Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is iorA-2 [H]

Identifier: 197117807

GI number: 197117807

Start: 1636368

End: 1638137

Strand: Direct

Name: iorA-2 [H]

Synonym: Gbem_1419

Alternate gene names: 197117807

Gene position: 1636368-1638137 (Clockwise)

Preceding gene: 197117806

Following gene: 197117808

Centisome position: 35.46

GC content: 63.5

Gene sequence:

>1770_bases
ATGAAAAAGATAATCTCCGGCAACGAAGCGATTGCCTTGAGCTTTGAAGATTCCGGCGGCGTCTTCGCCTCCGGCTATCC
CGGCACGCCCAGCACAGAAACGCTGGAAGAGGTCGCCCGCCTGGGAAACGTGTACTGCGAATGGGCCCCGAACGAAAAGG
TCGGGCTGGAATCGGCCATCGGCGCCTCCCTTGCGGGCGGCAGGGCGCTCGCCACCATGAAGCACGTGGGGGTGAACGTC
GCGGCCGACGCGTTGATGACCCTCACCTATACCGGGGTGAACGCGGGCCTCATCCTGATGGCGGCCGACGACCCGGGGAT
GCACTCCTCCCAGAACGAGCAGGACAGCCGCAACTACGCGAAGTTCGCCAAGATCCCGATGCTCGACCCCGCCGATTCCC
AGGAGGCCTACGACTACGTCCGGGCCGGGTTCGAGATCTCGGAGCGCTTCGACACCCCGGTTATGCTGCGCACCACCACC
CGGATCTCACACGCGAAGGGGGTCGTGGAGCAGAAGGGGAAGGTAGCGGCGAAGGTGGGAGAGCTGGCGAAGGACGTGCC
GAAGTACGTGATGCTTCCCAACTTCGGGAAGATCAAGCACGTCGCGGTCGAGGAGCGGCTCTTGAAGCTGCAGGCCTTCG
CGGAGGAGTCTCCGCTTAACCGGGTGGAGATGAACGACCCCGAACTGGGGATCATCACCTCCGGCATCTCCTACCAGCAC
GCGAAAGAAGCGTTCCCGCAGGCCTCCTTCCTGAAGCTCGGGCTGGTGCACCCGCTGCCGGAGCAAAAGATCCGCGACTT
CGCCTCCAAGGTGGGGCGGCTCATGGTGGTGGAGGAGATGGACGCCATCTTCGAGGAGCAGATCCGCGCCATGGGGATCC
GGGTCGACATAGGCAAGGACCGCATCTCGCTTTGCGGCGAGGTCTGCGCCGACATCGTCCGCGAGGCTGCCGGCGCCCCG
GCCACCTCCGCGAAGACTACGCCTGCGGGCGACCTCCCCCTGCGCCCCCCGACCTTCTGCCCCGGCTGCGCCCACCGCGG
CCTTTATTCCATCCTGAGCAAGCTGAAGGTCTTCGTATCCGGAGACATCGGCTGCTACACCCTGGGCGCGCTCCCTCCCT
TGAGCGCCATGCATACCTGCATCTGCATGGGGGCCAGCATCAGCGCTGCCCACGGCATCGCCAAGGTGAACGAGATCGCG
GGGAGGACCGAAAAACCGGTGGCCGTCATCGGCGACTCCACCTTCTTCCATTCCGGCATCACCGGCCTTTTGAGCATGTC
CTACAACGCGGGGAACGCCCTGGTCATCATCATGGACAACCGCACCACCGGCATGACCGGCGGCCAGGAAAACCCCGGTT
CCGGGAGGCATATCCAGGGCAATCCGGCAAAAGAGGTGGACATGGTGTCGCTCGTGAAGGTGCTGGGAATCGAAAACGTC
TTCGAGATCAACTCCTACGACTTGAAGGAGACAGAGGCCGCCATCAGGCGCGGGTTGGAGACGCCTGGCCCCTACGTCCT
CGTGGACAAAAACCCCTGCGTTCTGCGCTACCGGGTGAAAAAGCCGCTGGTTCAGGTCTCGGCCGAGAAATGCACCGGTT
GCCGCGCCTGCCTCAAGGCCTCCTGCGTCGCCCTGGGACTCAAGGGCTCGGGAGAGAAGCCGAAGGTCTCCATCGACCCC
AACATCTGCAACGGATGCGGGGTATGCAGCCAGCATTGTAAATTCGACGCCATGACCGTCGCAAGCGGAGGGAGCCATGA
AAGCATTTAA

Upstream 100 bases:

>100_bases
ACTCAGGTACATCTAAAAACCGGACGGGCAGGTGCAGCGCCGCCTGCCCGTCCACCGCACAGCCAGCCGATACGGCCAAC
GCGATAAAGGAACCTCAACC

Downstream 100 bases:

>100_bases
CATCGTCATTGCCGGGGTAGGGGGGCAGGGGGTGCTGATGGCTTCCAAGGTGCTGGCCGAAAGCGCTCTGGCTAGCAGCA
TGGACGTAAAGCAAAACGAG

Product: indolepyruvate ferredoxin oxidoreductase subunit alpha

Products: NA

Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MKKIISGNEAIALSFEDSGGVFASGYPGTPSTETLEEVARLGNVYCEWAPNEKVGLESAIGASLAGGRALATMKHVGVNV
AADALMTLTYTGVNAGLILMAADDPGMHSSQNEQDSRNYAKFAKIPMLDPADSQEAYDYVRAGFEISERFDTPVMLRTTT
RISHAKGVVEQKGKVAAKVGELAKDVPKYVMLPNFGKIKHVAVEERLLKLQAFAEESPLNRVEMNDPELGIITSGISYQH
AKEAFPQASFLKLGLVHPLPEQKIRDFASKVGRLMVVEEMDAIFEEQIRAMGIRVDIGKDRISLCGEVCADIVREAAGAP
ATSAKTTPAGDLPLRPPTFCPGCAHRGLYSILSKLKVFVSGDIGCYTLGALPPLSAMHTCICMGASISAAHGIAKVNEIA
GRTEKPVAVIGDSTFFHSGITGLLSMSYNAGNALVIIMDNRTTGMTGGQENPGSGRHIQGNPAKEVDMVSLVKVLGIENV
FEINSYDLKETEAAIRRGLETPGPYVLVDKNPCVLRYRVKKPLVQVSAEKCTGCRACLKASCVALGLKGSGEKPKVSIDP
NICNGCGVCSQHCKFDAMTVASGGSHESI

Sequences:

>Translated_589_residues
MKKIISGNEAIALSFEDSGGVFASGYPGTPSTETLEEVARLGNVYCEWAPNEKVGLESAIGASLAGGRALATMKHVGVNV
AADALMTLTYTGVNAGLILMAADDPGMHSSQNEQDSRNYAKFAKIPMLDPADSQEAYDYVRAGFEISERFDTPVMLRTTT
RISHAKGVVEQKGKVAAKVGELAKDVPKYVMLPNFGKIKHVAVEERLLKLQAFAEESPLNRVEMNDPELGIITSGISYQH
AKEAFPQASFLKLGLVHPLPEQKIRDFASKVGRLMVVEEMDAIFEEQIRAMGIRVDIGKDRISLCGEVCADIVREAAGAP
ATSAKTTPAGDLPLRPPTFCPGCAHRGLYSILSKLKVFVSGDIGCYTLGALPPLSAMHTCICMGASISAAHGIAKVNEIA
GRTEKPVAVIGDSTFFHSGITGLLSMSYNAGNALVIIMDNRTTGMTGGQENPGSGRHIQGNPAKEVDMVSLVKVLGIENV
FEINSYDLKETEAAIRRGLETPGPYVLVDKNPCVLRYRVKKPLVQVSAEKCTGCRACLKASCVALGLKGSGEKPKVSIDP
NICNGCGVCSQHCKFDAMTVASGGSHESI
>Mature_589_residues
MKKIISGNEAIALSFEDSGGVFASGYPGTPSTETLEEVARLGNVYCEWAPNEKVGLESAIGASLAGGRALATMKHVGVNV
AADALMTLTYTGVNAGLILMAADDPGMHSSQNEQDSRNYAKFAKIPMLDPADSQEAYDYVRAGFEISERFDTPVMLRTTT
RISHAKGVVEQKGKVAAKVGELAKDVPKYVMLPNFGKIKHVAVEERLLKLQAFAEESPLNRVEMNDPELGIITSGISYQH
AKEAFPQASFLKLGLVHPLPEQKIRDFASKVGRLMVVEEMDAIFEEQIRAMGIRVDIGKDRISLCGEVCADIVREAAGAP
ATSAKTTPAGDLPLRPPTFCPGCAHRGLYSILSKLKVFVSGDIGCYTLGALPPLSAMHTCICMGASISAAHGIAKVNEIA
GRTEKPVAVIGDSTFFHSGITGLLSMSYNAGNALVIIMDNRTTGMTGGQENPGSGRHIQGNPAKEVDMVSLVKVLGIENV
FEINSYDLKETEAAIRRGLETPGPYVLVDKNPCVLRYRVKKPLVQVSAEKCTGCRACLKASCVALGLKGSGEKPKVSIDP
NICNGCGVCSQHCKFDAMTVASGGSHESI

Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]

COG id: COG4231

COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017721
- InterPro:   IPR002880
- InterPro:   IPR011766
- InterPro:   IPR009014
- InterPro:   IPR015941 [H]

Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.8 [H]

Molecular weight: Translated: 62709; Mature: 62709

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIISGNEAIALSFEDSGGVFASGYPGTPSTETLEEVARLGNVYCEWAPNEKVGLESAI
CCCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHH
GASLAGGRALATMKHVGVNVAADALMTLTYTGVNAGLILMAADDPGMHSSQNEQDSRNYA
CCCCCCCHHHHHHHHCCCHHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHH
KFAKIPMLDPADSQEAYDYVRAGFEISERFDTPVMLRTTTRISHAKGVVEQKGKVAAKVG
HHHCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHH
ELAKDVPKYVMLPNFGKIKHVAVEERLLKLQAFAEESPLNRVEMNDPELGIITSGISYQH
HHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCHHH
AKEAFPQASFLKLGLVHPLPEQKIRDFASKVGRLMVVEEMDAIFEEQIRAMGIRVDIGKD
HHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCEEEECCCH
RISLCGEVCADIVREAAGAPATSAKTTPAGDLPLRPPTFCPGCAHRGLYSILSKLKVFVS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEC
GDIGCYTLGALPPLSAMHTCICMGASISAAHGIAKVNEIAGRTEKPVAVIGDSTFFHSGI
CCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH
TGLLSMSYNAGNALVIIMDNRTTGMTGGQENPGSGRHIQGNPAKEVDMVSLVKVLGIENV
HHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCE
FEINSYDLKETEAAIRRGLETPGPYVLVDKNPCVLRYRVKKPLVQVSAEKCTGCRACLKA
EECCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
SCVALGLKGSGEKPKVSIDPNICNGCGVCSQHCKFDAMTVASGGSHESI
HHHEEECCCCCCCCEEEECCCCCCCCCHHHHHCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MKKIISGNEAIALSFEDSGGVFASGYPGTPSTETLEEVARLGNVYCEWAPNEKVGLESAI
CCCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHH
GASLAGGRALATMKHVGVNVAADALMTLTYTGVNAGLILMAADDPGMHSSQNEQDSRNYA
CCCCCCCHHHHHHHHCCCHHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHH
KFAKIPMLDPADSQEAYDYVRAGFEISERFDTPVMLRTTTRISHAKGVVEQKGKVAAKVG
HHHCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHH
ELAKDVPKYVMLPNFGKIKHVAVEERLLKLQAFAEESPLNRVEMNDPELGIITSGISYQH
HHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCHHH
AKEAFPQASFLKLGLVHPLPEQKIRDFASKVGRLMVVEEMDAIFEEQIRAMGIRVDIGKD
HHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCEEEECCCH
RISLCGEVCADIVREAAGAPATSAKTTPAGDLPLRPPTFCPGCAHRGLYSILSKLKVFVS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEC
GDIGCYTLGALPPLSAMHTCICMGASISAAHGIAKVNEIAGRTEKPVAVIGDSTFFHSGI
CCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH
TGLLSMSYNAGNALVIIMDNRTTGMTGGQENPGSGRHIQGNPAKEVDMVSLVKVLGIENV
HHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCE
FEINSYDLKETEAAIRRGLETPGPYVLVDKNPCVLRYRVKKPLVQVSAEKCTGCRACLKA
EECCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
SCVALGLKGSGEKPKVSIDPNICNGCGVCSQHCKFDAMTVASGGSHESI
HHHEEECCCCCCCCEEEECCCCCCCCCHHHHHCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]