Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117968

Identifier: 197117968

GI number: 197117968

Start: 1834067

End: 1834567

Strand: Reverse

Name: 197117968

Synonym: Gbem_1581

Alternate gene names: NA

Gene position: 1834567-1834067 (Counterclockwise)

Preceding gene: 197117971

Following gene: 197117967

Centisome position: 39.75

GC content: 63.07

Gene sequence:

>501_bases
ATGAAAGAGGACCGTTCGCTGAGAAAGGAACTCCTCGACCTGCTGGAAGGGGGCAACGCCCATTTCAGCTTCGAGGAGGT
GCTCGCCGGGCTGCCGCCGGATTCGATCAACCGGAAGCCCCCAAACACGCCCTACTCGCTCTGGCATTTCGTGGAGCACC
TGCGCATCGCCCAATGGGACATCCTGGAGTTCATCCGGAACCCGGCGCACGTCTCGCCGGACTACCCCTACGGTTACCGC
CCGGCCGCGGGTTGGAGAACCGACGTTGCCGGGTGGGAAAGAAGCTGTGCCGGGTTCCTGGCGGACCTCGAAGCGCTAAA
GGAACTGGTCAGGGACGAGCGGAACGACCTTCTGGCTCCGCTGCCGCACTCCCCCTCTTACAACATCTTGAGAGAGGTCG
TGCTGGCGGCCGACCACAACGCCTATCACATCGGCGAGATCGCTATTATCCGGCAGGTACTGGGGCTGTGGCCCGCGGAC
AACAGGTACCTGACCGGCTGA

Upstream 100 bases:

>100_bases
GTCAACGCTCATGATAAAGGCGACGCTCGCCTTTGCATTTATGAACCCGGGCCAGTAGAGTTAGGGTGTGAAAAATCAGA
GGCCGGCAAGGAGGGGTCAC

Downstream 100 bases:

>100_bases
GAGAAGGGAGCGGACATGGACAAAGAGAACAACATCATGCTGGTCGGCGACATCATGCTCGACTTCGCCGGGAGCACCGG
GCTTACCGACCCCGACCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKEDRSLRKELLDLLEGGNAHFSFEEVLAGLPPDSINRKPPNTPYSLWHFVEHLRIAQWDILEFIRNPAHVSPDYPYGYR
PAAGWRTDVAGWERSCAGFLADLEALKELVRDERNDLLAPLPHSPSYNILREVVLAADHNAYHIGEIAIIRQVLGLWPAD
NRYLTG

Sequences:

>Translated_166_residues
MKEDRSLRKELLDLLEGGNAHFSFEEVLAGLPPDSINRKPPNTPYSLWHFVEHLRIAQWDILEFIRNPAHVSPDYPYGYR
PAAGWRTDVAGWERSCAGFLADLEALKELVRDERNDLLAPLPHSPSYNILREVVLAADHNAYHIGEIAIIRQVLGLWPAD
NRYLTG
>Mature_166_residues
MKEDRSLRKELLDLLEGGNAHFSFEEVLAGLPPDSINRKPPNTPYSLWHFVEHLRIAQWDILEFIRNPAHVSPDYPYGYR
PAAGWRTDVAGWERSCAGFLADLEALKELVRDERNDLLAPLPHSPSYNILREVVLAADHNAYHIGEIAIIRQVLGLWPAD
NRYLTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18950; Mature: 18950

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEDRSLRKELLDLLEGGNAHFSFEEVLAGLPPDSINRKPPNTPYSLWHFVEHLRIAQWD
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ILEFIRNPAHVSPDYPYGYRPAAGWRTDVAGWERSCAGFLADLEALKELVRDERNDLLAP
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LPHSPSYNILREVVLAADHNAYHIGEIAIIRQVLGLWPADNRYLTG
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKEDRSLRKELLDLLEGGNAHFSFEEVLAGLPPDSINRKPPNTPYSLWHFVEHLRIAQWD
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ILEFIRNPAHVSPDYPYGYRPAAGWRTDVAGWERSCAGFLADLEALKELVRDERNDLLAP
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LPHSPSYNILREVVLAADHNAYHIGEIAIIRQVLGLWPADNRYLTG
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA