| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197117967
Identifier: 197117967
GI number: 197117967
Start: 1832873
End: 1834051
Strand: Reverse
Name: 197117967
Synonym: Gbem_1580
Alternate gene names: NA
Gene position: 1834051-1832873 (Counterclockwise)
Preceding gene: 197117968
Following gene: 197117964
Centisome position: 39.74
GC content: 65.06
Gene sequence:
>1179_bases ATGGACAAAGAGAACAACATCATGCTGGTCGGCGACATCATGCTCGACTTCGCCGGGAGCACCGGGCTTACCGACCCCGA CCGGGCGCCGCGGCGCTACCTGTGGACCGACGCCTTCGCCGTCTGCAACTTCCTGGAGCTTTACCGTCGCTCTCATGACG AAACCTGGCTGGAGCTGGCGCGGCAGTTAGTCGACCAGGTGCATCACGTCCTCGGGCGCCACCGGGACGACGGCCAAGCG AGCGGCTGGTTGAGCGGTCTCGACGAGCAGGAGGGAGAACTACACCCAACCATCGGGGGACTGAGGATAGGGAAGAAGCT TCCCGAGCGCGCCCCGGACGAGCCTGCAGACGAGCGCCTGGAGTGGGATCGCGACGGGCAGTATTACCACTACCTGACCA AGTGGATGCACGCGCTAAGCTGCATGACCCGGGTCGCCGGAGACGTCACCTACCTCAGGTGGGGCATGGAACTGGCCCGG ACCGCGCACCGCGCTTTCCGCTACGCCGCGACGCCGGAGGGGTCGCCTGCGCTGCAGTGGAAGATGAGCATCGACCTGAA GCGCCCGCAGGTCCGTTCCGCCGGGCTGCACGACCCGCTGGACGGCCTGGTCACCTACAGCGAATTGCGGTCGCTTGCGG GAGACTTCGCCGTAGACGGGCTGCCGGACCTGGGAGAGGAGATCGGGGAACTGGCGGCGATGTGCCGCGGCAAGAGCTTG GCCACCGACGACCCTTTAGGCATCGGGGGGTTACTGTGCGATGCCAACTGGATGGAGCTGCTGGTGATCAAAGGGGATTT TCAGCATCTGCGCCTCTTCCGGCAGGTACTGGACGACAGCCTGGCGAGCCTGGAGAGCGCGGGGGACGGTTTCCTGGAAC TTCCGGCGCGCTACCGGCTGGCGTTCCGCGAACTGGGATTGTCGATCGGGCTTAGGGGGGTAGCGAACCTGGCGAGGCTC GTGGTCGAGTTCCAGGAGGATCACGACCCCGATCTGCTCTTCGAGCTCACCCCACGCATCGAGGCGCTTACGCCACACCT GGCGATGGTGCCGAAGATAGAGCGGTTCTGGCGGGAGGAGCGGAACAAGGGGACCGAGCATTGGAAGGAGCACCGGGACA TCAACATGGTGATGCTGGCGACAAGCCTCGCCCCCGAGGAGTTTTTGCAGGCGGGTTAG
Upstream 100 bases:
>100_bases CAACGCCTATCACATCGGCGAGATCGCTATTATCCGGCAGGTACTGGGGCTGTGGCCCGCGGACAACAGGTACCTGACCG GCTGAGAGAAGGGAGCGGAC
Downstream 100 bases:
>100_bases GCATTGGCGCATTCACAGGTCATAGACGTTTCCGCCGCGCAAAAGCTCGACCCCCGGAAGACGCAGGGCCGCAAGCTCCG CCTCGATCCGGTCGTAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MDKENNIMLVGDIMLDFAGSTGLTDPDRAPRRYLWTDAFAVCNFLELYRRSHDETWLELARQLVDQVHHVLGRHRDDGQA SGWLSGLDEQEGELHPTIGGLRIGKKLPERAPDEPADERLEWDRDGQYYHYLTKWMHALSCMTRVAGDVTYLRWGMELAR TAHRAFRYAATPEGSPALQWKMSIDLKRPQVRSAGLHDPLDGLVTYSELRSLAGDFAVDGLPDLGEEIGELAAMCRGKSL ATDDPLGIGGLLCDANWMELLVIKGDFQHLRLFRQVLDDSLASLESAGDGFLELPARYRLAFRELGLSIGLRGVANLARL VVEFQEDHDPDLLFELTPRIEALTPHLAMVPKIERFWREERNKGTEHWKEHRDINMVMLATSLAPEEFLQAG
Sequences:
>Translated_392_residues MDKENNIMLVGDIMLDFAGSTGLTDPDRAPRRYLWTDAFAVCNFLELYRRSHDETWLELARQLVDQVHHVLGRHRDDGQA SGWLSGLDEQEGELHPTIGGLRIGKKLPERAPDEPADERLEWDRDGQYYHYLTKWMHALSCMTRVAGDVTYLRWGMELAR TAHRAFRYAATPEGSPALQWKMSIDLKRPQVRSAGLHDPLDGLVTYSELRSLAGDFAVDGLPDLGEEIGELAAMCRGKSL ATDDPLGIGGLLCDANWMELLVIKGDFQHLRLFRQVLDDSLASLESAGDGFLELPARYRLAFRELGLSIGLRGVANLARL VVEFQEDHDPDLLFELTPRIEALTPHLAMVPKIERFWREERNKGTEHWKEHRDINMVMLATSLAPEEFLQAG >Mature_392_residues MDKENNIMLVGDIMLDFAGSTGLTDPDRAPRRYLWTDAFAVCNFLELYRRSHDETWLELARQLVDQVHHVLGRHRDDGQA SGWLSGLDEQEGELHPTIGGLRIGKKLPERAPDEPADERLEWDRDGQYYHYLTKWMHALSCMTRVAGDVTYLRWGMELAR TAHRAFRYAATPEGSPALQWKMSIDLKRPQVRSAGLHDPLDGLVTYSELRSLAGDFAVDGLPDLGEEIGELAAMCRGKSL ATDDPLGIGGLLCDANWMELLVIKGDFQHLRLFRQVLDDSLASLESAGDGFLELPARYRLAFRELGLSIGLRGVANLARL VVEFQEDHDPDLLFELTPRIEALTPHLAMVPKIERFWREERNKGTEHWKEHRDINMVMLATSLAPEEFLQAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44423; Mature: 44423
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKENNIMLVGDIMLDFAGSTGLTDPDRAPRRYLWTDAFAVCNFLELYRRSHDETWLELA CCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RQLVDQVHHVLGRHRDDGQASGWLSGLDEQEGELHPTIGGLRIGKKLPERAPDEPADERL HHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHC EWDRDGQYYHYLTKWMHALSCMTRVAGDVTYLRWGMELARTAHRAFRYAATPEGSPALQW CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE KMSIDLKRPQVRSAGLHDPLDGLVTYSELRSLAGDFAVDGLPDLGEEIGELAAMCRGKSL EEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC ATDDPLGIGGLLCDANWMELLVIKGDFQHLRLFRQVLDDSLASLESAGDGFLELPARYRL CCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHH AFRELGLSIGLRGVANLARLVVEFQEDHDPDLLFELTPRIEALTPHLAMVPKIERFWREE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHH RNKGTEHWKEHRDINMVMLATSLAPEEFLQAG HCCCHHHHHHHCCCEEEEEEHHCCHHHHHHCC >Mature Secondary Structure MDKENNIMLVGDIMLDFAGSTGLTDPDRAPRRYLWTDAFAVCNFLELYRRSHDETWLELA CCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RQLVDQVHHVLGRHRDDGQASGWLSGLDEQEGELHPTIGGLRIGKKLPERAPDEPADERL HHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHC EWDRDGQYYHYLTKWMHALSCMTRVAGDVTYLRWGMELARTAHRAFRYAATPEGSPALQW CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE KMSIDLKRPQVRSAGLHDPLDGLVTYSELRSLAGDFAVDGLPDLGEEIGELAAMCRGKSL EEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC ATDDPLGIGGLLCDANWMELLVIKGDFQHLRLFRQVLDDSLASLESAGDGFLELPARYRL CCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHH AFRELGLSIGLRGVANLARLVVEFQEDHDPDLLFELTPRIEALTPHLAMVPKIERFWREE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHH RNKGTEHWKEHRDINMVMLATSLAPEEFLQAG HCCCHHHHHHHCCCEEEEEEHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA