Click here to switch to the map view.

The map label for this gene is etfB-2 [H]

Identifier: 197117853

GI number: 197117853

Start: 1697388

End: 1698200

Strand: Direct

Name: etfB-2 [H]

Synonym: Gbem_1466

Alternate gene names: 197117853

Gene position: 1697388-1698200 (Clockwise)

Preceding gene: 197117852

Following gene: 197117854

Centisome position: 36.78

GC content: 63.84

Gene sequence:

>813_bases
ATGCTTGTGATCTCCTGCATCAAACAAGTGCCAGACACCACCCAGGTGAAGATCGACCCGGTCACCAACACCCTGGTCCG
GGAAGGTATCCCCTTCATCGTCAACCCCTACGACACCCACGCCCTCGAAGAGGGGCTGGCGCTCAAAGATCGCTTCGGCC
TCAAGGCCATCGCCATCTCCATGGGCCCCCCCAACACCGAGGCGACCCTCAAGAAGGCGTGCGCGCTGGGTGTGGACCAG
GCCATCCTCCTCTCCGACCGGGCCTTTGGCGGCGCCGACACGCTGGCCACGAGCCAGGTCTTGGCCTCAGCCATCGAGCG
CCTGGGGCGGGAGGAAGAAGTTGGCATCGTTTTTTGCGGCAAGCAGACCATCGACGGCGACACCGCCCAAGTAGGCCCCG
GCATCGCCACCCGCCTTGGCTTCACCCAGCTCACCCTGGTTGACCGCATCGAGTGGCTGGATGTTCCCAACAAGCGTATA
CGGGTCAGGCGCAAGCTGGAAGGAAGGCACGAGATCGTGGAGGCGCCCCTCCCGGTTGTGATCACCGCGGTGCGCGAGCT
GAACCGCCCCCGCTACCCAACAGTACCGATGCGCCTTTCCGCCCAGGAAACGCCGGTCGCGCTCTGGGACAACCAGGTGC
TGCAACTCGACGTGGAGACGGTAGGCCTCAAGGGGTCCGCCACCTGGGTCAGCAAGATCTTCTCACCCGAGCGCGACCAG
GGGGAGATCATCGGGGACGGCGTGAACGATCCGGAAGGAACCGCGCACTTGCTGCTTGACAAGATGCTGGCCAAAGACCT
CTTAGCTCTCTAG

Upstream 100 bases:

>100_bases
GAGTGGGAGGGGCCTAACGTCCCCCCCTTTGCGAAGGGGGGACAGGGGGGATTTGGGGTATGAAAAAACAAGATTCGAAG
TCCAACCGAAGGAGAAGGTC

Downstream 100 bases:

>100_bases
TTCGCCAAGGAGTTCGTGATGCAAAACGAGAAGAAGATCAAGAAACCACGCGGCATAGCACGGCTGGTAGCCGGCAAGTG
CATAGCCTGCGGAGCCCGGT

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLVISCIKQVPDTTQVKIDPVTNTLVREGIPFIVNPYDTHALEEGLALKDRFGLKAIAISMGPPNTEATLKKACALGVDQ
AILLSDRAFGGADTLATSQVLASAIERLGREEEVGIVFCGKQTIDGDTAQVGPGIATRLGFTQLTLVDRIEWLDVPNKRI
RVRRKLEGRHEIVEAPLPVVITAVRELNRPRYPTVPMRLSAQETPVALWDNQVLQLDVETVGLKGSATWVSKIFSPERDQ
GEIIGDGVNDPEGTAHLLLDKMLAKDLLAL

Sequences:

>Translated_270_residues
MLVISCIKQVPDTTQVKIDPVTNTLVREGIPFIVNPYDTHALEEGLALKDRFGLKAIAISMGPPNTEATLKKACALGVDQ
AILLSDRAFGGADTLATSQVLASAIERLGREEEVGIVFCGKQTIDGDTAQVGPGIATRLGFTQLTLVDRIEWLDVPNKRI
RVRRKLEGRHEIVEAPLPVVITAVRELNRPRYPTVPMRLSAQETPVALWDNQVLQLDVETVGLKGSATWVSKIFSPERDQ
GEIIGDGVNDPEGTAHLLLDKMLAKDLLAL
>Mature_270_residues
MLVISCIKQVPDTTQVKIDPVTNTLVREGIPFIVNPYDTHALEEGLALKDRFGLKAIAISMGPPNTEATLKKACALGVDQ
AILLSDRAFGGADTLATSQVLASAIERLGREEEVGIVFCGKQTIDGDTAQVGPGIATRLGFTQLTLVDRIEWLDVPNKRI
RVRRKLEGRHEIVEAPLPVVITAVRELNRPRYPTVPMRLSAQETPVALWDNQVLQLDVETVGLKGSATWVSKIFSPERDQ
GEIIGDGVNDPEGTAHLLLDKMLAKDLLAL

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=206, Percent_Identity=31.0679611650485, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI62420877, Length=193, Percent_Identity=31.6062176165803, Blast_Score=91, Evalue=1e-18,
Organism=Escherichia coli, GI87081682, Length=254, Percent_Identity=26.3779527559055, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI2367123, Length=258, Percent_Identity=24.4186046511628, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=210, Percent_Identity=29.5238095238095, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6321646, Length=185, Percent_Identity=31.8918918918919, Blast_Score=100, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24651147, Length=198, Percent_Identity=29.7979797979798, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24651145, Length=198, Percent_Identity=29.7979797979798, Blast_Score=87, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 29399; Mature: 29399

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVISCIKQVPDTTQVKIDPVTNTLVREGIPFIVNPYDTHALEEGLALKDRFGLKAIAIS
CCEEHHHHHCCCCCEEEECCHHHHHHHCCCCEEECCCHHHHHHCCCCHHHHCCCEEEEEE
MGPPNTEATLKKACALGVDQAILLSDRAFGGADTLATSQVLASAIERLGREEEVGIVFCG
CCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
KQTIDGDTAQVGPGIATRLGFTQLTLVDRIEWLDVPNKRIRVRRKLEGRHEIVEAPLPVV
CCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCHHHH
ITAVRELNRPRYPTVPMRLSAQETPVALWDNQVLQLDVETVGLKGSATWVSKIFSPERDQ
HHHHHHHCCCCCCCCCEEECCCCCCEEEECCEEEEEEEEEECCCCCHHHHHHHCCCCCCC
GEIIGDGVNDPEGTAHLLLDKMLAKDLLAL
CCEEECCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVISCIKQVPDTTQVKIDPVTNTLVREGIPFIVNPYDTHALEEGLALKDRFGLKAIAIS
CCEEHHHHHCCCCCEEEECCHHHHHHHCCCCEEECCCHHHHHHCCCCHHHHCCCEEEEEE
MGPPNTEATLKKACALGVDQAILLSDRAFGGADTLATSQVLASAIERLGREEEVGIVFCG
CCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
KQTIDGDTAQVGPGIATRLGFTQLTLVDRIEWLDVPNKRIRVRRKLEGRHEIVEAPLPVV
CCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCHHHH
ITAVRELNRPRYPTVPMRLSAQETPVALWDNQVLQLDVETVGLKGSATWVSKIFSPERDQ
HHHHHHHCCCCCCCCCEEECCCCCCEEEECCEEEEEEEEEECCCCCHHHHHHHCCCCCCC
GEIIGDGVNDPEGTAHLLLDKMLAKDLLAL
CCEEECCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA