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The map label for this gene is etfA-2 [H]

Identifier: 197117854

GI number: 197117854

Start: 1698219

End: 1699562

Strand: Direct

Name: etfA-2 [H]

Synonym: Gbem_1467

Alternate gene names: 197117854

Gene position: 1698219-1699562 (Clockwise)

Preceding gene: 197117853

Following gene: 197117855

Centisome position: 36.8

GC content: 64.81

Gene sequence:

>1344_bases
ATGCAAAACGAGAAGAAGATCAAGAAACCACGCGGCATAGCACGGCTGGTAGCCGGCAAGTGCATAGCCTGCGGAGCCCG
GTGCGAGAGTTCCTGCCCGGTAAGCGGCATCCAGATGAGCGAGGCCGGTGAGCCCTCTATCGTCGACGGGAAGTGCATCG
GCTGCGCCAAGTGCGTCAAGGTCTGTGCCGCCGGCGCCCTGGAGATGTTCTACACCCCCGAGGAGCTGGAGCTGCTGAAA
CAGTGGGAAGCCCAGCACGGCGCCGTCGAAGAGGAGCTCGACCCGGCCGAAAAGGAGCTTCGCGCCAAGCTCGCGCAGTA
CCGTGGCGTATGGGTCTTCATCGAACAGTACCAGGGCGAGGCCGCCAAGGTCTCCTGGGAACTCCTCGGCGTGGGTAAGG
AACTCGCCGCAACGCTCGGAGTGAAGCTTTCCGCCCTCATCATCGGCCACGAGGTCGCCCACCTCTGCGAAGAGGCCTTC
GCCTACGGCGCCGATCAGGCCGTCGTCCTGGACGAGAGTGTCTTCAAGGACTACCGCACCAAGCCCTTCACCGACGCCGT
CTGCCACCTGGTCGAAAAGCACAAGCCGGAGGTGATCCTCATGGGGGCCACCGGCCAGGGGCGCGACCTCGCTGGCGCCG
TGGCCACCATTGTCAAGACCGGTCTCACCGCCGACTGCACCGGCCTCGGCATCGACGACAAGCGGAACCTGATGCAGACC
CGCCCCGCCTTCGGCGGCAACATCATGGCCACCATCATGTGCGACCGCTTCCGTCCCCAGATGGCGACGGTCAGGCCCCA
CGTCATGGCCATGCCCGAGCGAAAGGACGGCAGCAAAGGCGTAGTGATCCTCGAGCAGTTCTACCTGCGTGAGCAGGACA
TCCTCGCCAAGGTGATCGAGACCATTAGCGACAAAGGCGGCGCGGACATCGACATCGCCGGAGCCGAGATCATCGTCTCC
GGCGGCCGCGGTCTGATGAACAAGGACAACTTCGCCCTCCTGCACGAGCTGGCAGTCGAACTGGGCGGAGTGGTCGGCGC
CTCCAGAAGCGCCGTCGACGCGGGGTGGATGCCGCACAGCCGTCAGGTAGGGCAGACCGGAAAGACCGTCCGTCCCAAGA
TCTACATAGCCTGCGGCATCTCCGGCGCCATCCAGCACCTGGTCGGGATGCAGGACTCCGACGTAGTCATAGCCATCAAC
AGGGACGCAGAGGCCCCCATCTTCCAGGTGGCCACCTACGGGATAGTGGGAGACCTGTTCCAGGTGCTCCCGGCGCTGAC
GCGCAGGGTCCGCGAAATGAAAGGTGCCCGCGGCGGGTCGGTCCCGGACCGCATCGCCGTTTGA

Upstream 100 bases:

>100_bases
CGGGGACGGCGTGAACGATCCGGAAGGAACCGCGCACTTGCTGCTTGACAAGATGCTGGCCAAAGACCTCTTAGCTCTCT
AGTTCGCCAAGGAGTTCGTG

Downstream 100 bases:

>100_bases
TCTTTTCTCCCCCCCTCCCTTGACGGGAGGGGGCAGGGGGGTGGGTGAAGTAGCCAGCAGCGCAGAAGTGGCATCTGCCC
CCACCCCCTCCCCCCCTCCC

Product: electron transfer flavoprotein subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MQNEKKIKKPRGIARLVAGKCIACGARCESSCPVSGIQMSEAGEPSIVDGKCIGCAKCVKVCAAGALEMFYTPEELELLK
QWEAQHGAVEEELDPAEKELRAKLAQYRGVWVFIEQYQGEAAKVSWELLGVGKELAATLGVKLSALIIGHEVAHLCEEAF
AYGADQAVVLDESVFKDYRTKPFTDAVCHLVEKHKPEVILMGATGQGRDLAGAVATIVKTGLTADCTGLGIDDKRNLMQT
RPAFGGNIMATIMCDRFRPQMATVRPHVMAMPERKDGSKGVVILEQFYLREQDILAKVIETISDKGGADIDIAGAEIIVS
GGRGLMNKDNFALLHELAVELGGVVGASRSAVDAGWMPHSRQVGQTGKTVRPKIYIACGISGAIQHLVGMQDSDVVIAIN
RDAEAPIFQVATYGIVGDLFQVLPALTRRVREMKGARGGSVPDRIAV

Sequences:

>Translated_447_residues
MQNEKKIKKPRGIARLVAGKCIACGARCESSCPVSGIQMSEAGEPSIVDGKCIGCAKCVKVCAAGALEMFYTPEELELLK
QWEAQHGAVEEELDPAEKELRAKLAQYRGVWVFIEQYQGEAAKVSWELLGVGKELAATLGVKLSALIIGHEVAHLCEEAF
AYGADQAVVLDESVFKDYRTKPFTDAVCHLVEKHKPEVILMGATGQGRDLAGAVATIVKTGLTADCTGLGIDDKRNLMQT
RPAFGGNIMATIMCDRFRPQMATVRPHVMAMPERKDGSKGVVILEQFYLREQDILAKVIETISDKGGADIDIAGAEIIVS
GGRGLMNKDNFALLHELAVELGGVVGASRSAVDAGWMPHSRQVGQTGKTVRPKIYIACGISGAIQHLVGMQDSDVVIAIN
RDAEAPIFQVATYGIVGDLFQVLPALTRRVREMKGARGGSVPDRIAV
>Mature_447_residues
MQNEKKIKKPRGIARLVAGKCIACGARCESSCPVSGIQMSEAGEPSIVDGKCIGCAKCVKVCAAGALEMFYTPEELELLK
QWEAQHGAVEEELDPAEKELRAKLAQYRGVWVFIEQYQGEAAKVSWELLGVGKELAATLGVKLSALIIGHEVAHLCEEAF
AYGADQAVVLDESVFKDYRTKPFTDAVCHLVEKHKPEVILMGATGQGRDLAGAVATIVKTGLTADCTGLGIDDKRNLMQT
RPAFGGNIMATIMCDRFRPQMATVRPHVMAMPERKDGSKGVVILEQFYLREQDILAKVIETISDKGGADIDIAGAEIIVS
GGRGLMNKDNFALLHELAVELGGVVGASRSAVDAGWMPHSRQVGQTGKTVRPKIYIACGISGAIQHLVGMQDSDVVIAIN
RDAEAPIFQVATYGIVGDLFQVLPALTRRVREMKGARGGSVPDRIAV

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI4503607, Length=351, Percent_Identity=34.7578347578348, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI189181759, Length=287, Percent_Identity=37.6306620209059, Blast_Score=167, Evalue=2e-41,
Organism=Escherichia coli, GI1787990, Length=331, Percent_Identity=29.3051359516616, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1786226, Length=119, Percent_Identity=47.0588235294118, Blast_Score=113, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17506929, Length=117, Percent_Identity=62.3931623931624, Blast_Score=158, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6325261, Length=211, Percent_Identity=39.8104265402844, Blast_Score=146, Evalue=7e-36,
Organism=Drosophila melanogaster, GI17136898, Length=273, Percent_Identity=39.5604395604396, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24652801, Length=273, Percent_Identity=39.5604395604396, Blast_Score=169, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 48014; Mature: 48014

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00696 ETF_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNEKKIKKPRGIARLVAGKCIACGARCESSCPVSGIQMSEAGEPSIVDGKCIGCAKCVK
CCCCHHHCCCHHHHHHHHCHHHEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHH
VCAAGALEMFYTPEELELLKQWEAQHGAVEEELDPAEKELRAKLAQYRGVWVFIEQYQGE
HHHCCHHHHEECCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCEEEEEEECCCC
AAKVSWELLGVGKELAATLGVKLSALIIGHEVAHLCEEAFAYGADQAVVLDESVFKDYRT
HHEEEEHEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHCC
KPFTDAVCHLVEKHKPEVILMGATGQGRDLAGAVATIVKTGLTADCTGLGIDDKRNLMQT
CCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHC
RPAFGGNIMATIMCDRFRPQMATVRPHVMAMPERKDGSKGVVILEQFYLREQDILAKVIE
CCCCCCCEEEEEEHHHCCCCHHHCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
TISDKGGADIDIAGAEIIVSGGRGLMNKDNFALLHELAVELGGVVGASRSAVDAGWMPHS
HHHCCCCCEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
RQVGQTGKTVRPKIYIACGISGAIQHLVGMQDSDVVIAINRDAEAPIFQVATYGIVGDLF
CCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
QVLPALTRRVREMKGARGGSVPDRIAV
HHHHHHHHHHHHHHCCCCCCCCHHCCC
>Mature Secondary Structure
MQNEKKIKKPRGIARLVAGKCIACGARCESSCPVSGIQMSEAGEPSIVDGKCIGCAKCVK
CCCCHHHCCCHHHHHHHHCHHHEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHH
VCAAGALEMFYTPEELELLKQWEAQHGAVEEELDPAEKELRAKLAQYRGVWVFIEQYQGE
HHHCCHHHHEECCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCEEEEEEECCCC
AAKVSWELLGVGKELAATLGVKLSALIIGHEVAHLCEEAFAYGADQAVVLDESVFKDYRT
HHEEEEHEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHCC
KPFTDAVCHLVEKHKPEVILMGATGQGRDLAGAVATIVKTGLTADCTGLGIDDKRNLMQT
CCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHC
RPAFGGNIMATIMCDRFRPQMATVRPHVMAMPERKDGSKGVVILEQFYLREQDILAKVIE
CCCCCCCEEEEEEHHHCCCCHHHCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
TISDKGGADIDIAGAEIIVSGGRGLMNKDNFALLHELAVELGGVVGASRSAVDAGWMPHS
HHHCCCCCEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
RQVGQTGKTVRPKIYIACGISGAIQHLVGMQDSDVVIAINRDAEAPIFQVATYGIVGDLF
CCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
QVLPALTRRVREMKGARGGSVPDRIAV
HHHHHHHHHHHHHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1850088 [H]