Click here to switch to the map view.

The map label for this gene is fadF [H]

Identifier: 197117850

GI number: 197117850

Start: 1692721

End: 1694709

Strand: Direct

Name: fadF [H]

Synonym: Gbem_1463

Alternate gene names: 197117850

Gene position: 1692721-1694709 (Clockwise)

Preceding gene: 197117849

Following gene: 197117851

Centisome position: 36.68

GC content: 64.25

Gene sequence:

>1989_bases
ATGGAAGCTACGCGCGAACTTTATTGGAACATAGGCCACGGGGCGGCGGTGCTGGTCCCGATGTACGTGGTCACCTTCGC
GGCCCTGGGGCTGCTCGCCTACTACGGCTACCAGCGGCTCGCCATCTACCGGCAGGGTAAGCCCGTGAACAGGACCGACA
ACCGCGCCGAGCGTGTGAAGATGCTCCTGCAAAACGTCCTGCTGCAGAGCAAGGTGCTCAAGGTCAAAGCCCCCGGCTTT
GCCCACGGCTTCTTCTTCTGGTCCTTCGCCGTCCTCTTCGTCGGGACCGCCCTGGTGGCGCTGCAGGCTGACGGCACCGA
CCTTCTCTTCCACGTCCGCTTCCTCACCGGCAGCTTCTACAAGATCTTCTCGCTGGCCCTTGACCTGGCTGGCCTTGCCG
CCACCTTGATGCTGGCCGGGTTCGCGGTGCGCCGCTACCTGGTGCGCCCGGCGGGCCTTGAGAGCAGCCGCGACGACGCC
ATCATGCACGGCCTTCTCTTCGCCATCCTCATCACCGGCTTTCTCATCGAGGGTGCGCGCATGGCGGTTACCGAGCTGGT
CTACCAGCCCGAGCTTGCCTACTGGTCCCCGGTGGGGCTATTGGTGGCGAACGCGCTTTCGGGGCTTGGCGATCAAGCTC
TCCGCTCGCTGCACGCGGGGCTTTGGTGGCTGCATTTCGCCCTCGTCGCCGGCTTCATCTGTTCCATCCCCTTCACCAAG
TTCCGCCACATCTTCACCACCTCGGCCAACTATTTCCTGGCGCCGCTCGGCCCCAAGGGTGCGCTGGTGACGCTGGACAT
GGAAGGGGACGCCGAGAGCTTCGGCGCCGCCAAGCTCGGGGACCTCACCTGGAAAGACATCTTCGACACCGACGCCTGCA
CCAAGTGCAAGCGCTGCCAGGACCGCTGTCCCGCCCACGGCACCGACAAGCCGCTCTCGCCGATGAAGATCATCGACCAG
GTGGGCGAGATCGCGCGCGGACAAGCCGAGGACAACCTGGTCGAGACGCTGGGAAAAGACGCCGTCTGGTCCTGCACCAC
CTGCCGCGCCTGCCAGGAGATCTGCCCGGCCGCGGTGGAGCATGTCAACAAGGTGGTTGACGTCCGGCGCAACCTGGTCC
TCATGGAAGGTGAATTCCCCGGTGAAGAGGTGACCACCGCCATGGGCAACGTCGAGGTCAACGGCAATCCCCTGGGGCTC
GCCTTCGCCTCCCGCGGCGACTGGGCGCAGGACCTGCCGGTCACGCTCATGTCCGACTGCGCCGACGTCGACATACTCTA
TTTCGTCGGCTGCTACGCCTCCTTCGACAAACGGAACATCAAGGTCGCCACCGCCTTCGTCAAGCTCTGCGCCGCCGCCG
GCATCAAGGTCGGCATCCTGGGCAAGGAAGAGAAGTGCTGCGGTGAGCCTATGCGGAAGATGGGCAACGAGTACCTCTAC
CAGACCCTCGCCGCCGAGAACATCGCCATGATCAAGGAGTACGGGGTGAAGAAGGTCGTCACCGCCTGCCCGCACTGCTT
CAACACGCTGGCCAAGGATTACCGTGACCTGGGCTTCGACGTCGAGACCGAGCACTACACCACCTTCCTCAACCGTCTCC
TCAAGGAAGGAAGTCTCAAGGTGACCCCGGGCGCCTTCGAATGCACCTACCATGACTCCTGCTACTTGGGGCGCTACAAC
GACACCTACGAGGCACCCCGCGAGCTGGTTCAGGCGGCCGGGGGCACCATCCGCGAGATGGATAGAAGCCAGGCGGAAAG
CTTCTGCTGCGGAGCCGGCGGCGGCCGCATCATGGCCGAGGAAAAGCTCGGAAGCCGCATCAGCGTCAAGCGTTCCCAGA
TGGCCTCGGCGACCGGCGCCGGCATGCTGGTCTCCAACTGCCCCTTCTGCCTCACCATGTTCGAGGACGGCATCAAGGGA
GCGGAGCTGGAAGGGCTGCTGGTCCCGAGAGACATCGCCGAGATCCTGGTGGAAAAGGTAGTCGCGTAG

Upstream 100 bases:

>100_bases
TGGCCGAAGGCCGGGTGAGGGAGATGCCACGAAGAGATCCGACAGATTTTGACGCATCGGGCTTCCCTTAGCGGCTTTGC
CCAGACACAAGGAGTAGATC

Downstream 100 bases:

>100_bases
CAAAAGCGGAACTGCGGGGGCTGGTTCACAAAGGCAAATCCCCCCCGCAAAGGGGGAAGTTGAAAAGGTTCCATGGTGTC
CACCGGGTCCACCGCAAAGA

Product: iron-sulfur cluster-binding oxidoreductase

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MEATRELYWNIGHGAAVLVPMYVVTFAALGLLAYYGYQRLAIYRQGKPVNRTDNRAERVKMLLQNVLLQSKVLKVKAPGF
AHGFFFWSFAVLFVGTALVALQADGTDLLFHVRFLTGSFYKIFSLALDLAGLAATLMLAGFAVRRYLVRPAGLESSRDDA
IMHGLLFAILITGFLIEGARMAVTELVYQPELAYWSPVGLLVANALSGLGDQALRSLHAGLWWLHFALVAGFICSIPFTK
FRHIFTTSANYFLAPLGPKGALVTLDMEGDAESFGAAKLGDLTWKDIFDTDACTKCKRCQDRCPAHGTDKPLSPMKIIDQ
VGEIARGQAEDNLVETLGKDAVWSCTTCRACQEICPAAVEHVNKVVDVRRNLVLMEGEFPGEEVTTAMGNVEVNGNPLGL
AFASRGDWAQDLPVTLMSDCADVDILYFVGCYASFDKRNIKVATAFVKLCAAAGIKVGILGKEEKCCGEPMRKMGNEYLY
QTLAAENIAMIKEYGVKKVVTACPHCFNTLAKDYRDLGFDVETEHYTTFLNRLLKEGSLKVTPGAFECTYHDSCYLGRYN
DTYEAPRELVQAAGGTIREMDRSQAESFCCGAGGGRIMAEEKLGSRISVKRSQMASATGAGMLVSNCPFCLTMFEDGIKG
AELEGLLVPRDIAEILVEKVVA

Sequences:

>Translated_662_residues
MEATRELYWNIGHGAAVLVPMYVVTFAALGLLAYYGYQRLAIYRQGKPVNRTDNRAERVKMLLQNVLLQSKVLKVKAPGF
AHGFFFWSFAVLFVGTALVALQADGTDLLFHVRFLTGSFYKIFSLALDLAGLAATLMLAGFAVRRYLVRPAGLESSRDDA
IMHGLLFAILITGFLIEGARMAVTELVYQPELAYWSPVGLLVANALSGLGDQALRSLHAGLWWLHFALVAGFICSIPFTK
FRHIFTTSANYFLAPLGPKGALVTLDMEGDAESFGAAKLGDLTWKDIFDTDACTKCKRCQDRCPAHGTDKPLSPMKIIDQ
VGEIARGQAEDNLVETLGKDAVWSCTTCRACQEICPAAVEHVNKVVDVRRNLVLMEGEFPGEEVTTAMGNVEVNGNPLGL
AFASRGDWAQDLPVTLMSDCADVDILYFVGCYASFDKRNIKVATAFVKLCAAAGIKVGILGKEEKCCGEPMRKMGNEYLY
QTLAAENIAMIKEYGVKKVVTACPHCFNTLAKDYRDLGFDVETEHYTTFLNRLLKEGSLKVTPGAFECTYHDSCYLGRYN
DTYEAPRELVQAAGGTIREMDRSQAESFCCGAGGGRIMAEEKLGSRISVKRSQMASATGAGMLVSNCPFCLTMFEDGIKG
AELEGLLVPRDIAEILVEKVVA
>Mature_662_residues
MEATRELYWNIGHGAAVLVPMYVVTFAALGLLAYYGYQRLAIYRQGKPVNRTDNRAERVKMLLQNVLLQSKVLKVKAPGF
AHGFFFWSFAVLFVGTALVALQADGTDLLFHVRFLTGSFYKIFSLALDLAGLAATLMLAGFAVRRYLVRPAGLESSRDDA
IMHGLLFAILITGFLIEGARMAVTELVYQPELAYWSPVGLLVANALSGLGDQALRSLHAGLWWLHFALVAGFICSIPFTK
FRHIFTTSANYFLAPLGPKGALVTLDMEGDAESFGAAKLGDLTWKDIFDTDACTKCKRCQDRCPAHGTDKPLSPMKIIDQ
VGEIARGQAEDNLVETLGKDAVWSCTTCRACQEICPAAVEHVNKVVDVRRNLVLMEGEFPGEEVTTAMGNVEVNGNPLGL
AFASRGDWAQDLPVTLMSDCADVDILYFVGCYASFDKRNIKVATAFVKLCAAAGIKVGILGKEEKCCGEPMRKMGNEYLY
QTLAAENIAMIKEYGVKKVVTACPHCFNTLAKDYRDLGFDVETEHYTTFLNRLLKEGSLKVTPGAFECTYHDSCYLGRYN
DTYEAPRELVQAAGGTIREMDRSQAESFCCGAGGGRIMAEEKLGSRISVKRSQMASATGAGMLVSNCPFCLTMFEDGIKG
AELEGLLVPRDIAEILVEKVVA

Specific function: Electron Transfer Protein; May Also Function As The Membrane Anchor For The Glpab Dimer. [C]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 72410; Mature: 72410

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATRELYWNIGHGAAVLVPMYVVTFAALGLLAYYGYQRLAIYRQGKPVNRTDNRAERVK
CCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCHHHHHH
MLLQNVLLQSKVLKVKAPGFAHGFFFWSFAVLFVGTALVALQADGTDLLFHVRFLTGSFY
HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHH
KIFSLALDLAGLAATLMLAGFAVRRYLVRPAGLESSRDDAIMHGLLFAILITGFLIEGAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
MAVTELVYQPELAYWSPVGLLVANALSGLGDQALRSLHAGLWWLHFALVAGFICSIPFTK
HHHHHHHHCCCCCHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FRHIFTTSANYFLAPLGPKGALVTLDMEGDAESFGAAKLGDLTWKDIFDTDACTKCKRCQ
HHHHHCCCCCEEEEECCCCCCEEEEEECCCCHHCCCCHHCCCCHHHHCCCHHHHHHHHHH
DRCPAHGTDKPLSPMKIIDQVGEIARGQAEDNLVETLGKDAVWSCTTCRACQEICPAAVE
HHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
HVNKVVDVRRNLVLMEGEFPGEEVTTAMGNVEVNGNPLGLAFASRGDWAQDLPVTLMSDC
HHHHHHHHHHCEEEEECCCCCHHHHHHHCCEEECCCEEEEEEECCCCCCCCCCHHHHHCC
ADVDILYFVGCYASFDKRNIKVATAFVKLCAAAGIKVGILGKEEKCCGEPMRKMGNEYLY
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH
QTLAAENIAMIKEYGVKKVVTACPHCFNTLAKDYRDLGFDVETEHYTTFLNRLLKEGSLK
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEE
VTPGAFECTYHDSCYLGRYNDTYEAPRELVQAAGGTIREMDRSQAESFCCGAGGGRIMAE
ECCCCEEEEECCCEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCEECCCCCCEEEH
EKLGSRISVKRSQMASATGAGMLVSNCPFCLTMFEDGIKGAELEGLLVPRDIAEILVEKV
HHCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHH
VA
CC
>Mature Secondary Structure
MEATRELYWNIGHGAAVLVPMYVVTFAALGLLAYYGYQRLAIYRQGKPVNRTDNRAERVK
CCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCHHHHHH
MLLQNVLLQSKVLKVKAPGFAHGFFFWSFAVLFVGTALVALQADGTDLLFHVRFLTGSFY
HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHH
KIFSLALDLAGLAATLMLAGFAVRRYLVRPAGLESSRDDAIMHGLLFAILITGFLIEGAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
MAVTELVYQPELAYWSPVGLLVANALSGLGDQALRSLHAGLWWLHFALVAGFICSIPFTK
HHHHHHHHCCCCCHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FRHIFTTSANYFLAPLGPKGALVTLDMEGDAESFGAAKLGDLTWKDIFDTDACTKCKRCQ
HHHHHCCCCCEEEEECCCCCCEEEEEECCCCHHCCCCHHCCCCHHHHCCCHHHHHHHHHH
DRCPAHGTDKPLSPMKIIDQVGEIARGQAEDNLVETLGKDAVWSCTTCRACQEICPAAVE
HHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
HVNKVVDVRRNLVLMEGEFPGEEVTTAMGNVEVNGNPLGLAFASRGDWAQDLPVTLMSDC
HHHHHHHHHHCEEEEECCCCCHHHHHHHCCEEECCCEEEEEEECCCCCCCCCCHHHHHCC
ADVDILYFVGCYASFDKRNIKVATAFVKLCAAAGIKVGILGKEEKCCGEPMRKMGNEYLY
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH
QTLAAENIAMIKEYGVKKVVTACPHCFNTLAKDYRDLGFDVETEHYTTFLNRLLKEGSLK
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEE
VTPGAFECTYHDSCYLGRYNDTYEAPRELVQAAGGTIREMDRSQAESFCCGAGGGRIMAE
ECCCCEEEEECCCEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCEECCCCCCEEEH
EKLGSRISVKRSQMASATGAGMLVSNCPFCLTMFEDGIKGAELEGLLVPRDIAEILVEKV
HHCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHH
VA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]