| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cat2 [H]
Identifier: 197117826
GI number: 197117826
Start: 1662826
End: 1664139
Strand: Direct
Name: cat2 [H]
Synonym: Gbem_1439
Alternate gene names: 197117826
Gene position: 1662826-1664139 (Clockwise)
Preceding gene: 197117825
Following gene: 197117829
Centisome position: 36.03
GC content: 62.63
Gene sequence:
>1314_bases GTGAATACTATCGCCCTTGCAAAAAGCAACTTCGAACAGGAATACCGGCAAAAACTCTGCTCGGCTGCCGAAGCTGCCAC CATTGTCAAATCGGGAGATCACCTCTGCTTTCCACTGGGCGTAGGCGAGCCGACCTTGTTCGTCAAGGCGCTCGCGGCAC GAAAGCGTGAGCTCGAAGGTGTGGTGGTGAACCAGCAGCATCATCTCTGCCCCGACTACTTCACCGAGGACTCCACCCCG CACATCAAGGTCAACGCGTGGTTCACCAGCCACGTGTCGCGCGAAGCGGTGCAGAAGGGTTGGGCGGACTTCGTCCCCAA CCACTTCCACGAAGTGCCCAAGCTGCTGCGCGAGTACTGGCCGGTCGACGTCGCCGGAACCGTGGTCTCCCCGATGGACG AGTACGGCTACTTCACCTGCAGCCTCTCGGTCGGCTACACCATGGAGGCGGTGAAGAAGGCGGAGAAGGTGGTGGTTCAG GTCAACCCCAACGCGCCGCGCACCCACGGCAACTGTCACATCCACATCTCCGAGGTGGACCACATCATCGAGTGCCATGA GCCGCTCAAGGAACTGGAAATCCCCAAGATTTCACCGATCGAGGAAGCCATCGGCGCTTACCTCGCCGAGATGGTTCCCG ACGGCTCCTGTCTGCAGCTAGGCTGGGGCGGCATCCCCAACGCGGTCACCCGCGCGCTCATGACCAAGAAGGACCTGGGC GTCCACACCGAACTCATGTCCGACGGGATCGTGGACCTGATGCTGTCCGGCGCGGTCAACAACTCCAGGAAGACCATCCA CCGCGGCAAGGCCTTGGCGACCTTTGCGCTCGGGACCAAGCGCCTGTTCGACTTCATGCACGAGAACCCGATGATCGAGA TGCACCCGGTCGACTACGTGAACGACCCGGCCGTGATCGGGAGCATCGACAACGTGGTCGCCATCAACGCCACCATCCAG GTCGATCTCTTGGGGCAGTGCTGTTCCGAGTCCTTCGGGCACCTGCAGTGGAGCGGGACCGGCGGACAGGCCGACTTCGC GCGCGGCGCCAACAGGTCGCGCGGCGGCAAGGCCTTCATCACCACCGCCTCCACCGCGAAAAACGGCACCATCTCCTGCA TCGTGCCGACGCTCACCGCGGGTGCCTCCGTCACCACCAGCAAGAACGACGTGGACCACGTCGTGACCGAGTTCGGCGTC GCTAAGCTCAGGGGGCAGACCGCGAAGCAGCGCGCCATGAACCTGATCAACGTGGCGCACCCGGACTTCCGCGGCGAGCT GATGGAAGCGGCTCGCAGGATGAATAGGATTTAG
Upstream 100 bases:
>100_bases AGGAAATCCGGATTTTGGTACCCAAGTTGCTATTAACCTTCTCCAGAAGCAGCCCGCAGGCAAGGCCGCACACAACAACC ACAAACAGGAGGAAGCACCC
Downstream 100 bases:
>100_bases CTGGAAAAGGGGGGGGGTAGGGAAGCAGGCGCCTTTCAGTTCCCCCTCCACCTGCGGGAGGGGGGACTGAGGAGGAGATG AGAGCGGTTGAGGGGGCGGG
Product: acyl-CoA--carboxylate CoA transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MNTIALAKSNFEQEYRQKLCSAAEAATIVKSGDHLCFPLGVGEPTLFVKALAARKRELEGVVVNQQHHLCPDYFTEDSTP HIKVNAWFTSHVSREAVQKGWADFVPNHFHEVPKLLREYWPVDVAGTVVSPMDEYGYFTCSLSVGYTMEAVKKAEKVVVQ VNPNAPRTHGNCHIHISEVDHIIECHEPLKELEIPKISPIEEAIGAYLAEMVPDGSCLQLGWGGIPNAVTRALMTKKDLG VHTELMSDGIVDLMLSGAVNNSRKTIHRGKALATFALGTKRLFDFMHENPMIEMHPVDYVNDPAVIGSIDNVVAINATIQ VDLLGQCCSESFGHLQWSGTGGQADFARGANRSRGGKAFITTASTAKNGTISCIVPTLTAGASVTTSKNDVDHVVTEFGV AKLRGQTAKQRAMNLINVAHPDFRGELMEAARRMNRI
Sequences:
>Translated_437_residues MNTIALAKSNFEQEYRQKLCSAAEAATIVKSGDHLCFPLGVGEPTLFVKALAARKRELEGVVVNQQHHLCPDYFTEDSTP HIKVNAWFTSHVSREAVQKGWADFVPNHFHEVPKLLREYWPVDVAGTVVSPMDEYGYFTCSLSVGYTMEAVKKAEKVVVQ VNPNAPRTHGNCHIHISEVDHIIECHEPLKELEIPKISPIEEAIGAYLAEMVPDGSCLQLGWGGIPNAVTRALMTKKDLG VHTELMSDGIVDLMLSGAVNNSRKTIHRGKALATFALGTKRLFDFMHENPMIEMHPVDYVNDPAVIGSIDNVVAINATIQ VDLLGQCCSESFGHLQWSGTGGQADFARGANRSRGGKAFITTASTAKNGTISCIVPTLTAGASVTTSKNDVDHVVTEFGV AKLRGQTAKQRAMNLINVAHPDFRGELMEAARRMNRI >Mature_437_residues MNTIALAKSNFEQEYRQKLCSAAEAATIVKSGDHLCFPLGVGEPTLFVKALAARKRELEGVVVNQQHHLCPDYFTEDSTP HIKVNAWFTSHVSREAVQKGWADFVPNHFHEVPKLLREYWPVDVAGTVVSPMDEYGYFTCSLSVGYTMEAVKKAEKVVVQ VNPNAPRTHGNCHIHISEVDHIIECHEPLKELEIPKISPIEEAIGAYLAEMVPDGSCLQLGWGGIPNAVTRALMTKKDLG VHTELMSDGIVDLMLSGAVNNSRKTIHRGKALATFALGTKRLFDFMHENPMIEMHPVDYVNDPAVIGSIDNVVAINATIQ VDLLGQCCSESFGHLQWSGTGGQADFARGANRSRGGKAFITTASTAKNGTISCIVPTLTAGASVTTSKNDVDHVVTEFGV AKLRGQTAKQRAMNLINVAHPDFRGELMEAARRMNRI
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=464, Percent_Identity=24.1379310344828, Blast_Score=88, Evalue=1e-18, Organism=Caenorhabditis elegans, GI32563853, Length=427, Percent_Identity=38.4074941451991, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17538151, Length=426, Percent_Identity=34.5070422535211, Blast_Score=233, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6319456, Length=399, Percent_Identity=25.5639097744361, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI21358615, Length=415, Percent_Identity=40, Blast_Score=281, Evalue=7e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 47767; Mature: 47767
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIALAKSNFEQEYRQKLCSAAEAATIVKSGDHLCFPLGVGEPTLFVKALAARKRELEG CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCC VVVNQQHHLCPDYFTEDSTPHIKVNAWFTSHVSREAVQKGWADFVPNHFHEVPKLLREYW EEECCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHC PVDVAGTVVSPMDEYGYFTCSLSVGYTMEAVKKAEKVVVQVNPNAPRTHGNCHIHISEVD CCCCCCHHHCCHHHCCEEEEEEECCCHHHHHHHHHEEEEEECCCCCCCCCCEEEEHHHHH HIIECHEPLKELEIPKISPIEEAIGAYLAEMVPDGSCLQLGWGGIPNAVTRALMTKKDLG HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCC VHTELMSDGIVDLMLSGAVNNSRKTIHRGKALATFALGTKRLFDFMHENPMIEMHPVDYV CHHHHHHCCHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCC NDPAVIGSIDNVVAINATIQVDLLGQCCSESFGHLQWSGTGGQADFARGANRSRGGKAFI CCCCEEECCCCEEEEEEEEEEEHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCCCCEEEE TTASTAKNGTISCIVPTLTAGASVTTSKNDVDHVVTEFGVAKLRGQTAKQRAMNLINVAH EECCCCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC PDFRGELMEAARRMNRI CCHHHHHHHHHHHHCCC >Mature Secondary Structure MNTIALAKSNFEQEYRQKLCSAAEAATIVKSGDHLCFPLGVGEPTLFVKALAARKRELEG CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCC VVVNQQHHLCPDYFTEDSTPHIKVNAWFTSHVSREAVQKGWADFVPNHFHEVPKLLREYW EEECCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHC PVDVAGTVVSPMDEYGYFTCSLSVGYTMEAVKKAEKVVVQVNPNAPRTHGNCHIHISEVD CCCCCCHHHCCHHHCCEEEEEEECCCHHHHHHHHHEEEEEECCCCCCCCCCEEEEHHHHH HIIECHEPLKELEIPKISPIEEAIGAYLAEMVPDGSCLQLGWGGIPNAVTRALMTKKDLG HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCC VHTELMSDGIVDLMLSGAVNNSRKTIHRGKALATFALGTKRLFDFMHENPMIEMHPVDYV CHHHHHHCCHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCC NDPAVIGSIDNVVAINATIQVDLLGQCCSESFGHLQWSGTGGQADFARGANRSRGGKAFI CCCCEEECCCCEEEEEEEEEEEHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCCCCEEEE TTASTAKNGTISCIVPTLTAGASVTTSKNDVDHVVTEFGVAKLRGQTAKQRAMNLINVAH EECCCCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC PDFRGELMEAARRMNRI CCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]