGELGDLPLAVVTAGSDVLPGQPELQNELAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHH LSSDSVHVIVKRADHVTLVTRREYALRVVDAVRHVVRRTTSAPDKTSIRGCFLR HCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNADDLLSLSDETAVYRFRKCHRFHPVVKQRSRLFTPIVPCLAGVGCLYQALASLRDRRE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YAPPGTLVSGGDCHLHLFSAGEGAPSVILESGLGGMCSGWTWVHSEVARFSRVVSYDRAG CCCCCCEECCCCEEEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC LGWSGPDPGRKSAVVAACRLRAALRQAGIHPPFVLVGHSMGGLFVRVFADLFRYETAGMV CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEE LVDAVHPDQHLRSSAIRTHMNSGFRFLRAVPFLARLGYIRLSRFFRDWGDGLPARQAAEA EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH EAMLADCRHLRSTLEESLAWKEICAEVRCVGELGDLPLAVVTAGSDVLPGQPELQNELAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHH LSSDSVHVIVKRADHVTLVTRREYALRVVDAVRHVVRRTTSAPDKTSIRGCFLR HCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA