| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is zraS [H]
Identifier: 197117813
GI number: 197117813
Start: 1643194
End: 1645155
Strand: Direct
Name: zraS [H]
Synonym: Gbem_1425
Alternate gene names: 197117813
Gene position: 1643194-1645155 (Clockwise)
Preceding gene: 197117812
Following gene: 197117814
Centisome position: 35.6
GC content: 62.23
Gene sequence:
>1962_bases ATGATTGAGCTTGACCAAATTGGTGTAATATGGTACCACTATACCATTATTACGCCGGTCACCCGAAACGGTCTGGACAA AGGTACCTTCCCCGCTGGGGGAGGAGCTCTGCAGGCGAGGTCGTCGACCTACCAGGAAAAGGATCGTTACATGACCGCCT TTTTCCGCACATTCAAACTCCCGCTTGCCCTTTTGCTTATCGTAGGCCTGACCGCCTGCGCCTTCATCACCATCCGCCGC GCCAACAACGGGGTCCGCGCCGAGGCGCGCGCCCGCTTCTTCGAACAGTACAACCGTCAGCAGTACCTCGTCGCCGAACT CACAGCGCACTCCCTCGATGAAATGTTCGCCACCTTCAGCCGCAACCTCGAACTGGTCGCCGGCCTCTTCGACGGCAAAG AGGTCGACCGCGAACAGTCGCAACGGCTCAAGGTGCATCTGGAAAAGATCTACGGCTCGCTGCTCGGTACCCCCGTTATC GACCTGGTCGTCTTCGACAGCAAGGGGGTCGCCGTCGCCATAGAGCCGCACGACAATTTCACCTTGGGGCGCAGTTACGC CTGGCGCGACTACTATCGGTGGGTGCGGGACCAGCGGCAGCCGGGGCGGATGTACATCTCGCCCTTCATGCAGTTGGCGG GGGGGCGGAAACGCGGGGTAAAGGAGTTGATCGTAGCTAGAGGGATCTACGGCCCACGCGGCGAGTTCAACGGCGTGGTC GCCTGCACGCTCGACTTCGACAAGCTGGCCCGAAAGCATGTCCTCTCCGTCAAGATCGGCAAGCACGGCCAGGCCTGGCT CATGGACAGCACCACCAGGACCATCCTGGTCGACCCGAACGGCAGGATCGCGGGGCAGACCTTCGACGAGGCGCTGCGGC GCAAATGGCCGCGCCTTTACGACCTGCTCCTTTCGGCTGAGGACGGCAAACCCGGCAGCGGCTGGTACGAGTTCGAGGAC CCGGCCGACCCGCGCCTGAAGGTCCGCAAGCTGGTCAGCTACCACCCGGTGCGCCTGGAAAACCGGCTCTGGACAGTGGG GGTGACCACGCCGGAAAGGGAGGTCGAAGCGCTCCTCTCTTCGTTCCTGCAGCGGCAGGAGGCCATCTCCACCACGCTCC TCGTCACCATAATCGGAGGAGCGGCATTCCTCCTCGCGCTGCTTTATCACTGGAACCGCACGCTTACCGCACAGGTCGGC CTGCACACCCGCGCCTTGAGCGAGACACATTCGCGCCTGGAGGCAACCTTCGACGAATTGCTCGTCGCCAAGAAGGTGGC CGCGGTCGGGCATCTGGCGCTCGGGCTCGCCCACGAGATCCGCAACCCCCTTTCCGCCATCCAGATGAACATGCAGATGA TCCGCAAGAAGATCGAGCCCACCGGGGTCCTCTGCGAGAACTTCTCCATTGCCGACGGCGAAATCCAGCGCCTGAACCGC CTGTTGAAAGACGTTCTGGATTTCGCGCGCCCACGCCCCCTGCGGCTGCAGACGGTCGATCTGGCCGAAATAGTGCGGCG CCTGCTGCAACTGGTTGACCAACGCCTGGCCCAGTACGGCGTTACCCCCACCACCGATATCGAATCGCCGCTTGAGCTTG TCTGCGACCCCGAGCAGATCCACCAGGTGCTCTTGAATCTGGTGCTGAACGCCATGGAGGCGATGGATGGGGTCGCCGGT GACAGGACCCTCAAGGTCATCGCCTACCGCAAAGAGAGCCAGGCCTACGTACTTGTGAGCGATTCCGGGAGGGGGATAGG CCCCGACAAGTGCGAGCAGCTGTTCGATCCCTTTTACACAACCAAGGTTTCAGGGGGAGGGCTTGGGTTGTCCATCCTGC AGACCATCGTCCTCTCTCATGGCGGGTCCGTTTCCGTGACGGGCGGGACCGGCGCCGGCGCTACCTTTACCGTCGTACTT CCCCTCGCGGGGCCTTCAGGAACTGGAGAAAAAACACCGTGA
Upstream 100 bases:
>100_bases TCAAGGGAGGGGGAATTCGGAAACAGTTTGTAGGGGGGTGGGGGGAGGTAGAGGGAAGGGGATCTAATCGTCGCGGCGCG GCCCCTAGAGGGACAAGGGC
Downstream 100 bases:
>100_bases ACACCATTTTGATAGCTGACGATGACATCGCCATCCGGCGCACGCTGGAGCTGCACCTGACCGAAGAAGGTTATTCGGTG GTGACGGCCGCGAACGGTCC
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 653; Mature: 653
Protein sequence:
>653_residues MIELDQIGVIWYHYTIITPVTRNGLDKGTFPAGGGALQARSSTYQEKDRYMTAFFRTFKLPLALLLIVGLTACAFITIRR ANNGVRAEARARFFEQYNRQQYLVAELTAHSLDEMFATFSRNLELVAGLFDGKEVDREQSQRLKVHLEKIYGSLLGTPVI DLVVFDSKGVAVAIEPHDNFTLGRSYAWRDYYRWVRDQRQPGRMYISPFMQLAGGRKRGVKELIVARGIYGPRGEFNGVV ACTLDFDKLARKHVLSVKIGKHGQAWLMDSTTRTILVDPNGRIAGQTFDEALRRKWPRLYDLLLSAEDGKPGSGWYEFED PADPRLKVRKLVSYHPVRLENRLWTVGVTTPEREVEALLSSFLQRQEAISTTLLVTIIGGAAFLLALLYHWNRTLTAQVG LHTRALSETHSRLEATFDELLVAKKVAAVGHLALGLAHEIRNPLSAIQMNMQMIRKKIEPTGVLCENFSIADGEIQRLNR LLKDVLDFARPRPLRLQTVDLAEIVRRLLQLVDQRLAQYGVTPTTDIESPLELVCDPEQIHQVLLNLVLNAMEAMDGVAG DRTLKVIAYRKESQAYVLVSDSGRGIGPDKCEQLFDPFYTTKVSGGGLGLSILQTIVLSHGGSVSVTGGTGAGATFTVVL PLAGPSGTGEKTP
Sequences:
>Translated_653_residues MIELDQIGVIWYHYTIITPVTRNGLDKGTFPAGGGALQARSSTYQEKDRYMTAFFRTFKLPLALLLIVGLTACAFITIRR ANNGVRAEARARFFEQYNRQQYLVAELTAHSLDEMFATFSRNLELVAGLFDGKEVDREQSQRLKVHLEKIYGSLLGTPVI DLVVFDSKGVAVAIEPHDNFTLGRSYAWRDYYRWVRDQRQPGRMYISPFMQLAGGRKRGVKELIVARGIYGPRGEFNGVV ACTLDFDKLARKHVLSVKIGKHGQAWLMDSTTRTILVDPNGRIAGQTFDEALRRKWPRLYDLLLSAEDGKPGSGWYEFED PADPRLKVRKLVSYHPVRLENRLWTVGVTTPEREVEALLSSFLQRQEAISTTLLVTIIGGAAFLLALLYHWNRTLTAQVG LHTRALSETHSRLEATFDELLVAKKVAAVGHLALGLAHEIRNPLSAIQMNMQMIRKKIEPTGVLCENFSIADGEIQRLNR LLKDVLDFARPRPLRLQTVDLAEIVRRLLQLVDQRLAQYGVTPTTDIESPLELVCDPEQIHQVLLNLVLNAMEAMDGVAG DRTLKVIAYRKESQAYVLVSDSGRGIGPDKCEQLFDPFYTTKVSGGGLGLSILQTIVLSHGGSVSVTGGTGAGATFTVVL PLAGPSGTGEKTP >Mature_653_residues MIELDQIGVIWYHYTIITPVTRNGLDKGTFPAGGGALQARSSTYQEKDRYMTAFFRTFKLPLALLLIVGLTACAFITIRR ANNGVRAEARARFFEQYNRQQYLVAELTAHSLDEMFATFSRNLELVAGLFDGKEVDREQSQRLKVHLEKIYGSLLGTPVI DLVVFDSKGVAVAIEPHDNFTLGRSYAWRDYYRWVRDQRQPGRMYISPFMQLAGGRKRGVKELIVARGIYGPRGEFNGVV ACTLDFDKLARKHVLSVKIGKHGQAWLMDSTTRTILVDPNGRIAGQTFDEALRRKWPRLYDLLLSAEDGKPGSGWYEFED PADPRLKVRKLVSYHPVRLENRLWTVGVTTPEREVEALLSSFLQRQEAISTTLLVTIIGGAAFLLALLYHWNRTLTAQVG LHTRALSETHSRLEATFDELLVAKKVAAVGHLALGLAHEIRNPLSAIQMNMQMIRKKIEPTGVLCENFSIADGEIQRLNR LLKDVLDFARPRPLRLQTVDLAEIVRRLLQLVDQRLAQYGVTPTTDIESPLELVCDPEQIHQVLLNLVLNAMEAMDGVAG DRTLKVIAYRKESQAYVLVSDSGRGIGPDKCEQLFDPFYTTKVSGGGLGLSILQTIVLSHGGSVSVTGGTGAGATFTVVL PLAGPSGTGEKTP
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=229, Percent_Identity=38.4279475982533, Blast_Score=150, Evalue=4e-37, Organism=Escherichia coli, GI1788549, Length=227, Percent_Identity=36.1233480176211, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1790300, Length=234, Percent_Identity=33.7606837606838, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI145693157, Length=252, Percent_Identity=27.3809523809524, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1786600, Length=267, Percent_Identity=25.4681647940075, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789808, Length=218, Percent_Identity=25.6880733944954, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790346, Length=240, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI87081816, Length=272, Percent_Identity=28.6764705882353, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787894, Length=256, Percent_Identity=27.734375, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788393, Length=220, Percent_Identity=25.4545454545455, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI48994928, Length=230, Percent_Identity=26.9565217391304, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1786783, Length=226, Percent_Identity=25.6637168141593, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1786912, Length=221, Percent_Identity=27.1493212669683, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788713, Length=232, Percent_Identity=24.5689655172414, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1789149, Length=274, Percent_Identity=26.2773722627737, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 72660; Mature: 72660
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELDQIGVIWYHYTIITPVTRNGLDKGTFPAGGGALQARSSTYQEKDRYMTAFFRTFKL CCEEHHEEEEEEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH PLALLLIVGLTACAFITIRRANNGVRAEARARFFEQYNRQQYLVAELTAHSLDEMFATFS HHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RNLELVAGLFDGKEVDREQSQRLKVHLEKIYGSLLGTPVIDLVVFDSKGVAVAIEPHDNF CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCC TLGRSYAWRDYYRWVRDQRQPGRMYISPFMQLAGGRKRGVKELIVARGIYGPRGEFNGVV CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHCCHHHHHHHHCCCCCCCCCCCEE ACTLDFDKLARKHVLSVKIGKHGQAWLMDSTTRTILVDPNGRIAGQTFDEALRRKWPRLY EEEECHHHHHHHHEEEEEECCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHCHHHH DLLLSAEDGKPGSGWYEFEDPADPRLKVRKLVSYHPVRLENRLWTVGVTTPEREVEALLS HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCEEEEEECCCCHHHHHHHHH SFLQRQEAISTTLLVTIIGGAAFLLALLYHWNRTLTAQVGLHTRALSETHSRLEATFDEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH LVAKKVAAVGHLALGLAHEIRNPLSAIQMNMQMIRKKIEPTGVLCENFSIADGEIQRLNR HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHH LLKDVLDFARPRPLRLQTVDLAEIVRRLLQLVDQRLAQYGVTPTTDIESPLELVCDPEQI HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHH HQVLLNLVLNAMEAMDGVAGDRTLKVIAYRKESQAYVLVSDSGRGIGPDKCEQLFDPFYT HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHCCHHE TKVSGGGLGLSILQTIVLSHGGSVSVTGGTGAGATFTVVLPLAGPSGTGEKTP EEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MIELDQIGVIWYHYTIITPVTRNGLDKGTFPAGGGALQARSSTYQEKDRYMTAFFRTFKL CCEEHHEEEEEEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH PLALLLIVGLTACAFITIRRANNGVRAEARARFFEQYNRQQYLVAELTAHSLDEMFATFS HHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RNLELVAGLFDGKEVDREQSQRLKVHLEKIYGSLLGTPVIDLVVFDSKGVAVAIEPHDNF CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCC TLGRSYAWRDYYRWVRDQRQPGRMYISPFMQLAGGRKRGVKELIVARGIYGPRGEFNGVV CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHCCHHHHHHHHCCCCCCCCCCCEE ACTLDFDKLARKHVLSVKIGKHGQAWLMDSTTRTILVDPNGRIAGQTFDEALRRKWPRLY EEEECHHHHHHHHEEEEEECCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHCHHHH DLLLSAEDGKPGSGWYEFEDPADPRLKVRKLVSYHPVRLENRLWTVGVTTPEREVEALLS HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCEEEEEECCCCHHHHHHHHH SFLQRQEAISTTLLVTIIGGAAFLLALLYHWNRTLTAQVGLHTRALSETHSRLEATFDEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH LVAKKVAAVGHLALGLAHEIRNPLSAIQMNMQMIRKKIEPTGVLCENFSIADGEIQRLNR HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHH LLKDVLDFARPRPLRLQTVDLAEIVRRLLQLVDQRLAQYGVTPTTDIESPLELVCDPEQI HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHH HQVLLNLVLNAMEAMDGVAGDRTLKVIAYRKESQAYVLVSDSGRGIGPDKCEQLFDPFYT HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHCCHHE TKVSGGGLGLSILQTIVLSHGGSVSVTGGTGAGATFTVVLPLAGPSGTGEKTP EEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]