Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is iorB-2 [H]

Identifier: 197117808

GI number: 197117808

Start: 1638124

End: 1638699

Strand: Direct

Name: iorB-2 [H]

Synonym: Gbem_1420

Alternate gene names: 197117808

Gene position: 1638124-1638699 (Clockwise)

Preceding gene: 197117807

Following gene: 197117809

Centisome position: 35.49

GC content: 63.89

Gene sequence:

>576_bases
ATGAAAGCATTTAACATCGTCATTGCCGGGGTAGGGGGGCAGGGGGTGCTGATGGCTTCCAAGGTGCTGGCCGAAAGCGC
TCTGGCTAGCAGCATGGACGTAAAGCAAAACGAGGTTCACGGCATGGCGCAAAGGGGCGGGAGCGTCATCTCCTTCGTCC
GCATCGGCGCCAAGGTGCACTCGCCGGTGGTGCTTCCGGGCACCGCCGACATCCTCATCTCCTTCGAGCCTTTGGAGGCG
CTGCGCTACCTGCACTACCTGAAGCCCGGCGGCAAGCTCGTCTACAACAAGGCGTGCATCAACCCGAGTACGGTGGCGGC
GGGTCTTGCCACCTATCCCGGCGACGTCGCGCAGCGGATAACAGCGGCCTGCCCCGACGCCAGGGCGATAGATGCGCTGC
AGGTGGCGAAAGAAGCCGGAAACGCCAAGGCGGTGAACATGGTCATGGTCGGCTCGGTCATGAAGGGGCTCCCCATTGAC
TCGGAGGTTGTGGAGGGCGTGGTCAGGGAGATATCCCGCGGCAAGGGTGAGGACGTCAACATGGCCGCGCTGCGCGGAGG
AGCCGCTACGGCCTGA

Upstream 100 bases:

>100_bases
AAGCCGAAGGTCTCCATCGACCCCAACATCTGCAACGGATGCGGGGTATGCAGCCAGCATTGTAAATTCGACGCCATGAC
CGTCGCAAGCGGAGGGAGCC

Downstream 100 bases:

>100_bases
TTCCGTGTGCGGTAGGGAGGGGGACAGGCACCTGGCGGAGCCAGTCCACCCGCGGCGCCAACATAGAAAGATGGAGGCAT
CCATGAAACTGAAACAGCTG

Product: indolepyruvate ferredoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKAFNIVIAGVGGQGVLMASKVLAESALASSMDVKQNEVHGMAQRGGSVISFVRIGAKVHSPVVLPGTADILISFEPLEA
LRYLHYLKPGGKLVYNKACINPSTVAAGLATYPGDVAQRITAACPDARAIDALQVAKEAGNAKAVNMVMVGSVMKGLPID
SEVVEGVVREISRGKGEDVNMAALRGGAATA

Sequences:

>Translated_191_residues
MKAFNIVIAGVGGQGVLMASKVLAESALASSMDVKQNEVHGMAQRGGSVISFVRIGAKVHSPVVLPGTADILISFEPLEA
LRYLHYLKPGGKLVYNKACINPSTVAAGLATYPGDVAQRITAACPDARAIDALQVAKEAGNAKAVNMVMVGSVMKGLPID
SEVVEGVVREISRGKGEDVNMAALRGGAATA
>Mature_191_residues
MKAFNIVIAGVGGQGVLMASKVLAESALASSMDVKQNEVHGMAQRGGSVISFVRIGAKVHSPVVLPGTADILISFEPLEA
LRYLHYLKPGGKLVYNKACINPSTVAAGLATYPGDVAQRITAACPDARAIDALQVAKEAGNAKAVNMVMVGSVMKGLPID
SEVVEGVVREISRGKGEDVNMAALRGGAATA

Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]

COG id: COG1014

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017719
- InterPro:   IPR019752
- InterPro:   IPR002869 [H]

Pfam domain/function: PF01558 POR [H]

EC number: =1.2.7.8 [H]

Molecular weight: Translated: 19641; Mature: 19641

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFNIVIAGVGGQGVLMASKVLAESALASSMDVKQNEVHGMAQRGGSVISFVRIGAKVH
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHHHC
SPVVLPGTADILISFEPLEALRYLHYLKPGGKLVYNKACINPSTVAAGLATYPGDVAQRI
CCEEECCCCEEEEEECHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHH
TAACPDARAIDALQVAKEAGNAKAVNMVMVGSVMKGLPIDSEVVEGVVREISRGKGEDVN
HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC
MAALRGGAATA
CEEECCCCCCC
>Mature Secondary Structure
MKAFNIVIAGVGGQGVLMASKVLAESALASSMDVKQNEVHGMAQRGGSVISFVRIGAKVH
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHHHC
SPVVLPGTADILISFEPLEALRYLHYLKPGGKLVYNKACINPSTVAAGLATYPGDVAQRI
CCEEECCCCEEEEEECHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHH
TAACPDARAIDALQVAKEAGNAKAVNMVMVGSVMKGLPIDSEVVEGVVREISRGKGEDVN
HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC
MAALRGGAATA
CEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]