| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is iorA-2 [H]
Identifier: 197117807
GI number: 197117807
Start: 1636368
End: 1638137
Strand: Direct
Name: iorA-2 [H]
Synonym: Gbem_1419
Alternate gene names: 197117807
Gene position: 1636368-1638137 (Clockwise)
Preceding gene: 197117806
Following gene: 197117808
Centisome position: 35.46
GC content: 63.5
Gene sequence:
>1770_bases ATGAAAAAGATAATCTCCGGCAACGAAGCGATTGCCTTGAGCTTTGAAGATTCCGGCGGCGTCTTCGCCTCCGGCTATCC CGGCACGCCCAGCACAGAAACGCTGGAAGAGGTCGCCCGCCTGGGAAACGTGTACTGCGAATGGGCCCCGAACGAAAAGG TCGGGCTGGAATCGGCCATCGGCGCCTCCCTTGCGGGCGGCAGGGCGCTCGCCACCATGAAGCACGTGGGGGTGAACGTC GCGGCCGACGCGTTGATGACCCTCACCTATACCGGGGTGAACGCGGGCCTCATCCTGATGGCGGCCGACGACCCGGGGAT GCACTCCTCCCAGAACGAGCAGGACAGCCGCAACTACGCGAAGTTCGCCAAGATCCCGATGCTCGACCCCGCCGATTCCC AGGAGGCCTACGACTACGTCCGGGCCGGGTTCGAGATCTCGGAGCGCTTCGACACCCCGGTTATGCTGCGCACCACCACC CGGATCTCACACGCGAAGGGGGTCGTGGAGCAGAAGGGGAAGGTAGCGGCGAAGGTGGGAGAGCTGGCGAAGGACGTGCC GAAGTACGTGATGCTTCCCAACTTCGGGAAGATCAAGCACGTCGCGGTCGAGGAGCGGCTCTTGAAGCTGCAGGCCTTCG CGGAGGAGTCTCCGCTTAACCGGGTGGAGATGAACGACCCCGAACTGGGGATCATCACCTCCGGCATCTCCTACCAGCAC GCGAAAGAAGCGTTCCCGCAGGCCTCCTTCCTGAAGCTCGGGCTGGTGCACCCGCTGCCGGAGCAAAAGATCCGCGACTT CGCCTCCAAGGTGGGGCGGCTCATGGTGGTGGAGGAGATGGACGCCATCTTCGAGGAGCAGATCCGCGCCATGGGGATCC GGGTCGACATAGGCAAGGACCGCATCTCGCTTTGCGGCGAGGTCTGCGCCGACATCGTCCGCGAGGCTGCCGGCGCCCCG GCCACCTCCGCGAAGACTACGCCTGCGGGCGACCTCCCCCTGCGCCCCCCGACCTTCTGCCCCGGCTGCGCCCACCGCGG CCTTTATTCCATCCTGAGCAAGCTGAAGGTCTTCGTATCCGGAGACATCGGCTGCTACACCCTGGGCGCGCTCCCTCCCT TGAGCGCCATGCATACCTGCATCTGCATGGGGGCCAGCATCAGCGCTGCCCACGGCATCGCCAAGGTGAACGAGATCGCG GGGAGGACCGAAAAACCGGTGGCCGTCATCGGCGACTCCACCTTCTTCCATTCCGGCATCACCGGCCTTTTGAGCATGTC CTACAACGCGGGGAACGCCCTGGTCATCATCATGGACAACCGCACCACCGGCATGACCGGCGGCCAGGAAAACCCCGGTT CCGGGAGGCATATCCAGGGCAATCCGGCAAAAGAGGTGGACATGGTGTCGCTCGTGAAGGTGCTGGGAATCGAAAACGTC TTCGAGATCAACTCCTACGACTTGAAGGAGACAGAGGCCGCCATCAGGCGCGGGTTGGAGACGCCTGGCCCCTACGTCCT CGTGGACAAAAACCCCTGCGTTCTGCGCTACCGGGTGAAAAAGCCGCTGGTTCAGGTCTCGGCCGAGAAATGCACCGGTT GCCGCGCCTGCCTCAAGGCCTCCTGCGTCGCCCTGGGACTCAAGGGCTCGGGAGAGAAGCCGAAGGTCTCCATCGACCCC AACATCTGCAACGGATGCGGGGTATGCAGCCAGCATTGTAAATTCGACGCCATGACCGTCGCAAGCGGAGGGAGCCATGA AAGCATTTAA
Upstream 100 bases:
>100_bases ACTCAGGTACATCTAAAAACCGGACGGGCAGGTGCAGCGCCGCCTGCCCGTCCACCGCACAGCCAGCCGATACGGCCAAC GCGATAAAGGAACCTCAACC
Downstream 100 bases:
>100_bases CATCGTCATTGCCGGGGTAGGGGGGCAGGGGGTGCTGATGGCTTCCAAGGTGCTGGCCGAAAGCGCTCTGGCTAGCAGCA TGGACGTAAAGCAAAACGAG
Product: indolepyruvate ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MKKIISGNEAIALSFEDSGGVFASGYPGTPSTETLEEVARLGNVYCEWAPNEKVGLESAIGASLAGGRALATMKHVGVNV AADALMTLTYTGVNAGLILMAADDPGMHSSQNEQDSRNYAKFAKIPMLDPADSQEAYDYVRAGFEISERFDTPVMLRTTT RISHAKGVVEQKGKVAAKVGELAKDVPKYVMLPNFGKIKHVAVEERLLKLQAFAEESPLNRVEMNDPELGIITSGISYQH AKEAFPQASFLKLGLVHPLPEQKIRDFASKVGRLMVVEEMDAIFEEQIRAMGIRVDIGKDRISLCGEVCADIVREAAGAP ATSAKTTPAGDLPLRPPTFCPGCAHRGLYSILSKLKVFVSGDIGCYTLGALPPLSAMHTCICMGASISAAHGIAKVNEIA GRTEKPVAVIGDSTFFHSGITGLLSMSYNAGNALVIIMDNRTTGMTGGQENPGSGRHIQGNPAKEVDMVSLVKVLGIENV FEINSYDLKETEAAIRRGLETPGPYVLVDKNPCVLRYRVKKPLVQVSAEKCTGCRACLKASCVALGLKGSGEKPKVSIDP NICNGCGVCSQHCKFDAMTVASGGSHESI
Sequences:
>Translated_589_residues MKKIISGNEAIALSFEDSGGVFASGYPGTPSTETLEEVARLGNVYCEWAPNEKVGLESAIGASLAGGRALATMKHVGVNV AADALMTLTYTGVNAGLILMAADDPGMHSSQNEQDSRNYAKFAKIPMLDPADSQEAYDYVRAGFEISERFDTPVMLRTTT RISHAKGVVEQKGKVAAKVGELAKDVPKYVMLPNFGKIKHVAVEERLLKLQAFAEESPLNRVEMNDPELGIITSGISYQH AKEAFPQASFLKLGLVHPLPEQKIRDFASKVGRLMVVEEMDAIFEEQIRAMGIRVDIGKDRISLCGEVCADIVREAAGAP ATSAKTTPAGDLPLRPPTFCPGCAHRGLYSILSKLKVFVSGDIGCYTLGALPPLSAMHTCICMGASISAAHGIAKVNEIA GRTEKPVAVIGDSTFFHSGITGLLSMSYNAGNALVIIMDNRTTGMTGGQENPGSGRHIQGNPAKEVDMVSLVKVLGIENV FEINSYDLKETEAAIRRGLETPGPYVLVDKNPCVLRYRVKKPLVQVSAEKCTGCRACLKASCVALGLKGSGEKPKVSIDP NICNGCGVCSQHCKFDAMTVASGGSHESI >Mature_589_residues MKKIISGNEAIALSFEDSGGVFASGYPGTPSTETLEEVARLGNVYCEWAPNEKVGLESAIGASLAGGRALATMKHVGVNV AADALMTLTYTGVNAGLILMAADDPGMHSSQNEQDSRNYAKFAKIPMLDPADSQEAYDYVRAGFEISERFDTPVMLRTTT RISHAKGVVEQKGKVAAKVGELAKDVPKYVMLPNFGKIKHVAVEERLLKLQAFAEESPLNRVEMNDPELGIITSGISYQH AKEAFPQASFLKLGLVHPLPEQKIRDFASKVGRLMVVEEMDAIFEEQIRAMGIRVDIGKDRISLCGEVCADIVREAAGAP ATSAKTTPAGDLPLRPPTFCPGCAHRGLYSILSKLKVFVSGDIGCYTLGALPPLSAMHTCICMGASISAAHGIAKVNEIA GRTEKPVAVIGDSTFFHSGITGLLSMSYNAGNALVIIMDNRTTGMTGGQENPGSGRHIQGNPAKEVDMVSLVKVLGIENV FEINSYDLKETEAAIRRGLETPGPYVLVDKNPCVLRYRVKKPLVQVSAEKCTGCRACLKASCVALGLKGSGEKPKVSIDP NICNGCGVCSQHCKFDAMTVASGGSHESI
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 62709; Mature: 62709
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIISGNEAIALSFEDSGGVFASGYPGTPSTETLEEVARLGNVYCEWAPNEKVGLESAI CCCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHH GASLAGGRALATMKHVGVNVAADALMTLTYTGVNAGLILMAADDPGMHSSQNEQDSRNYA CCCCCCCHHHHHHHHCCCHHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHH KFAKIPMLDPADSQEAYDYVRAGFEISERFDTPVMLRTTTRISHAKGVVEQKGKVAAKVG HHHCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHH ELAKDVPKYVMLPNFGKIKHVAVEERLLKLQAFAEESPLNRVEMNDPELGIITSGISYQH HHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCHHH AKEAFPQASFLKLGLVHPLPEQKIRDFASKVGRLMVVEEMDAIFEEQIRAMGIRVDIGKD HHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCEEEECCCH RISLCGEVCADIVREAAGAPATSAKTTPAGDLPLRPPTFCPGCAHRGLYSILSKLKVFVS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEC GDIGCYTLGALPPLSAMHTCICMGASISAAHGIAKVNEIAGRTEKPVAVIGDSTFFHSGI CCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH TGLLSMSYNAGNALVIIMDNRTTGMTGGQENPGSGRHIQGNPAKEVDMVSLVKVLGIENV HHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCE FEINSYDLKETEAAIRRGLETPGPYVLVDKNPCVLRYRVKKPLVQVSAEKCTGCRACLKA EECCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH SCVALGLKGSGEKPKVSIDPNICNGCGVCSQHCKFDAMTVASGGSHESI HHHEEECCCCCCCCEEEECCCCCCCCCHHHHHCCCCEEEEECCCCCCCC >Mature Secondary Structure MKKIISGNEAIALSFEDSGGVFASGYPGTPSTETLEEVARLGNVYCEWAPNEKVGLESAI CCCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHH GASLAGGRALATMKHVGVNVAADALMTLTYTGVNAGLILMAADDPGMHSSQNEQDSRNYA CCCCCCCHHHHHHHHCCCHHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHH KFAKIPMLDPADSQEAYDYVRAGFEISERFDTPVMLRTTTRISHAKGVVEQKGKVAAKVG HHHCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHH ELAKDVPKYVMLPNFGKIKHVAVEERLLKLQAFAEESPLNRVEMNDPELGIITSGISYQH HHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCHHH AKEAFPQASFLKLGLVHPLPEQKIRDFASKVGRLMVVEEMDAIFEEQIRAMGIRVDIGKD HHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCEEEECCCH RISLCGEVCADIVREAAGAPATSAKTTPAGDLPLRPPTFCPGCAHRGLYSILSKLKVFVS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEC GDIGCYTLGALPPLSAMHTCICMGASISAAHGIAKVNEIAGRTEKPVAVIGDSTFFHSGI CCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH TGLLSMSYNAGNALVIIMDNRTTGMTGGQENPGSGRHIQGNPAKEVDMVSLVKVLGIENV HHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCE FEINSYDLKETEAAIRRGLETPGPYVLVDKNPCVLRYRVKKPLVQVSAEKCTGCRACLKA EECCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH SCVALGLKGSGEKPKVSIDPNICNGCGVCSQHCKFDAMTVASGGSHESI HHHEEECCCCCCCCEEEECCCCCCCCCHHHHHCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]