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The map label for this gene is intQ [C]

Identifier: 197118134

GI number: 197118134

Start: 2013194

End: 2014498

Strand: Reverse

Name: intQ [C]

Synonym: Gbem_1749

Alternate gene names: 197118134

Gene position: 2014498-2013194 (Counterclockwise)

Preceding gene: 197118135

Following gene: 308535261

Centisome position: 43.65

GC content: 53.26

Gene sequence:

>1305_bases
ATGGCCAACTATTTGCGTTTAAGGAACCAAAACTACTACCTCCGTATCAGAATCCCTGCTGACCTCCCTGGTATTTCCAC
ATCTGCAGAAATCCTAAAGTCACTACGCACCAGAGACCTTAAATCAGCCCGACTCTCTGCAGCTTCCTTGCTTCCTCAGT
TCCTCGGAGTCTTCACCCTTACCCGTTGTGGCTTCATCACCCCTATTCAAGCCTCAGAACGCCTATGCTCACTCCTCGGA
AGCAAGAAGGAGATATCCAGCACCATCCCAGCACAGGCAGAGAGTAACCTTGTAGAGCCCAAGATTGCAGCTCCACCGCC
CTCCCCCTCCATCGCCAGCATCATTCAAGAGTATGTCAACGACAACAAGTCAGCATGGACAGGTAAGACTCTGCTGGAGT
ATGGGAGCTACTGGCGGCTGCTCCAGGATGTCCTTGAGGTTGACACCGTGGCAGAGGTCACCCGCGAAGAGGTTAGGAAA
CTGAGGGATACCCTGTGCCGACTCCCAGCCAATCTCTACAAGAAACACCCAGGCAAGACCATCAAGGAAGTTCTAGCCCT
GGAGGGCATCACGCCGATGAGCACCACCACAGTCAACAAGCTCCTTACCCTGTTCGGCAGTCTCATGATTCATTGTGTCA
AGGAGGGATACAGGAGGGATAACCCTACAGAGGGGCTGAAGGTCAAACAGAAGAAGAGAGCTGATGAGGAGAGGAAAGCA
TACACCAGAGAGGACTTGAAGAAGATGGTCGCTGCTCTCCCCTCCCCTTCTGCCAAGCCTGAGCGGTACTGGGTGCCTTT
GATCGGCATGTACTCAGGGATGAGGCTGGGGGAAATCTGCGGTCTTCATGTCTCGGATGTGAGACAGGTTGACGGTGTCT
GGGTCTTCGATGTCAACGAGGAAGCCGATAAGAGACTTAAGACGGAGGCAAGCAAGCGCCTTGTGCCGATCCACCCGAAG
CTGATTGGCCTGGGACTACTCCGATATGTCGAGACGATGAAGGAAAGGAAGTCTGTGAGGATGTGGCCGAAGTTGGTCAG
AAGGGACAGTGATGGGTACTGTGCTGCGGTCGGGAACTGGTTCGGCAGGTTCAACCGGAAGCATGTCACAGAAGACCCTC
TCAAGAGTTTCCACTCCCTGAGACACGCCTTTGCCGACACCCTGAAACAGTTGGGGGTCCAGGAAAACCTTATCGCTGAA
CTGATGGGACACGCAAACGACAGCATCACAACAGGGAGGTATGGCAAGAGGTATCAGCCTAAGGTTTTACTTGAGGCATT
GTCAACGATGTGTTACCAACCCTGA

Upstream 100 bases:

>100_bases
GGTTCGAATCCCATCTCGCCCACCAACTTTTGTAAATCAGATAGTTGGCCATTCAAGCACACCGTGTACCCTCTTTTGCC
ACACAGAGGAGCGAGAGCTG

Downstream 100 bases:

>100_bases
ATCAGGAGGTCACTAATGATTAAGGCTGTCTCAATATTCCTGCTGTCGATTACGTTGTTTGGGTGTGACCAACAAAGTCC
GGTAGGTCGTTTTGTCCCAT

Product: integrase family protein

Products: NA

Alternate protein names: Integrase; Phage Integrase; Phage-Related Integrase; Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase; Phage Integerase; Site-Specific Recombinase Phage Integrase Family Protein; Integrase Domain-Containing Protein; Integrase Domain Protein SAM Domain Protein; Phage Integrase Family Recombinase Protein; Phage Integrase-Like Protein; Integrase/Resolvase Recombinase Protein; Prolidase (Xaa-Pro Dipeptidase

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MANYLRLRNQNYYLRIRIPADLPGISTSAEILKSLRTRDLKSARLSAASLLPQFLGVFTLTRCGFITPIQASERLCSLLG
SKKEISSTIPAQAESNLVEPKIAAPPPSPSIASIIQEYVNDNKSAWTGKTLLEYGSYWRLLQDVLEVDTVAEVTREEVRK
LRDTLCRLPANLYKKHPGKTIKEVLALEGITPMSTTTVNKLLTLFGSLMIHCVKEGYRRDNPTEGLKVKQKKRADEERKA
YTREDLKKMVAALPSPSAKPERYWVPLIGMYSGMRLGEICGLHVSDVRQVDGVWVFDVNEEADKRLKTEASKRLVPIHPK
LIGLGLLRYVETMKERKSVRMWPKLVRRDSDGYCAAVGNWFGRFNRKHVTEDPLKSFHSLRHAFADTLKQLGVQENLIAE
LMGHANDSITTGRYGKRYQPKVLLEALSTMCYQP

Sequences:

>Translated_434_residues
MANYLRLRNQNYYLRIRIPADLPGISTSAEILKSLRTRDLKSARLSAASLLPQFLGVFTLTRCGFITPIQASERLCSLLG
SKKEISSTIPAQAESNLVEPKIAAPPPSPSIASIIQEYVNDNKSAWTGKTLLEYGSYWRLLQDVLEVDTVAEVTREEVRK
LRDTLCRLPANLYKKHPGKTIKEVLALEGITPMSTTTVNKLLTLFGSLMIHCVKEGYRRDNPTEGLKVKQKKRADEERKA
YTREDLKKMVAALPSPSAKPERYWVPLIGMYSGMRLGEICGLHVSDVRQVDGVWVFDVNEEADKRLKTEASKRLVPIHPK
LIGLGLLRYVETMKERKSVRMWPKLVRRDSDGYCAAVGNWFGRFNRKHVTEDPLKSFHSLRHAFADTLKQLGVQENLIAE
LMGHANDSITTGRYGKRYQPKVLLEALSTMCYQP
>Mature_433_residues
ANYLRLRNQNYYLRIRIPADLPGISTSAEILKSLRTRDLKSARLSAASLLPQFLGVFTLTRCGFITPIQASERLCSLLGS
KKEISSTIPAQAESNLVEPKIAAPPPSPSIASIIQEYVNDNKSAWTGKTLLEYGSYWRLLQDVLEVDTVAEVTREEVRKL
RDTLCRLPANLYKKHPGKTIKEVLALEGITPMSTTTVNKLLTLFGSLMIHCVKEGYRRDNPTEGLKVKQKKRADEERKAY
TREDLKKMVAALPSPSAKPERYWVPLIGMYSGMRLGEICGLHVSDVRQVDGVWVFDVNEEADKRLKTEASKRLVPIHPKL
IGLGLLRYVETMKERKSVRMWPKLVRRDSDGYCAAVGNWFGRFNRKHVTEDPLKSFHSLRHAFADTLKQLGVQENLIAEL
MGHANDSITTGRYGKRYQPKVLLEALSTMCYQP

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49102; Mature: 48970

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANYLRLRNQNYYLRIRIPADLPGISTSAEILKSLRTRDLKSARLSAASLLPQFLGVFTL
CCCCCEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRCGFITPIQASERLCSLLGSKKEISSTIPAQAESNLVEPKIAAPPPSPSIASIIQEYVN
HHCCCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHC
DNKSAWTGKTLLEYGSYWRLLQDVLEVDTVAEVTREEVRKLRDTLCRLPANLYKKHPGKT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHH
IKEVLALEGITPMSTTTVNKLLTLFGSLMIHCVKEGYRRDNPTEGLKVKQKKRADEERKA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHH
YTREDLKKMVAALPSPSAKPERYWVPLIGMYSGMRLGEICGLHVSDVRQVDGVWVFDVNE
HHHHHHHHHHHHCCCCCCCCCCEECHHHHHHCCCHHHHHHCCCHHHHHHHCCEEEEECCH
EADKRLKTEASKRLVPIHPKLIGLGLLRYVETMKERKSVRMWPKLVRRDSDGYCAAVGNW
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHH
FGRFNRKHVTEDPLKSFHSLRHAFADTLKQLGVQENLIAELMGHANDSITTGRYGKRYQP
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCH
KVLLEALSTMCYQP
HHHHHHHHHHHCCC
>Mature Secondary Structure 
ANYLRLRNQNYYLRIRIPADLPGISTSAEILKSLRTRDLKSARLSAASLLPQFLGVFTL
CCCCEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRCGFITPIQASERLCSLLGSKKEISSTIPAQAESNLVEPKIAAPPPSPSIASIIQEYVN
HHCCCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHC
DNKSAWTGKTLLEYGSYWRLLQDVLEVDTVAEVTREEVRKLRDTLCRLPANLYKKHPGKT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHH
IKEVLALEGITPMSTTTVNKLLTLFGSLMIHCVKEGYRRDNPTEGLKVKQKKRADEERKA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHH
YTREDLKKMVAALPSPSAKPERYWVPLIGMYSGMRLGEICGLHVSDVRQVDGVWVFDVNE
HHHHHHHHHHHHCCCCCCCCCCEECHHHHHHCCCHHHHHHCCCHHHHHHHCCEEEEECCH
EADKRLKTEASKRLVPIHPKLIGLGLLRYVETMKERKSVRMWPKLVRRDSDGYCAAVGNW
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHH
FGRFNRKHVTEDPLKSFHSLRHAFADTLKQLGVQENLIAELMGHANDSITTGRYGKRYQP
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCH
KVLLEALSTMCYQP
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA