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The map label for this gene is 197118215

Identifier: 197118215

GI number: 197118215

Start: 2127346

End: 2128260

Strand: Reverse

Name: 197118215

Synonym: Gbem_1831

Alternate gene names: NA

Gene position: 2128260-2127346 (Counterclockwise)

Preceding gene: 197118216

Following gene: 197118214

Centisome position: 46.11

GC content: 55.85

Gene sequence:

>915_bases
ATGCTAGCCCTGATCACCGCATCCATCTTCGCCAGTGTGACGGTACTGATCGGTGTGTTGCTATACCCTTTGCTGAGCAG
GCAAGAGTCGGTGAGGCAACGGCTGACAAAACTAATGCCGCAGCAAGAGGAAGAAGCCCCCCCCCTGGTGCCCACGCCAA
CGAAATGGCAGAGGACCCTTTCGGAACTGGGTATCAAACAGCAGATTAGACCTGCCGATCTCCGTACCTACCGCGAGGCG
GTCACAGCCGCTGGTTTCAAAAAAGAGGCCGTTTACGTCTTCCTGGGTGCCAAGCTGTTCTTGGCTTTTCTCCTGCCGGC
CGGCTACCTTATGCTTTTCGCGCTGCCACGGGGGACCATGGCCAGCAGTATCTCCATTCTCGTGGCGACCGCTTGCGCCG
TCGCAGGGTATCTTCTGCCTACCATTTGGCTTGATCGACGCGCTGGCGTCCGCAAAACCGCCATCTTCCATGCCCTTCCG
GACGTACTAGATCTGCTCACCGTTTGCGTCGAGGCAGGGCTCGGTCTCGATGCCGCTATTATCAAGACGGCTGAAAATTT
CCAGGAAAAGAACTGTCCTTTGATCGCGGAGTTCAACGCAGTCATCCTTGAAATACGTGCGGGACGACCCAGGTCCGAAG
CTCTCAAAGGGCTCGCGGAGAGGACGACCCTGGACGACATCAAGGCGCTGGTCTCCATGCTGATCCAGACGGAAAAGCTC
GGCACGAGTCTTGGAAAGACCCTGCGCATCTACTCCGACTCCCTGCGTACGAAGAGGAAGCAACTGGCAGAGGAGCGAGC
AGCAAAGACGGCAGTAAAAATGTTGTTCCCGCTTACCTTTTGCGTGTTCCCCGCCTTCATGGTGGTCCTGCTGGTACCGG
CTTTTTTCAGAATATTCCAAATGTTTAAACATTGA

Upstream 100 bases:

>100_bases
GGCTCTGCCAGCTTATTCTCGGTGCGGCGGTCCTGGGCCAGGTTGTCGGCTTTTTTATCATCAGGAAGATCGTGAACATA
TCCATCTAGGGGGGTACCTC

Downstream 100 bases:

>100_bases
TGAAGATTGGTCTCGGTAAGACGGAAAGGATTTGCCCTACACGTGCTGCAGGTAAGGACGGTCGTCGCGCCTCGGCGTTA
AATGGCCGTCATTCTACACG

Product: Flp pilus assembly protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Pilus Assembly Protein; Integral Membrane Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; Type II Secretion System; TadC Pilus Assembly Protein; TadC Family Type II/IV Secretion System Protein; Pilus Assembly Protein TadC; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Type II Secretion System Protein F Domain Protein; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Tight Adherence TadC Related Transmembrane Protein; Tight Adherence TadC-Related Transmembrane Protein; Component Of Type IV Pilus; Von Willebrand Factor Type A; Component Of Pilus Protein; Type II Secretion System Integral Membrane Subunit; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MLALITASIFASVTVLIGVLLYPLLSRQESVRQRLTKLMPQQEEEAPPLVPTPTKWQRTLSELGIKQQIRPADLRTYREA
VTAAGFKKEAVYVFLGAKLFLAFLLPAGYLMLFALPRGTMASSISILVATACAVAGYLLPTIWLDRRAGVRKTAIFHALP
DVLDLLTVCVEAGLGLDAAIIKTAENFQEKNCPLIAEFNAVILEIRAGRPRSEALKGLAERTTLDDIKALVSMLIQTEKL
GTSLGKTLRIYSDSLRTKRKQLAEERAAKTAVKMLFPLTFCVFPAFMVVLLVPAFFRIFQMFKH

Sequences:

>Translated_304_residues
MLALITASIFASVTVLIGVLLYPLLSRQESVRQRLTKLMPQQEEEAPPLVPTPTKWQRTLSELGIKQQIRPADLRTYREA
VTAAGFKKEAVYVFLGAKLFLAFLLPAGYLMLFALPRGTMASSISILVATACAVAGYLLPTIWLDRRAGVRKTAIFHALP
DVLDLLTVCVEAGLGLDAAIIKTAENFQEKNCPLIAEFNAVILEIRAGRPRSEALKGLAERTTLDDIKALVSMLIQTEKL
GTSLGKTLRIYSDSLRTKRKQLAEERAAKTAVKMLFPLTFCVFPAFMVVLLVPAFFRIFQMFKH
>Mature_304_residues
MLALITASIFASVTVLIGVLLYPLLSRQESVRQRLTKLMPQQEEEAPPLVPTPTKWQRTLSELGIKQQIRPADLRTYREA
VTAAGFKKEAVYVFLGAKLFLAFLLPAGYLMLFALPRGTMASSISILVATACAVAGYLLPTIWLDRRAGVRKTAIFHALP
DVLDLLTVCVEAGLGLDAAIIKTAENFQEKNCPLIAEFNAVILEIRAGRPRSEALKGLAERTTLDDIKALVSMLIQTEKL
GTSLGKTLRIYSDSLRTKRKQLAEERAAKTAVKMLFPLTFCVFPAFMVVLLVPAFFRIFQMFKH

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33683; Mature: 33683

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALITASIFASVTVLIGVLLYPLLSRQESVRQRLTKLMPQQEEEAPPLVPTPTKWQRTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
SELGIKQQIRPADLRTYREAVTAAGFKKEAVYVFLGAKLFLAFLLPAGYLMLFALPRGTM
HHCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ASSISILVATACAVAGYLLPTIWLDRRAGVRKTAIFHALPDVLDLLTVCVEAGLGLDAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IKTAENFQEKNCPLIAEFNAVILEIRAGRPRSEALKGLAERTTLDDIKALVSMLIQTEKL
HHHHHHHHHCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GTSLGKTLRIYSDSLRTKRKQLAEERAAKTAVKMLFPLTFCVFPAFMVVLLVPAFFRIFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFKH
HHCC
>Mature Secondary Structure
MLALITASIFASVTVLIGVLLYPLLSRQESVRQRLTKLMPQQEEEAPPLVPTPTKWQRTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
SELGIKQQIRPADLRTYREAVTAAGFKKEAVYVFLGAKLFLAFLLPAGYLMLFALPRGTM
HHCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ASSISILVATACAVAGYLLPTIWLDRRAGVRKTAIFHALPDVLDLLTVCVEAGLGLDAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IKTAENFQEKNCPLIAEFNAVILEIRAGRPRSEALKGLAERTTLDDIKALVSMLIQTEKL
HHHHHHHHHCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GTSLGKTLRIYSDSLRTKRKQLAEERAAKTAVKMLFPLTFCVFPAFMVVLLVPAFFRIFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFKH
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA