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The map label for this gene is kdpE-1 [H]

Identifier: 197117560

GI number: 197117560

Start: 1364086

End: 1364793

Strand: Direct

Name: kdpE-1 [H]

Synonym: Gbem_1172

Alternate gene names: 197117560

Gene position: 1364086-1364793 (Clockwise)

Preceding gene: 197117559

Following gene: 197117561

Centisome position: 29.56

GC content: 65.4

Gene sequence:

>708_bases
ATGAAAGAGAGCCAAGAGGCGACCGGGCAGCGCATACTCGTCATCGACGACGAGGCGGCCATTCGCCGCTTCCTGCATTC
CGCGCTGTCCTCGGATGAATTCATCCTCCACGAGGCCGATTCCGGGCACGGCGGGCTATCAGCCGCCGCGGCCTTGAGGC
CCGACCTGATCCTATTGGACCTGGGGCTTCCCGACCTGGAGGGTATCGAGGTGATCCGCCGTATCCGCGAGTGGTCCCAG
GTCCCCATCATCGTCCTCTCGGTGCGCGAGCGTGAGGACGACAAGGTGGCGGCTCTCGACGCCGGGGCCGACGACTACCT
CACCAAGCCCTTCGGGGTGGGGGAACTGCTGGCCCGCATGAGGGCCTCCCTGCGCCGTTCCGCGGTGCAGCTCTCCGAGC
CGGTCTTCTCAAGCGGCGACCTTACGGTGGACCTGAACCTGCGCCGGGTGACGGTGGAGGGAGCCGAGGTCCAGTTGACG
CCCACCGAGTACGACCTCTTGCGCCTGCTCATCACCCACGCGGACAAGGTCATAACCCACAGCCAGATCCTGAAGCAGAT
CTGGGGGGTGGCGTACCAGGATCAGCCCCAGGTGCTCAGGGTTACCATCAGCAACCTGAGGAAGAAGGTCGAGCGGGACC
CCTCGCGCCCCAGGCACATCACCACCGAACCCGGGGTCGGGTATCGGTTCAAGCAGGTGCAACCATGA

Upstream 100 bases:

>100_bases
TCGTGGAGGCGCACGGGGGAAGGATCGCGGCCAGGAACCGCCCGCAGGGGGGGCTCGCGGTCGAGATCCTTTTGCCGTTG
CAGCAAGGAGCAGAGGAGCC

Downstream 100 bases:

>100_bases
ATAACGAAGCGCCCCAATCCTACTGGAGCGGCATCGTCAAGGCGATGGGGCTCGTCTTCGGGGACATCGGCACCAGCCCG
ATCTACACCCTCACCGTCAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKESQEATGQRILVIDDEAAIRRFLHSALSSDEFILHEADSGHGGLSAAAALRPDLILLDLGLPDLEGIEVIRRIREWSQ
VPIIVLSVREREDDKVAALDAGADDYLTKPFGVGELLARMRASLRRSAVQLSEPVFSSGDLTVDLNLRRVTVEGAEVQLT
PTEYDLLRLLITHADKVITHSQILKQIWGVAYQDQPQVLRVTISNLRKKVERDPSRPRHITTEPGVGYRFKQVQP

Sequences:

>Translated_235_residues
MKESQEATGQRILVIDDEAAIRRFLHSALSSDEFILHEADSGHGGLSAAAALRPDLILLDLGLPDLEGIEVIRRIREWSQ
VPIIVLSVREREDDKVAALDAGADDYLTKPFGVGELLARMRASLRRSAVQLSEPVFSSGDLTVDLNLRRVTVEGAEVQLT
PTEYDLLRLLITHADKVITHSQILKQIWGVAYQDQPQVLRVTISNLRKKVERDPSRPRHITTEPGVGYRFKQVQP
>Mature_235_residues
MKESQEATGQRILVIDDEAAIRRFLHSALSSDEFILHEADSGHGGLSAAAALRPDLILLDLGLPDLEGIEVIRRIREWSQ
VPIIVLSVREREDDKVAALDAGADDYLTKPFGVGELLARMRASLRRSAVQLSEPVFSSGDLTVDLNLRRVTVEGAEVQLT
PTEYDLLRLLITHADKVITHSQILKQIWGVAYQDQPQVLRVTISNLRKKVERDPSRPRHITTEPGVGYRFKQVQP

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=220, Percent_Identity=53.1818181818182, Blast_Score=233, Evalue=7e-63,
Organism=Escherichia coli, GI1786784, Length=220, Percent_Identity=36.3636363636364, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=35.5555555555556, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI87082012, Length=224, Percent_Identity=35.2678571428571, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=33.920704845815, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1787375, Length=226, Percent_Identity=35.8407079646018, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1790552, Length=219, Percent_Identity=34.703196347032, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=31.0810810810811, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789402, Length=219, Percent_Identity=31.9634703196347, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=29.5154185022026, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=28.125, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=29.5652173913043, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=29.004329004329, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=28.3185840707965, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=35.1851851851852, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790299, Length=108, Percent_Identity=31.4814814814815, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1787487, Length=149, Percent_Identity=30.8724832214765, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1787473, Length=162, Percent_Identity=37.6543209876543, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26269; Mature: 26269

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKESQEATGQRILVIDDEAAIRRFLHSALSSDEFILHEADSGHGGLSAAAALRPDLILLD
CCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCEEEEE
LGLPDLEGIEVIRRIREWSQVPIIVLSVREREDDKVAALDAGADDYLTKPFGVGELLARM
CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCHHCCCCCCHHHHHHHH
RASLRRSAVQLSEPVFSSGDLTVDLNLRRVTVEGAEVQLTPTEYDLLRLLITHADKVITH
HHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHH
SQILKQIWGVAYQDQPQVLRVTISNLRKKVERDPSRPRHITTEPGVGYRFKQVQP
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEECCCCC
>Mature Secondary Structure
MKESQEATGQRILVIDDEAAIRRFLHSALSSDEFILHEADSGHGGLSAAAALRPDLILLD
CCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCEEEEE
LGLPDLEGIEVIRRIREWSQVPIIVLSVREREDDKVAALDAGADDYLTKPFGVGELLARM
CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCHHCCCCCCHHHHHHHH
RASLRRSAVQLSEPVFSSGDLTVDLNLRRVTVEGAEVQLTPTEYDLLRLLITHADKVITH
HHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHH
SQILKQIWGVAYQDQPQVLRVTISNLRKKVERDPSRPRHITTEPGVGYRFKQVQP
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1532388; 8905232; 9278503 [H]