Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is bamA [H]

Identifier: 197117830

GI number: 197117830

Start: 1666047

End: 1667186

Strand: Direct

Name: bamA [H]

Synonym: Gbem_1443

Alternate gene names: 197117830

Gene position: 1666047-1667186 (Clockwise)

Preceding gene: 197117829

Following gene: 197117831

Centisome position: 36.1

GC content: 62.72

Gene sequence:

>1140_bases
GTGGCAACTACCGACGAGATCATCAAGAGAACCGCACCGTCCCATCTGATCGATCACAACCTGATCGACCGCGACGTGGA
GAGCCTTTGCGACGGGATGGTGAAGTACGAGAAGCGTCCCGCGAAGAGAAAGGACGGCAGCGTGGTGCAGGGGCTGTACA
ACGCCTGGATCATCTTCAACAACCCCAAGCAGTTCAACTCCTATACCACCGACATGGTGAAGGCGACCATCCTGGCCTTT
CGCCGCGCTTCCGTCGACCGCGAGGTCAACGCCGTGGTCTTCACCGGCGTGGGGGAGAAGGCTTTCTGCACCGGCGGCAA
CACCAAGGAGTACGCGGAGTACTACGCGGGGAACCCGCAGGAGTACCGCCAGTACATGCGGCTCTTCAACGACATGGTTT
CCGCCATCCTCGGGTGCGACAAGCCGGTCGTCTGCAGGGTGAACGGGATGAGGATTGGCGGCGGCCAGGAGATCGGCATG
GCCTGCGACTTCAGCGTCGCGCACGACTTGGCCAACTTCGGCCAGGCCGGTCCCAAGCACGGTTCCGCTGCCATCGGCGG
CGCTACCGACTTCCTCCCGGTCATGATCGGCTGCGAGCAGGCCATGGTCTCCGGCACGCTGTGCGAGCCGTTCTCGGCGC
ACAAGGCGGCGCGTCTGGGCATCATCGCAGACGTGGTTCCGGCGCTTAAGATCGACGGCAAGTTCGTCGCCAATCCGACG
GTCGTCACCGACAAGTTCCTGGACGAGTACGGCCGTGTCATCCACGGCGAGTTCAGGACCGGCGCCCAGTTCAAGGAAGG
GCAGGCCCTTATCAAGGAAGGGGAGATCGACCTCTCCATGCTGGACCAGAAGGTGGATGAACTCTGCGCGAAGCTGATCG
ACACCTTCCCCGAGTGCATGACCAAGAGCCTCGAGGAGTTGAGGAAGCCGAAGCTGGACGCCTGGAACGCCAACAAGGAA
AACTCCAGGGCATGGCTCGCGCTCAACATGATGAACGAGGCGCGCACCGGCTTCAGGGCCTTCAACGAGGGGACCAAGGA
GACCGGCCGCGAGATCGAATTCGTGAAGCTGCGCCAGGGGTTGGCCGTCGGTACCCCCTGGACCGAGGAGCTCGTGGACA
GCCTGATGCCGGGAGCGTAG

Upstream 100 bases:

>100_bases
TTTTTTTTCTTGACATAAAAGTGGTATTAAAGTACTTATTTACTCAAATAGAAATTTCGACATGCAACTCAAACCATAAA
AAGAAGTCAAGGGGGAAGCC

Downstream 100 bases:

>100_bases
GGGTAGGCGGATCAAGATGTGCCGCGGCAGGTGCGCGAGCGCTCCGCGGCACGCCTTAAAATGGTAAAAAAGTACTTTTA
TGCCAGAACTGGCATCGGTC

Product: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase

Products: NA

Alternate protein names: DHNA-CoA synthase [H]

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MATTDEIIKRTAPSHLIDHNLIDRDVESLCDGMVKYEKRPAKRKDGSVVQGLYNAWIIFNNPKQFNSYTTDMVKATILAF
RRASVDREVNAVVFTGVGEKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMVSAILGCDKPVVCRVNGMRIGGGQEIGM
ACDFSVAHDLANFGQAGPKHGSAAIGGATDFLPVMIGCEQAMVSGTLCEPFSAHKAARLGIIADVVPALKIDGKFVANPT
VVTDKFLDEYGRVIHGEFRTGAQFKEGQALIKEGEIDLSMLDQKVDELCAKLIDTFPECMTKSLEELRKPKLDAWNANKE
NSRAWLALNMMNEARTGFRAFNEGTKETGREIEFVKLRQGLAVGTPWTEELVDSLMPGA

Sequences:

>Translated_379_residues
MATTDEIIKRTAPSHLIDHNLIDRDVESLCDGMVKYEKRPAKRKDGSVVQGLYNAWIIFNNPKQFNSYTTDMVKATILAF
RRASVDREVNAVVFTGVGEKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMVSAILGCDKPVVCRVNGMRIGGGQEIGM
ACDFSVAHDLANFGQAGPKHGSAAIGGATDFLPVMIGCEQAMVSGTLCEPFSAHKAARLGIIADVVPALKIDGKFVANPT
VVTDKFLDEYGRVIHGEFRTGAQFKEGQALIKEGEIDLSMLDQKVDELCAKLIDTFPECMTKSLEELRKPKLDAWNANKE
NSRAWLALNMMNEARTGFRAFNEGTKETGREIEFVKLRQGLAVGTPWTEELVDSLMPGA
>Mature_378_residues
ATTDEIIKRTAPSHLIDHNLIDRDVESLCDGMVKYEKRPAKRKDGSVVQGLYNAWIIFNNPKQFNSYTTDMVKATILAFR
RASVDREVNAVVFTGVGEKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMVSAILGCDKPVVCRVNGMRIGGGQEIGMA
CDFSVAHDLANFGQAGPKHGSAAIGGATDFLPVMIGCEQAMVSGTLCEPFSAHKAARLGIIADVVPALKIDGKFVANPTV
VTDKFLDEYGRVIHGEFRTGAQFKEGQALIKEGEIDLSMLDQKVDELCAKLIDTFPECMTKSLEELRKPKLDAWNANKEN
SRAWLALNMMNEARTGFRAFNEGTKETGREIEFVKLRQGLAVGTPWTEELVDSLMPGA

Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]

COG id: COG0447

COG function: function code H; Dihydroxynaphthoic acid synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]

Homologues:

Organism=Homo sapiens, GI194097323, Length=194, Percent_Identity=28.3505154639175, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI1788597, Length=182, Percent_Identity=33.5164835164835, Blast_Score=105, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17554946, Length=187, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17535521, Length=234, Percent_Identity=22.6495726495727, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17549921, Length=173, Percent_Identity=28.3236994219653, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI20129971, Length=182, Percent_Identity=33.5164835164835, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24653477, Length=182, Percent_Identity=33.5164835164835, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24654903, Length=241, Percent_Identity=27.3858921161826, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014748
- InterPro:   IPR001753
- InterPro:   IPR018376
- InterPro:   IPR010198 [H]

Pfam domain/function: PF00378 ECH [H]

EC number: =4.1.3.36 [H]

Molecular weight: Translated: 41789; Mature: 41658

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTDEIIKRTAPSHLIDHNLIDRDVESLCDGMVKYEKRPAKRKDGSVVQGLYNAWIIFN
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEC
NPKQFNSYTTDMVKATILAFRRASVDREVNAVVFTGVGEKAFCTGGNTKEYAEYYAGNPQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHCCCHH
EYRQYMRLFNDMVSAILGCDKPVVCRVNGMRIGGGQEIGMACDFSVAHDLANFGQAGPKH
HHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCEECHHHHHHHHHHCCCCCCC
GSAAIGGATDFLPVMIGCEQAMVSGTLCEPFSAHKAARLGIIADVVPALKIDGKFVANPT
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEECCEEECCCC
VVTDKFLDEYGRVIHGEFRTGAQFKEGQALIKEGEIDLSMLDQKVDELCAKLIDTFPECM
HHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TKSLEELRKPKLDAWNANKENSRAWLALNMMNEARTGFRAFNEGTKETGREIEFVKLRQG
HHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHCCCEEHHHHHCC
LAVGTPWTEELVDSLMPGA
CCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
ATTDEIIKRTAPSHLIDHNLIDRDVESLCDGMVKYEKRPAKRKDGSVVQGLYNAWIIFN
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEC
NPKQFNSYTTDMVKATILAFRRASVDREVNAVVFTGVGEKAFCTGGNTKEYAEYYAGNPQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHCCCHH
EYRQYMRLFNDMVSAILGCDKPVVCRVNGMRIGGGQEIGMACDFSVAHDLANFGQAGPKH
HHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCEECHHHHHHHHHHCCCCCCC
GSAAIGGATDFLPVMIGCEQAMVSGTLCEPFSAHKAARLGIIADVVPALKIDGKFVANPT
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEECCEEECCCC
VVTDKFLDEYGRVIHGEFRTGAQFKEGQALIKEGEIDLSMLDQKVDELCAKLIDTFPECM
HHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TKSLEELRKPKLDAWNANKENSRAWLALNMMNEARTGFRAFNEGTKETGREIEFVKLRQG
HHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHCCCEEHHHHHCC
LAVGTPWTEELVDSLMPGA
CCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]