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The map label for this gene is ybgC [C]

Identifier: 197117829

GI number: 197117829

Start: 1665480

End: 1665938

Strand: Direct

Name: ybgC [C]

Synonym: Gbem_1442

Alternate gene names: 197117829

Gene position: 1665480-1665938 (Clockwise)

Preceding gene: 197117826

Following gene: 197117830

Centisome position: 36.09

GC content: 61.44

Gene sequence:

>459_bases
ATGGAACAGTTTCGATACTATCTCAGGGTCCGCTACTACGAATGCGACATGCAGAAGGTGGTCTACAACGCCAACTACGC
CAACTACGCGGGCGTGGCTACCATCGAATTCCTGAGGGCGCTCGCGGGGCCGGGCCTTTTGCAGGGGGACCTCGATTTCA
TGGTGGTGAGCCAGAACATGGAATGGAGGGCACCGGCGCGTTTCGACGAGGTCCTGGAGATATCGGTGGCGGTTAAGGAA
ATGGGGAAGAGCTCGATCACCATCGTCACCGACTTCCGCCGCGCCGGAAACGAGGCGGTGATCGCCTCGGCCGAGACGGT
AAGGGTCCTGGTCGACGCCAAGACCCTGCAAAAGACGGAGATCCCGGCCGGGCTGCGCAGCGCCCTGGAGAAGGGCGCCC
CGGGTACGGTGGTGGACCACGCGGGGTACCTGCAGCTGGACGATTTCGTATTTTCCTAA

Upstream 100 bases:

>100_bases
TTCGGCATAGTGATACTAATTTAGCATAATTGAAACATTGTTCTGATATAAAGCCGGGCGGTTGCCGGTTGAGCCAGGGT
CGGGGAAAGGCGGGGTGGTC

Downstream 100 bases:

>100_bases
AACAGCAGTTTTTTTTCTTGACATAAAAGTGGTATTAAAGTACTTATTTACTCAAATAGAAATTTCGACATGCAACTCAA
ACCATAAAAAGAAGTCAAGG

Product: acyl-CoA thioesterase superfamily protein

Products: NA

Alternate protein names: Acyl-CoA Thioesterase Superfamily Protein; 4-Hydroxybenzoyl-CoA Thioesterase

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MEQFRYYLRVRYYECDMQKVVYNANYANYAGVATIEFLRALAGPGLLQGDLDFMVVSQNMEWRAPARFDEVLEISVAVKE
MGKSSITIVTDFRRAGNEAVIASAETVRVLVDAKTLQKTEIPAGLRSALEKGAPGTVVDHAGYLQLDDFVFS

Sequences:

>Translated_152_residues
MEQFRYYLRVRYYECDMQKVVYNANYANYAGVATIEFLRALAGPGLLQGDLDFMVVSQNMEWRAPARFDEVLEISVAVKE
MGKSSITIVTDFRRAGNEAVIASAETVRVLVDAKTLQKTEIPAGLRSALEKGAPGTVVDHAGYLQLDDFVFS
>Mature_152_residues
MEQFRYYLRVRYYECDMQKVVYNANYANYAGVATIEFLRALAGPGLLQGDLDFMVVSQNMEWRAPARFDEVLEISVAVKE
MGKSSITIVTDFRRAGNEAVIASAETVRVLVDAKTLQKTEIPAGLRSALEKGAPGTVVDHAGYLQLDDFVFS

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16954; Mature: 16954

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQFRYYLRVRYYECDMQKVVYNANYANYAGVATIEFLRALAGPGLLQGDLDFMVVSQNM
CCCCEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEEECCC
EWRAPARFDEVLEISVAVKEMGKSSITIVTDFRRAGNEAVIASAETVRVLVDAKTLQKTE
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCEEEEEEEHHHHHHHC
IPAGLRSALEKGAPGTVVDHAGYLQLDDFVFS
CCHHHHHHHHCCCCCCEECCCCCEEECCEECC
>Mature Secondary Structure
MEQFRYYLRVRYYECDMQKVVYNANYANYAGVATIEFLRALAGPGLLQGDLDFMVVSQNM
CCCCEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEEECCC
EWRAPARFDEVLEISVAVKEMGKSSITIVTDFRRAGNEAVIASAETVRVLVDAKTLQKTE
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCEEEEEEEHHHHHHHC
IPAGLRSALEKGAPGTVVDHAGYLQLDDFVFS
CCHHHHHHHHCCCCCCEECCCCCEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA