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The map label for this gene is 197118216

Identifier: 197118216

GI number: 197118216

Start: 2128272

End: 2129222

Strand: Reverse

Name: 197118216

Synonym: Gbem_1832

Alternate gene names: NA

Gene position: 2129222-2128272 (Counterclockwise)

Preceding gene: 197118217

Following gene: 197118215

Centisome position: 46.14

GC content: 55.63

Gene sequence:

>951_bases
ATGACTGCGACTTTGCTGCTGATCTTCGTTGCGGTTTTTCTGGGCACTTTCCCGCTCTTTTCCCTTTTCACGAGGGCGAG
ACACTCCTATCTGCTCAGGCACAGACTGAGAAAGATGGAGGGTGGTGCGACCAGAGGCACTGCAGAATCCGAGCATGTAC
TGTTGCCTGAACCGACAACTGCCGAGCGGGTTCTCGCGCGGCTTCCTCTAGCGGCGTTCTTCAAAAGACAGGTGGCGCTC
TCTGGGGTGAATATCTCCACCCTCGGTTTTTTGCTTTTCACGGGCTCCATCTCGGCCTTGGGCTTCATCGTTCTCTTTGC
CTGGAAAGAAAACGTCTTCCTTGCACTGCTGGCTGCTATGGCACTAGGGGCATTCCCCTTTGCCTATCTCAATTACCACA
GGAAGAAGCGCCGTAGACTCTTCGCCGAACAACTGCCGGATGCAATGGTGATGATGGCGCGCTCACTGAGGGCGGGGCAC
TCGCTGGCCGCGGCGGTGGAACTGATCGGTCTTGAATTGCCGGAACCGATAGGCGGGTTGTTCAAGTTGGCCTACGAACA
GCAGAAACTCGGCGTGCGAATAGCCGATTCCCTGATCTCGCTCCGCGAGAGAGTCGAAAGTCAGGACTTCAACTTTTTTT
TGACCGTCACCAGGATAAACAGCGAGTCGGGAGGGAACCTTTCCGAGATTCTGGATAAGCTGGCCGAGACGCTAAGATCC
CGGTTACAGATCCGCAGGCAGGTCGAGGTCATCACGGCCGAAGGGCGCATATCCGGATACGTGCTGGTCGCCCTGCCGGT
GGTTATGTTTGCGGGCTTATATCTGCTTCGTCCGGGTTACCTGGACGTGTTTTTCACCCAACGGCTCTGCCAGCTTATTC
TCGGTGCGGCGGTCCTGGGCCAGGTTGTCGGCTTTTTTATCATCAGGAAGATCGTGAACATATCCATCTAG

Upstream 100 bases:

>100_bases
AAGGCAGGTTCAGGGGAACCGGTGTTCGGCCAAGGCTTGCGGAACGCCTGAAGATCCACGGACTCTCCCTGGCGCCGGAA
ACATTTGAAGGGGACTAAAG

Downstream 100 bases:

>100_bases
GGGGGTACCTCATGCTAGCCCTGATCACCGCATCCATCTTCGCCAGTGTGACGGTACTGATCGGTGTGTTGCTATACCCT
TTGCTGAGCAGGCAAGAGTC

Product: Flp pilus assembly protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Integral Membrane Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Type II Secretion System Protein F; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; TadB Protein; Type II Secretion System F Domain; Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; Bacterial Type II Secretion System Protein F; Type II Secretion System; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II Secretion System F Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Secretion System Protein TadB; Sercretion System Protein; Tight Adherence TadB-Related Transmembrane Protein; Tight Adherence Protein B; Tight Adherance Operon Protein; Components Of Type IV Pilus; Bacterial Type II Secretion System Protein F Domain Protein; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTATLLLIFVAVFLGTFPLFSLFTRARHSYLLRHRLRKMEGGATRGTAESEHVLLPEPTTAERVLARLPLAAFFKRQVAL
SGVNISTLGFLLFTGSISALGFIVLFAWKENVFLALLAAMALGAFPFAYLNYHRKKRRRLFAEQLPDAMVMMARSLRAGH
SLAAAVELIGLELPEPIGGLFKLAYEQQKLGVRIADSLISLRERVESQDFNFFLTVTRINSESGGNLSEILDKLAETLRS
RLQIRRQVEVITAEGRISGYVLVALPVVMFAGLYLLRPGYLDVFFTQRLCQLILGAAVLGQVVGFFIIRKIVNISI

Sequences:

>Translated_316_residues
MTATLLLIFVAVFLGTFPLFSLFTRARHSYLLRHRLRKMEGGATRGTAESEHVLLPEPTTAERVLARLPLAAFFKRQVAL
SGVNISTLGFLLFTGSISALGFIVLFAWKENVFLALLAAMALGAFPFAYLNYHRKKRRRLFAEQLPDAMVMMARSLRAGH
SLAAAVELIGLELPEPIGGLFKLAYEQQKLGVRIADSLISLRERVESQDFNFFLTVTRINSESGGNLSEILDKLAETLRS
RLQIRRQVEVITAEGRISGYVLVALPVVMFAGLYLLRPGYLDVFFTQRLCQLILGAAVLGQVVGFFIIRKIVNISI
>Mature_315_residues
TATLLLIFVAVFLGTFPLFSLFTRARHSYLLRHRLRKMEGGATRGTAESEHVLLPEPTTAERVLARLPLAAFFKRQVALS
GVNISTLGFLLFTGSISALGFIVLFAWKENVFLALLAAMALGAFPFAYLNYHRKKRRRLFAEQLPDAMVMMARSLRAGHS
LAAAVELIGLELPEPIGGLFKLAYEQQKLGVRIADSLISLRERVESQDFNFFLTVTRINSESGGNLSEILDKLAETLRSR
LQIRRQVEVITAEGRISGYVLVALPVVMFAGLYLLRPGYLDVFFTQRLCQLILGAAVLGQVVGFFIIRKIVNISI

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35176; Mature: 35045

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATLLLIFVAVFLGTFPLFSLFTRARHSYLLRHRLRKMEGGATRGTAESEHVLLPEPTT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCH
AERVLARLPLAAFFKRQVALSGVNISTLGFLLFTGSISALGFIVLFAWKENVFLALLAAM
HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGAFPFAYLNYHRKKRRRLFAEQLPDAMVMMARSLRAGHSLAAAVELIGLELPEPIGGL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
FKLAYEQQKLGVRIADSLISLRERVESQDFNFFLTVTRINSESGGNLSEILDKLAETLRS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHH
RLQIRRQVEVITAEGRISGYVLVALPVVMFAGLYLLRPGYLDVFFTQRLCQLILGAAVLG
HHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QVVGFFIIRKIVNISI
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TATLLLIFVAVFLGTFPLFSLFTRARHSYLLRHRLRKMEGGATRGTAESEHVLLPEPTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCH
AERVLARLPLAAFFKRQVALSGVNISTLGFLLFTGSISALGFIVLFAWKENVFLALLAAM
HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGAFPFAYLNYHRKKRRRLFAEQLPDAMVMMARSLRAGHSLAAAVELIGLELPEPIGGL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
FKLAYEQQKLGVRIADSLISLRERVESQDFNFFLTVTRINSESGGNLSEILDKLAETLRS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHH
RLQIRRQVEVITAEGRISGYVLVALPVVMFAGLYLLRPGYLDVFFTQRLCQLILGAAVLG
HHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QVVGFFIIRKIVNISI
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA