| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is iorB-2 [H]
Identifier: 197117808
GI number: 197117808
Start: 1638124
End: 1638699
Strand: Direct
Name: iorB-2 [H]
Synonym: Gbem_1420
Alternate gene names: 197117808
Gene position: 1638124-1638699 (Clockwise)
Preceding gene: 197117807
Following gene: 197117809
Centisome position: 35.49
GC content: 63.89
Gene sequence:
>576_bases ATGAAAGCATTTAACATCGTCATTGCCGGGGTAGGGGGGCAGGGGGTGCTGATGGCTTCCAAGGTGCTGGCCGAAAGCGC TCTGGCTAGCAGCATGGACGTAAAGCAAAACGAGGTTCACGGCATGGCGCAAAGGGGCGGGAGCGTCATCTCCTTCGTCC GCATCGGCGCCAAGGTGCACTCGCCGGTGGTGCTTCCGGGCACCGCCGACATCCTCATCTCCTTCGAGCCTTTGGAGGCG CTGCGCTACCTGCACTACCTGAAGCCCGGCGGCAAGCTCGTCTACAACAAGGCGTGCATCAACCCGAGTACGGTGGCGGC GGGTCTTGCCACCTATCCCGGCGACGTCGCGCAGCGGATAACAGCGGCCTGCCCCGACGCCAGGGCGATAGATGCGCTGC AGGTGGCGAAAGAAGCCGGAAACGCCAAGGCGGTGAACATGGTCATGGTCGGCTCGGTCATGAAGGGGCTCCCCATTGAC TCGGAGGTTGTGGAGGGCGTGGTCAGGGAGATATCCCGCGGCAAGGGTGAGGACGTCAACATGGCCGCGCTGCGCGGAGG AGCCGCTACGGCCTGA
Upstream 100 bases:
>100_bases AAGCCGAAGGTCTCCATCGACCCCAACATCTGCAACGGATGCGGGGTATGCAGCCAGCATTGTAAATTCGACGCCATGAC CGTCGCAAGCGGAGGGAGCC
Downstream 100 bases:
>100_bases TTCCGTGTGCGGTAGGGAGGGGGACAGGCACCTGGCGGAGCCAGTCCACCCGCGGCGCCAACATAGAAAGATGGAGGCAT CCATGAAACTGAAACAGCTG
Product: indolepyruvate ferredoxin oxidoreductase subunit beta
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKAFNIVIAGVGGQGVLMASKVLAESALASSMDVKQNEVHGMAQRGGSVISFVRIGAKVHSPVVLPGTADILISFEPLEA LRYLHYLKPGGKLVYNKACINPSTVAAGLATYPGDVAQRITAACPDARAIDALQVAKEAGNAKAVNMVMVGSVMKGLPID SEVVEGVVREISRGKGEDVNMAALRGGAATA
Sequences:
>Translated_191_residues MKAFNIVIAGVGGQGVLMASKVLAESALASSMDVKQNEVHGMAQRGGSVISFVRIGAKVHSPVVLPGTADILISFEPLEA LRYLHYLKPGGKLVYNKACINPSTVAAGLATYPGDVAQRITAACPDARAIDALQVAKEAGNAKAVNMVMVGSVMKGLPID SEVVEGVVREISRGKGEDVNMAALRGGAATA >Mature_191_residues MKAFNIVIAGVGGQGVLMASKVLAESALASSMDVKQNEVHGMAQRGGSVISFVRIGAKVHSPVVLPGTADILISFEPLEA LRYLHYLKPGGKLVYNKACINPSTVAAGLATYPGDVAQRITAACPDARAIDALQVAKEAGNAKAVNMVMVGSVMKGLPID SEVVEGVVREISRGKGEDVNMAALRGGAATA
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG1014
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017719 - InterPro: IPR019752 - InterPro: IPR002869 [H]
Pfam domain/function: PF01558 POR [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 19641; Mature: 19641
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFNIVIAGVGGQGVLMASKVLAESALASSMDVKQNEVHGMAQRGGSVISFVRIGAKVH CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHHHC SPVVLPGTADILISFEPLEALRYLHYLKPGGKLVYNKACINPSTVAAGLATYPGDVAQRI CCEEECCCCEEEEEECHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHH TAACPDARAIDALQVAKEAGNAKAVNMVMVGSVMKGLPIDSEVVEGVVREISRGKGEDVN HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC MAALRGGAATA CEEECCCCCCC >Mature Secondary Structure MKAFNIVIAGVGGQGVLMASKVLAESALASSMDVKQNEVHGMAQRGGSVISFVRIGAKVH CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHHHC SPVVLPGTADILISFEPLEALRYLHYLKPGGKLVYNKACINPSTVAAGLATYPGDVAQRI CCEEECCCCEEEEEECHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHH TAACPDARAIDALQVAKEAGNAKAVNMVMVGSVMKGLPIDSEVVEGVVREISRGKGEDVN HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC MAALRGGAATA CEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]