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The map label for this gene is 197118238

Identifier: 197118238

GI number: 197118238

Start: 2149563

End: 2151155

Strand: Direct

Name: 197118238

Synonym: Gbem_1855

Alternate gene names: NA

Gene position: 2149563-2151155 (Clockwise)

Preceding gene: 197118237

Following gene: 197118239

Centisome position: 46.58

GC content: 66.73

Gene sequence:

>1593_bases
ATGATGTTCAGCGATACCCTGAAGGCCGCCGCAGTTCCGGTTTTCGACCGCCTGGTCAAGGCGGGCGCCGCATTGCACGC
TTCGCGTCTGGCCGGCAGCGACTCCGTCGCCGCGCAGCGGCGCATCTTCAGCCGCCTGCTGGCGCGCGGGGCCTCGACCA
GGTTCGGCGCGGATTACGGGCTGTCCGAACTCGCCTCTTTGCCCTTCGCGCAAGCCTATGACCTGTTCCGCTCCCGCGTG
CCGGTGCGCAGCTACGAGGAGTTCTGGAACGACTACTTCCGTTACGGCGCCCGCGAGTCGGGCGGCAGGGTGACTCTGGC
GCTTGAAAACGTCACCTGGCCGGGGAGGGTCCCCTTTTTCTGCGAGACCTCCGGTACCACGGCCCCCAGCAAGTTCATAC
CCTTCACCACGGAGATGTTCGCTGCCAACCGGCGCGCCGCCCTGGACCTGACCTCCTGCTATCTGGGCGCGAACCGCCGC
AGCAGGCTCATGGAAGGTAAATTCCTGTATCTGGCCGGCAACACCGAGCTTACCGACCGGGGCGAAGGGGTCTTAAGCGG
CGACATGAGCGCGATAACTCTGCGCTACCGCCCTTCCTACCTGAAACCTTTCATAGCGCCCGATGCGGCGACCGCGAGGC
TCCCCTGGGAGGAAAAAGTGGAGCGGCTGGCGGAGCTTTTGCTGCGGGATACGTCGATACGCGGCATCTCCGGCGTTCCC
CCCTGGATACTGCTGCTGCTGAACCGCTGCCGGGAGCTCGGTGGAGCGCCGCTGGCCACGCTGCTGCCGAACCTGGAACT
GATCGTGCACGGCGGCACCAGCATGAAGCCGTACCTGCAGGAGTTCGAGCAGCTCTTCCCGGCCAGCGCTCCCAAATTCC
TGGAAGTGCTTCCCTCCTCGGAGGCCTTCATGGCTTTCCAGCGGCCGGGCGAGAACCGGATGCGGCTGACCCCCTACTAC
GGCGCCTTCTTCGAATTCGCGCCGTGCGACGAGTTGGAGGGGGGGCGGCCGGCGCCGGACGCCCGCTGCGTGCCGCTGGA
GGAGGTGGAGGTCGGGCGCCGCTATGCCGTGATCCTGACCACCTGCGCCGGGCTTTGGCGCTACCATATCGGCGACACCC
TGCGCTGCACCGATCGGGAACACCTCTTCATCGAGTTCACCGGGAGGGACCGTTTCCTGGACCGGTTCGAGGAGAAGGTG
ACCCAGGGGGAAGTCGAGGAGGCGGTCGCCCGGCTCAACCTGATGCCGGGGGTGGAGATCCGGGAGTTCATGGTCGGTCC
CCAGATCGGGAGCCGCCGCCACCTCTGGGTCCTCGCCTTGGCCGCCGGCTCGACCTTGTCCGCCGAGATGCTGGCCGGGC
ACCTGGACGCTTCGCTGAACGGCATGAACGCCGATTACCGCACCTTCCGCGAACAGGGACGGATCAAGCCTCCCCTGGTT
CTGACGGTGCCCGAGGGGGAGATCTACCGCTGGTCCAAGGAGGTGCGGGGGAAACTTGGGGGGCAGAGCAAGATCCCCCA
TGTGGATCCGACCCTGGAGGGGGATCTGGTCGCGAGCCTGGCGCGCTACTGCGGGGCTGGCGGCGCACGGTAA

Upstream 100 bases:

>100_bases
TCGCCCACGCCTCCCTGATTTTTCACCACCGCTGCTACAACCCGCTGATCCGGGAGTGGTACGAAAACCTGCTTCCCGCC
AAGCTTAGCGAGGCTGTCTG

Downstream 100 bases:

>100_bases
TGGCGGCCAGGTTTGGATGGGGAGCGCTAAGGGGGGCGGCGGCTGCCGTGGTCGGTTCCGGGATGTCCCCCGGCAAGCTG
TCGTTGACCATCTGCCTGGG

Product: GH3 family protein

Products: NA

Alternate protein names: Auxin-Regulated Protein; GH3 Auxin-Responsive Promoter Family Protein; Gh3 Auxin-Responsive Promoter; Plant Auxin-Regulated Protein; Gh3 AuxiN-Responsive Promoter; GH3 Auxin-Responsive Promoter Superfamily Protein; Auxin-Regulated Like; GH3 Family Protein

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MMFSDTLKAAAVPVFDRLVKAGAALHASRLAGSDSVAAQRRIFSRLLARGASTRFGADYGLSELASLPFAQAYDLFRSRV
PVRSYEEFWNDYFRYGARESGGRVTLALENVTWPGRVPFFCETSGTTAPSKFIPFTTEMFAANRRAALDLTSCYLGANRR
SRLMEGKFLYLAGNTELTDRGEGVLSGDMSAITLRYRPSYLKPFIAPDAATARLPWEEKVERLAELLLRDTSIRGISGVP
PWILLLLNRCRELGGAPLATLLPNLELIVHGGTSMKPYLQEFEQLFPASAPKFLEVLPSSEAFMAFQRPGENRMRLTPYY
GAFFEFAPCDELEGGRPAPDARCVPLEEVEVGRRYAVILTTCAGLWRYHIGDTLRCTDREHLFIEFTGRDRFLDRFEEKV
TQGEVEEAVARLNLMPGVEIREFMVGPQIGSRRHLWVLALAAGSTLSAEMLAGHLDASLNGMNADYRTFREQGRIKPPLV
LTVPEGEIYRWSKEVRGKLGGQSKIPHVDPTLEGDLVASLARYCGAGGAR

Sequences:

>Translated_530_residues
MMFSDTLKAAAVPVFDRLVKAGAALHASRLAGSDSVAAQRRIFSRLLARGASTRFGADYGLSELASLPFAQAYDLFRSRV
PVRSYEEFWNDYFRYGARESGGRVTLALENVTWPGRVPFFCETSGTTAPSKFIPFTTEMFAANRRAALDLTSCYLGANRR
SRLMEGKFLYLAGNTELTDRGEGVLSGDMSAITLRYRPSYLKPFIAPDAATARLPWEEKVERLAELLLRDTSIRGISGVP
PWILLLLNRCRELGGAPLATLLPNLELIVHGGTSMKPYLQEFEQLFPASAPKFLEVLPSSEAFMAFQRPGENRMRLTPYY
GAFFEFAPCDELEGGRPAPDARCVPLEEVEVGRRYAVILTTCAGLWRYHIGDTLRCTDREHLFIEFTGRDRFLDRFEEKV
TQGEVEEAVARLNLMPGVEIREFMVGPQIGSRRHLWVLALAAGSTLSAEMLAGHLDASLNGMNADYRTFREQGRIKPPLV
LTVPEGEIYRWSKEVRGKLGGQSKIPHVDPTLEGDLVASLARYCGAGGAR
>Mature_530_residues
MMFSDTLKAAAVPVFDRLVKAGAALHASRLAGSDSVAAQRRIFSRLLARGASTRFGADYGLSELASLPFAQAYDLFRSRV
PVRSYEEFWNDYFRYGARESGGRVTLALENVTWPGRVPFFCETSGTTAPSKFIPFTTEMFAANRRAALDLTSCYLGANRR
SRLMEGKFLYLAGNTELTDRGEGVLSGDMSAITLRYRPSYLKPFIAPDAATARLPWEEKVERLAELLLRDTSIRGISGVP
PWILLLLNRCRELGGAPLATLLPNLELIVHGGTSMKPYLQEFEQLFPASAPKFLEVLPSSEAFMAFQRPGENRMRLTPYY
GAFFEFAPCDELEGGRPAPDARCVPLEEVEVGRRYAVILTTCAGLWRYHIGDTLRCTDREHLFIEFTGRDRFLDRFEEKV
TQGEVEEAVARLNLMPGVEIREFMVGPQIGSRRHLWVLALAAGSTLSAEMLAGHLDASLNGMNADYRTFREQGRIKPPLV
LTVPEGEIYRWSKEVRGKLGGQSKIPHVDPTLEGDLVASLARYCGAGGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58930; Mature: 58930

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFSDTLKAAAVPVFDRLVKAGAALHASRLAGSDSVAAQRRIFSRLLARGASTRFGADYG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
LSELASLPFAQAYDLFRSRVPVRSYEEFWNDYFRYGARESGGRVTLALENVTWPGRVPFF
HHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEE
CETSGTTAPSKFIPFTTEMFAANRRAALDLTSCYLGANRRSRLMEGKFLYLAGNTELTDR
EECCCCCCCCCCCCCHHHHHHCCCCHHEEHHHHHHCCCHHHHHCCCCEEEEECCCEECCC
GEGVLSGDMSAITLRYRPSYLKPFIAPDAATARLPWEEKVERLAELLLRDTSIRGISGVP
CCCEEECCCEEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PWILLLLNRCRELGGAPLATLLPNLELIVHGGTSMKPYLQEFEQLFPASAPKFLEVLPSS
HHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHCCCC
EAFMAFQRPGENRMRLTPYYGAFFEFAPCDELEGGRPAPDARCVPLEEVEVGRRYAVILT
HHEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEHHHH
TCAGLWRYHIGDTLRCTDREHLFIEFTGRDRFLDRFEEKVTQGEVEEAVARLNLMPGVEI
HHHHHHHHHCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
REFMVGPQIGSRRHLWVLALAAGSTLSAEMLAGHLDASLNGMNADYRTFREQGRIKPPLV
HHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEE
LTVPEGEIYRWSKEVRGKLGGQSKIPHVDPTLEGDLVASLARYCGAGGAR
EECCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMFSDTLKAAAVPVFDRLVKAGAALHASRLAGSDSVAAQRRIFSRLLARGASTRFGADYG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
LSELASLPFAQAYDLFRSRVPVRSYEEFWNDYFRYGARESGGRVTLALENVTWPGRVPFF
HHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEE
CETSGTTAPSKFIPFTTEMFAANRRAALDLTSCYLGANRRSRLMEGKFLYLAGNTELTDR
EECCCCCCCCCCCCCHHHHHHCCCCHHEEHHHHHHCCCHHHHHCCCCEEEEECCCEECCC
GEGVLSGDMSAITLRYRPSYLKPFIAPDAATARLPWEEKVERLAELLLRDTSIRGISGVP
CCCEEECCCEEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PWILLLLNRCRELGGAPLATLLPNLELIVHGGTSMKPYLQEFEQLFPASAPKFLEVLPSS
HHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHCCCC
EAFMAFQRPGENRMRLTPYYGAFFEFAPCDELEGGRPAPDARCVPLEEVEVGRRYAVILT
HHEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEHHHH
TCAGLWRYHIGDTLRCTDREHLFIEFTGRDRFLDRFEEKVTQGEVEEAVARLNLMPGVEI
HHHHHHHHHCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
REFMVGPQIGSRRHLWVLALAAGSTLSAEMLAGHLDASLNGMNADYRTFREQGRIKPPLV
HHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEE
LTVPEGEIYRWSKEVRGKLGGQSKIPHVDPTLEGDLVASLARYCGAGGAR
EECCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA