| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197118135
Identifier: 197118135
GI number: 197118135
Start: 2014719
End: 2015414
Strand: Reverse
Name: 197118135
Synonym: Gbem_1750
Alternate gene names: NA
Gene position: 2015414-2014719 (Counterclockwise)
Preceding gene: 197118137
Following gene: 197118134
Centisome position: 43.67
GC content: 52.73
Gene sequence:
>696_bases ATGAGAAATCGCCTCGTTAAGATATCACTCATACCGAGCCTGGTTCTGGTTGCCAATGTTGCCTGGGCAGCCCCTGAACT TTCTGTGGAACAGGGAACGTACAAATTCGGCACCGTCACTCAAGGCAAGAAGGTACAGCATAGCTTCAAGATCAGAAACA GCGGCGACGCTCCGCTGCAGATAAAGAAGATTGAAGTATCCTGCGGTTGCACCGCGGCCAAACCCTCTACTTCCACCATT CAGCCGGGAAAGAGTGCGCAAATCGACGTCGTCTTCGACTCTACCGAGTTCGGGGGGAAGGTCCTGAAGAGCGTAACCAT GCTCACCAATGCCAGCAAGACCCCCTCCTACACCTTCAACATGGAAGGAACAGTCTCCGAAGAACTTCAGGTAACCCCGC GGCAGTTGAGCCTCGGATCAGTGACGCCCGGTGTTGCCAAACTGGTCACCATCAATGTCACCAATAACGGCAGCAACAGC ATCAGGCTCATCGCTGTCAACGTGAATTCCAACACGCTGCAGATAAAGTCGACCATCGGGAAGAGTGAGTTGAAACCGGG AGAAACAGGCTCGGTGAATCTAAGCATACTGGGAAAGTCGGAATCGAAGATACTGAGCGGCTACGTGCACATAGTGACCA GCAGCGCCAAGAAGAAGGAGATCACCGTTCCCGTTTATGGCACCTTGGCGAAATAA
Upstream 100 bases:
>100_bases AGATGGATTTTGCAGTGTCAATTCATTCTGGCCCACTACGTCCCTTTGTGGTATAAATACCTCGAAATACTCAATCAACT CATTTAAAAGAGGTACTGAC
Downstream 100 bases:
>100_bases GCAGTCATCTTTTTTTCACTTAGGCCTTGAGTTGCTACAGGAAATGGTGTAATAGATAGTTCTTTGCCGGGCGGGTAGCT CAGTTGGATAGAGTACTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MRNRLVKISLIPSLVLVANVAWAAPELSVEQGTYKFGTVTQGKKVQHSFKIRNSGDAPLQIKKIEVSCGCTAAKPSTSTI QPGKSAQIDVVFDSTEFGGKVLKSVTMLTNASKTPSYTFNMEGTVSEELQVTPRQLSLGSVTPGVAKLVTINVTNNGSNS IRLIAVNVNSNTLQIKSTIGKSELKPGETGSVNLSILGKSESKILSGYVHIVTSSAKKKEITVPVYGTLAK
Sequences:
>Translated_231_residues MRNRLVKISLIPSLVLVANVAWAAPELSVEQGTYKFGTVTQGKKVQHSFKIRNSGDAPLQIKKIEVSCGCTAAKPSTSTI QPGKSAQIDVVFDSTEFGGKVLKSVTMLTNASKTPSYTFNMEGTVSEELQVTPRQLSLGSVTPGVAKLVTINVTNNGSNS IRLIAVNVNSNTLQIKSTIGKSELKPGETGSVNLSILGKSESKILSGYVHIVTSSAKKKEITVPVYGTLAK >Mature_231_residues MRNRLVKISLIPSLVLVANVAWAAPELSVEQGTYKFGTVTQGKKVQHSFKIRNSGDAPLQIKKIEVSCGCTAAKPSTSTI QPGKSAQIDVVFDSTEFGGKVLKSVTMLTNASKTPSYTFNMEGTVSEELQVTPRQLSLGSVTPGVAKLVTINVTNNGSNS IRLIAVNVNSNTLQIKSTIGKSELKPGETGSVNLSILGKSESKILSGYVHIVTSSAKKKEITVPVYGTLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24494; Mature: 24494
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNRLVKISLIPSLVLVANVAWAAPELSVEQGTYKFGTVTQGKKVQHSFKIRNSGDAPLQ CCCEEEEEEEHHHEEEHHHHHHCCCCCEECCCEEEEEECCCCCEEEEEEEEECCCCCCEE IKKIEVSCGCTAAKPSTSTIQPGKSAQIDVVFDSTEFGGKVLKSVTMLTNASKTPSYTFN EEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEE MEGTVSEELQVTPRQLSLGSVTPGVAKLVTINVTNNGSNSIRLIAVNVNSNTLQIKSTIG ECCCCCCCEEECCCEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCEEEEEECCC KSELKPGETGSVNLSILGKSESKILSGYVHIVTSSAKKKEITVPVYGTLAK CCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEEECC >Mature Secondary Structure MRNRLVKISLIPSLVLVANVAWAAPELSVEQGTYKFGTVTQGKKVQHSFKIRNSGDAPLQ CCCEEEEEEEHHHEEEHHHHHHCCCCCEECCCEEEEEECCCCCEEEEEEEEECCCCCCEE IKKIEVSCGCTAAKPSTSTIQPGKSAQIDVVFDSTEFGGKVLKSVTMLTNASKTPSYTFN EEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEE MEGTVSEELQVTPRQLSLGSVTPGVAKLVTINVTNNGSNSIRLIAVNVNSNTLQIKSTIG ECCCCCCCEEECCCEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCEEEEEECCC KSELKPGETGSVNLSILGKSESKILSGYVHIVTSSAKKKEITVPVYGTLAK CCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA