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The map label for this gene is fadF [H]

Identifier: 197117855

GI number: 197117855

Start: 1699702

End: 1701672

Strand: Direct

Name: fadF [H]

Synonym: Gbem_1468

Alternate gene names: 197117855

Gene position: 1699702-1701672 (Clockwise)

Preceding gene: 197117854

Following gene: 197117856

Centisome position: 36.83

GC content: 63.37

Gene sequence:

>1971_bases
ATGCCAAGCACTCAAATCTATTTCATGCCGCTTTTCATCATCGCCCTCGTGGCCTTTTGCTTCAGCTGCTACCAGCGCCT
GCAACTGGTCGCCGTCGGCACCTCCGAGGACCGTTTCGACCGGCCCGGCGAGCGGCTGGCCGGCATGTTCCGGTACGCCT
TCGGTCAAGAGAGGGTCCTCGCTAGACCCTACGGCCTGAATCACTTCGCGCTCTTCTGGGCCTTCATGCTGCTCCTGGTC
GCGAACGTCTCCTTCCTGGCCGAAGGGCTCTTCCCCGGGTTCACCCTCTCGGCGCTCCCGGCCCCCCTGCACCACGCCCT
GGGACTCGCCTTCGACCTGGTCTCGGTGGTTGCGCTCGTCAGCGTCGCGGTAGCGCTCACTCGCCGGCTTTTCTTCGCGC
CGTCCTACCTCGGTAACGATTACACCAAGGCCTGCAGCGGCGAGGCGCTCCTGATCCTCGCCTTGATCGCCACCCTGATG
GTCGCCTTCTTCCTGCTGAACGCGGCGCAAATCGCTCTCGGCGCGGAGCAGACCTTGAGGCCCGTCTCCGGTGCGCTAGC
GACTCTTTTGCGGGGGATGCCGCAAGCCTCGCTCGAAGCTATCGCCTCCGCCTCTTGGTGGGTGCATGCCGTGGTGCTCC
TGCTGTTCATGAACCTTTTGCCCCGCAGCAAGCACATGCACATACTCACCGCCATCCCCAACTGCTACTTCCGCAACCTG
GAGAAGCCCAACGTGCAGCCGCGCGAGAGCTTCGAACTCGGCAAGCGCTTCGGCGTGAGCGAGGTGGCGCAGTTCTCCTG
GAAGGATCTGCTGGATTCCTTCTCCTGCACCGAATGCGGGCGCTGCCAGGACCTCTGCCCGGCCCACAACACCGGGAAGC
CTTTGAACCCGCGCCGGATCATCCACGACATCAAGGTGAACCTCTTGGAGAACGGCGTCGCCAATGCCGGAAAGCAGCAG
CTCCCGCTCATCGGCGAGAAGGCTGAGGGGACCAGCTGCGAGGACGCCCTTTGGTCCTGCACCACCTGCGGCGCCTGCCT
GTCGGTCTGCCCGGTCCTCATCGAGCATATGCCCAAGATCGTCAAGATGCGTCGCCATCTGGTCCAGGAAAAGGCCAGGT
TCCCGGAAGAGCTTTTGAACCTTTTCGAGAACATGGAGCAGCGTTCCAACCCCTGGGGCATCGCCCCCTCCGAGCGCGGC
AAATGGGCGACCCTCCTGGGGGACAGGGAGTTCACGGCAGGCAAGACCGAATACCTCTTCTTCGTAGGGTGCGCCGGTTC
CTTTGACAGCCGCGCCAAGCAGACCACCGTGGCCCTCGCCACCGTGCTCGACAAGGCAGGCGTCACCTGGGGCATCCTCG
GCAGGGAAGAGCTCTGCTGCGGCGACAGCGTGAGGCGCCTGGGTAACGAATTCGTCTTCGACCGCATGGCGCGGGAGAAC
GTGGCCAAGTTCAAGGAGAAAGGGGTCACCAAGATCGTCACCCAGTGCCCGCACTGCTTCAGCACGCTCAAGAACGACTA
CCGTCAGTACGGTCTGGAGCTGGAGGTGCTGCACCACAGCGAGCTGATCGCAAGGCTCGTGCAGGAGGGGAAACTCCCCG
CCGCCAAAGGTGTCAACCTGGGCAAGACCCTCTTCCACGACTCCTGCTACCTGGGGCGCCACAACGACACCTTCGACGCA
CCCCGCCAGGTGATCGAGGCAGCGACCGGTGCCGCTCCCGGGGAGTTCGAGCGCCAGAAAGAGAACGGGTTCTGCTGCGG
TGCCGGCGGCGGGCGCATGTGGATGGAAGAGCAGATCGGCACGAGAATCAACCACGACCGCGTCAACGAGGCCCTGAAGC
AGCAGCCCGACACCATCTGCGTCAGCTGTCCCTACTGCATGACCATGCTGGAGGACGGACTTAAGGACCAGGGCGCGGAA
AAGGTGAGGGTAAAAGACATCGCAGAGGTAATGGCCGAGGCAATCAACTAG

Upstream 100 bases:

>100_bases
GGTGGGTGAAGTAGCCAGCAGCGCAGAAGTGGCATCTGCCCCCACCCCCTCCCCCCCTCCCGCGAGGGGAGGGGGGACTT
TACGAGATTCCGAGGTAGTC

Downstream 100 bases:

>100_bases
ATAGGAGGCAAAAATGAAAGTTCTAGTCTGCATCAAACAGGTACCGGATATGGAATCCCGTTTCAAGGTCAACGGGAGCG
GCGATTGGTACGACGAAGCC

Product: iron-sulfur cluster-binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 656; Mature: 655

Protein sequence:

>656_residues
MPSTQIYFMPLFIIALVAFCFSCYQRLQLVAVGTSEDRFDRPGERLAGMFRYAFGQERVLARPYGLNHFALFWAFMLLLV
ANVSFLAEGLFPGFTLSALPAPLHHALGLAFDLVSVVALVSVAVALTRRLFFAPSYLGNDYTKACSGEALLILALIATLM
VAFFLLNAAQIALGAEQTLRPVSGALATLLRGMPQASLEAIASASWWVHAVVLLLFMNLLPRSKHMHILTAIPNCYFRNL
EKPNVQPRESFELGKRFGVSEVAQFSWKDLLDSFSCTECGRCQDLCPAHNTGKPLNPRRIIHDIKVNLLENGVANAGKQQ
LPLIGEKAEGTSCEDALWSCTTCGACLSVCPVLIEHMPKIVKMRRHLVQEKARFPEELLNLFENMEQRSNPWGIAPSERG
KWATLLGDREFTAGKTEYLFFVGCAGSFDSRAKQTTVALATVLDKAGVTWGILGREELCCGDSVRRLGNEFVFDRMAREN
VAKFKEKGVTKIVTQCPHCFSTLKNDYRQYGLELEVLHHSELIARLVQEGKLPAAKGVNLGKTLFHDSCYLGRHNDTFDA
PRQVIEAATGAAPGEFERQKENGFCCGAGGGRMWMEEQIGTRINHDRVNEALKQQPDTICVSCPYCMTMLEDGLKDQGAE
KVRVKDIAEVMAEAIN

Sequences:

>Translated_656_residues
MPSTQIYFMPLFIIALVAFCFSCYQRLQLVAVGTSEDRFDRPGERLAGMFRYAFGQERVLARPYGLNHFALFWAFMLLLV
ANVSFLAEGLFPGFTLSALPAPLHHALGLAFDLVSVVALVSVAVALTRRLFFAPSYLGNDYTKACSGEALLILALIATLM
VAFFLLNAAQIALGAEQTLRPVSGALATLLRGMPQASLEAIASASWWVHAVVLLLFMNLLPRSKHMHILTAIPNCYFRNL
EKPNVQPRESFELGKRFGVSEVAQFSWKDLLDSFSCTECGRCQDLCPAHNTGKPLNPRRIIHDIKVNLLENGVANAGKQQ
LPLIGEKAEGTSCEDALWSCTTCGACLSVCPVLIEHMPKIVKMRRHLVQEKARFPEELLNLFENMEQRSNPWGIAPSERG
KWATLLGDREFTAGKTEYLFFVGCAGSFDSRAKQTTVALATVLDKAGVTWGILGREELCCGDSVRRLGNEFVFDRMAREN
VAKFKEKGVTKIVTQCPHCFSTLKNDYRQYGLELEVLHHSELIARLVQEGKLPAAKGVNLGKTLFHDSCYLGRHNDTFDA
PRQVIEAATGAAPGEFERQKENGFCCGAGGGRMWMEEQIGTRINHDRVNEALKQQPDTICVSCPYCMTMLEDGLKDQGAE
KVRVKDIAEVMAEAIN
>Mature_655_residues
PSTQIYFMPLFIIALVAFCFSCYQRLQLVAVGTSEDRFDRPGERLAGMFRYAFGQERVLARPYGLNHFALFWAFMLLLVA
NVSFLAEGLFPGFTLSALPAPLHHALGLAFDLVSVVALVSVAVALTRRLFFAPSYLGNDYTKACSGEALLILALIATLMV
AFFLLNAAQIALGAEQTLRPVSGALATLLRGMPQASLEAIASASWWVHAVVLLLFMNLLPRSKHMHILTAIPNCYFRNLE
KPNVQPRESFELGKRFGVSEVAQFSWKDLLDSFSCTECGRCQDLCPAHNTGKPLNPRRIIHDIKVNLLENGVANAGKQQL
PLIGEKAEGTSCEDALWSCTTCGACLSVCPVLIEHMPKIVKMRRHLVQEKARFPEELLNLFENMEQRSNPWGIAPSERGK
WATLLGDREFTAGKTEYLFFVGCAGSFDSRAKQTTVALATVLDKAGVTWGILGREELCCGDSVRRLGNEFVFDRMARENV
AKFKEKGVTKIVTQCPHCFSTLKNDYRQYGLELEVLHHSELIARLVQEGKLPAAKGVNLGKTLFHDSCYLGRHNDTFDAP
RQVIEAATGAAPGEFERQKENGFCCGAGGGRMWMEEQIGTRINHDRVNEALKQQPDTICVSCPYCMTMLEDGLKDQGAEK
VRVKDIAEVMAEAIN

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 72689; Mature: 72558

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTQIYFMPLFIIALVAFCFSCYQRLQLVAVGTSEDRFDRPGERLAGMFRYAFGQERVL
CCCCEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHE
ARPYGLNHFALFWAFMLLLVANVSFLAEGLFPGFTLSALPAPLHHALGLAFDLVSVVALV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHH
SVAVALTRRLFFAPSYLGNDYTKACSGEALLILALIATLMVAFFLLNAAQIALGAEQTLR
HHHHHHHHHHHHCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
PVSGALATLLRGMPQASLEAIASASWWVHAVVLLLFMNLLPRSKHMHILTAIPNCYFRNL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHCCHHHHHCC
EKPNVQPRESFELGKRFGVSEVAQFSWKDLLDSFSCTECGRCQDLCPAHNTGKPLNPRRI
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCHHHH
IHDIKVNLLENGVANAGKQQLPLIGEKAEGTSCEDALWSCTTCGACLSVCPVLIEHMPKI
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKMRRHLVQEKARFPEELLNLFENMEQRSNPWGIAPSERGKWATLLGDREFTAGKTEYLF
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEE
FVGCAGSFDSRAKQTTVALATVLDKAGVTWGILGREELCCGDSVRRLGNEFVFDRMAREN
EEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHH
VAKFKEKGVTKIVTQCPHCFSTLKNDYRQYGLELEVLHHSELIARLVQEGKLPAAKGVNL
HHHHHHCCHHHHHHHCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCCCCCCC
GKTLFHDSCYLGRHNDTFDAPRQVIEAATGAAPGEFERQKENGFCCGAGGGRMWMEEQIG
CHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCEEEECCCCCCHHHHHHC
TRINHDRVNEALKQQPDTICVSCPYCMTMLEDGLKDQGAEKVRVKDIAEVMAEAIN
CCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PSTQIYFMPLFIIALVAFCFSCYQRLQLVAVGTSEDRFDRPGERLAGMFRYAFGQERVL
CCCEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHE
ARPYGLNHFALFWAFMLLLVANVSFLAEGLFPGFTLSALPAPLHHALGLAFDLVSVVALV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHH
SVAVALTRRLFFAPSYLGNDYTKACSGEALLILALIATLMVAFFLLNAAQIALGAEQTLR
HHHHHHHHHHHHCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
PVSGALATLLRGMPQASLEAIASASWWVHAVVLLLFMNLLPRSKHMHILTAIPNCYFRNL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHCCHHHHHCC
EKPNVQPRESFELGKRFGVSEVAQFSWKDLLDSFSCTECGRCQDLCPAHNTGKPLNPRRI
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCHHHH
IHDIKVNLLENGVANAGKQQLPLIGEKAEGTSCEDALWSCTTCGACLSVCPVLIEHMPKI
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKMRRHLVQEKARFPEELLNLFENMEQRSNPWGIAPSERGKWATLLGDREFTAGKTEYLF
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEE
FVGCAGSFDSRAKQTTVALATVLDKAGVTWGILGREELCCGDSVRRLGNEFVFDRMAREN
EEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHH
VAKFKEKGVTKIVTQCPHCFSTLKNDYRQYGLELEVLHHSELIARLVQEGKLPAAKGVNL
HHHHHHCCHHHHHHHCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCCCCCCC
GKTLFHDSCYLGRHNDTFDAPRQVIEAATGAAPGEFERQKENGFCCGAGGGRMWMEEQIG
CHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCEEEECCCCCCHHHHHHC
TRINHDRVNEALKQQPDTICVSCPYCMTMLEDGLKDQGAEKVRVKDIAEVMAEAIN
CCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]