| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is zraS [H]
Identifier: 197116682
GI number: 197116682
Start: 339633
End: 341117
Strand: Direct
Name: zraS [H]
Synonym: Gbem_0282
Alternate gene names: 197116682
Gene position: 339633-341117 (Clockwise)
Preceding gene: 197116681
Following gene: 197116683
Centisome position: 7.36
GC content: 62.22
Gene sequence:
>1485_bases GTGCTCTCCATCTGTCTGCTCGTCTTCGGTATCGGGACCTTCGCCTTCCTGACGCTTCGGCGCGAGCAGATGCAGCTCGT CAATTCCGCTCGCGAATCGAGCGAACTCCTCTTGAACACCATCGAACGCTCCCTCTACAACTCCATGAGGATCGGCAACA CCGAGGACGTGAAGGTGATCCTGGAGATGGTGGGGCAGAGCGAGAACCTGGTGGGGGTGCGCATCTTCCATCCCCACGGG GTCATCCTGAAGTCCTCCAACCCCAACGAGGTCGGGCGGGTGGTCGACGAGCGCGACTACAAGCTCTTCCTTGACAACAA GCGCGAAGGCGTCTTCAACCTTGACGGGCACGGCGAGGTGCTGGGGATGGTTAAGCCGATCTACAACGACCGTCAGTGCA ACCTCTGCCATGGTTCCAAGAGCCGGATCATCGGTCTTTTGAACGTCAATTACTCCCTGACCGAGACACGGAACCGGATC GTGGAACTGACCAAGCTCTTCGTGATGTCCACCGTCGCCATCATCGGCTTTCTCTCCCTTGCCATCTCGCTGGTCATGCT GAAGTTCGTCAAGAAGCCGTTAACCCAGCTTGCCAAGAACATGGCGCGCGTGGAGGCGGGGGATCTCTCGGTGCGCATGA CCCCCGAGGGGAAGGACGAAATCGGGCGCCTGATCGTCTCCTTCGACTCCATGGTGGATCGGCTGGACCGGGCCAAGAAG GAGCTGGAGAACTTCCATTTCCAGCAGATGGAGCGCGCCGACCGCCTCGCCTCGGTGGGAGAGATGGCCGCCGGCATCGC CCACGAGATCAAGAACCCGCTTACCGGCATCGCCGCCGCCATCACGGTGCTCAAAGACGACTTCGCCCCGGAAGACGGCC GCATCCAGATCATCGGCGAGGTGCTGGAGCAGATCTCCCGGCTGGACAAGACGGTGAACGACCTGCTCTTCTTCGGCAAG CCCACCGTCGCCGAGCCGACCTGCACCGACATCAACTCGGCGCTCAAAAAGATACTGGTCTTCGCCTCGCAGCACCGTGG CGGCAAGAACATCGAAAAGCGCCTGGAACTGTCCGAAAATCTCCCCACCGTCTATGTGGACCCGAAGCAGATCCAGCAGG TCTTCCTGAACCTGTTCCTGAACGCGGTCCAGGCGATGCAGGCTGGGGGGACGCTCACCGTGAAGAGCGGGCTGGCCAAG GTCGAGGGGGTCGACATGGTGCAGGTGCGGGTGACCGACACCGGCCAGGGGATTCCGCCGCAGATCCTGGAGAAGATCTT CACCCCGTTTTTCACCACCAAGGCGCAGGGGACCGGTCTCGGCCTCGCCATCAGCCACCGCCTCATCGAGCAGCACGGCG GGAGGCTTTCCGTGGTGAGCCAGGACGGAATGGGAACCACCTTCACCGTGGAACTCCCCGCCTACTGCCCCGGGCAGCCG GGGTACTCCGGGCCTGACGCGCCCCCCCCGACGGTGTGCCAGTAA
Upstream 100 bases:
>100_bases GCGCCCCCGTCCAATCCTGGAACCGGGGGCGTTGTGAAAAGATTCACCCACTCAACCGGAGGCACTCCTGATTTTCAAGA GTCTGACATCGCGGGTCATC
Downstream 100 bases:
>100_bases AGAGCGCCAGCAGAAACGACAACAACCGGTCCGCCACCGGATCAGTTGCAGCGGGAAATAACCTTAAGGAGCCGGAATGC GCAAGATAAAGATTATGGTC
Product: HAMP domain-containing sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MLSICLLVFGIGTFAFLTLRREQMQLVNSARESSELLLNTIERSLYNSMRIGNTEDVKVILEMVGQSENLVGVRIFHPHG VILKSSNPNEVGRVVDERDYKLFLDNKREGVFNLDGHGEVLGMVKPIYNDRQCNLCHGSKSRIIGLLNVNYSLTETRNRI VELTKLFVMSTVAIIGFLSLAISLVMLKFVKKPLTQLAKNMARVEAGDLSVRMTPEGKDEIGRLIVSFDSMVDRLDRAKK ELENFHFQQMERADRLASVGEMAAGIAHEIKNPLTGIAAAITVLKDDFAPEDGRIQIIGEVLEQISRLDKTVNDLLFFGK PTVAEPTCTDINSALKKILVFASQHRGGKNIEKRLELSENLPTVYVDPKQIQQVFLNLFLNAVQAMQAGGTLTVKSGLAK VEGVDMVQVRVTDTGQGIPPQILEKIFTPFFTTKAQGTGLGLAISHRLIEQHGGRLSVVSQDGMGTTFTVELPAYCPGQP GYSGPDAPPPTVCQ
Sequences:
>Translated_494_residues MLSICLLVFGIGTFAFLTLRREQMQLVNSARESSELLLNTIERSLYNSMRIGNTEDVKVILEMVGQSENLVGVRIFHPHG VILKSSNPNEVGRVVDERDYKLFLDNKREGVFNLDGHGEVLGMVKPIYNDRQCNLCHGSKSRIIGLLNVNYSLTETRNRI VELTKLFVMSTVAIIGFLSLAISLVMLKFVKKPLTQLAKNMARVEAGDLSVRMTPEGKDEIGRLIVSFDSMVDRLDRAKK ELENFHFQQMERADRLASVGEMAAGIAHEIKNPLTGIAAAITVLKDDFAPEDGRIQIIGEVLEQISRLDKTVNDLLFFGK PTVAEPTCTDINSALKKILVFASQHRGGKNIEKRLELSENLPTVYVDPKQIQQVFLNLFLNAVQAMQAGGTLTVKSGLAK VEGVDMVQVRVTDTGQGIPPQILEKIFTPFFTTKAQGTGLGLAISHRLIEQHGGRLSVVSQDGMGTTFTVELPAYCPGQP GYSGPDAPPPTVCQ >Mature_494_residues MLSICLLVFGIGTFAFLTLRREQMQLVNSARESSELLLNTIERSLYNSMRIGNTEDVKVILEMVGQSENLVGVRIFHPHG VILKSSNPNEVGRVVDERDYKLFLDNKREGVFNLDGHGEVLGMVKPIYNDRQCNLCHGSKSRIIGLLNVNYSLTETRNRI VELTKLFVMSTVAIIGFLSLAISLVMLKFVKKPLTQLAKNMARVEAGDLSVRMTPEGKDEIGRLIVSFDSMVDRLDRAKK ELENFHFQQMERADRLASVGEMAAGIAHEIKNPLTGIAAAITVLKDDFAPEDGRIQIIGEVLEQISRLDKTVNDLLFFGK PTVAEPTCTDINSALKKILVFASQHRGGKNIEKRLELSENLPTVYVDPKQIQQVFLNLFLNAVQAMQAGGTLTVKSGLAK VEGVDMVQVRVTDTGQGIPPQILEKIFTPFFTTKAQGTGLGLAISHRLIEQHGGRLSVVSQDGMGTTFTVELPAYCPGQP GYSGPDAPPPTVCQ
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=39.0041493775934, Blast_Score=178, Evalue=9e-46, Organism=Escherichia coli, GI1788549, Length=237, Percent_Identity=35.4430379746835, Blast_Score=143, Evalue=3e-35, Organism=Escherichia coli, GI1790300, Length=233, Percent_Identity=31.3304721030043, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1786783, Length=360, Percent_Identity=25.2777777777778, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1788393, Length=293, Percent_Identity=26.2798634812287, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87081816, Length=350, Percent_Identity=29.4285714285714, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI145693157, Length=267, Percent_Identity=30.7116104868914, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789149, Length=347, Percent_Identity=24.207492795389, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI48994928, Length=263, Percent_Identity=28.8973384030418, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1786912, Length=281, Percent_Identity=27.7580071174377, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790346, Length=303, Percent_Identity=24.7524752475248, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788713, Length=238, Percent_Identity=24.3697478991597, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1790861, Length=325, Percent_Identity=24, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1789808, Length=308, Percent_Identity=24.3506493506494, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082128, Length=223, Percent_Identity=25.5605381165919, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 54420; Mature: 54420
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSICLLVFGIGTFAFLTLRREQMQLVNSARESSELLLNTIERSLYNSMRIGNTEDVKVI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LEMVGQSENLVGVRIFHPHGVILKSSNPNEVGRVVDERDYKLFLDNKREGVFNLDGHGEV HHHHCCCCCEEEEEEECCCCEEEECCCCHHHHHHHCCCCCEEEEECCCCCEEEECCCCCH LGMVKPIYNDRQCNLCHGSKSRIIGLLNVNYSLTETRNRIVELTKLFVMSTVAIIGFLSL HHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AISLVMLKFVKKPLTQLAKNMARVEAGDLSVRMTPEGKDEIGRLIVSFDSMVDRLDRAKK HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH ELENFHFQQMERADRLASVGEMAAGIAHEIKNPLTGIAAAITVLKDDFAPEDGRIQIIGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEHHHH VLEQISRLDKTVNDLLFFGKPTVAEPTCTDINSALKKILVFASQHRGGKNIEKRLELSEN HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC LPTVYVDPKQIQQVFLNLFLNAVQAMQAGGTLTVKSGLAKVEGVDMVQVRVTDTGQGIPP CCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHCCCCEEEEEEEECCCCCCCH QILEKIFTPFFTTKAQGTGLGLAISHRLIEQHGGRLSVVSQDGMGTTFTVELPAYCPGQP HHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCC GYSGPDAPPPTVCQ CCCCCCCCCCCCCC >Mature Secondary Structure MLSICLLVFGIGTFAFLTLRREQMQLVNSARESSELLLNTIERSLYNSMRIGNTEDVKVI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LEMVGQSENLVGVRIFHPHGVILKSSNPNEVGRVVDERDYKLFLDNKREGVFNLDGHGEV HHHHCCCCCEEEEEEECCCCEEEECCCCHHHHHHHCCCCCEEEEECCCCCEEEECCCCCH LGMVKPIYNDRQCNLCHGSKSRIIGLLNVNYSLTETRNRIVELTKLFVMSTVAIIGFLSL HHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AISLVMLKFVKKPLTQLAKNMARVEAGDLSVRMTPEGKDEIGRLIVSFDSMVDRLDRAKK HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH ELENFHFQQMERADRLASVGEMAAGIAHEIKNPLTGIAAAITVLKDDFAPEDGRIQIIGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEHHHH VLEQISRLDKTVNDLLFFGKPTVAEPTCTDINSALKKILVFASQHRGGKNIEKRLELSEN HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC LPTVYVDPKQIQQVFLNLFLNAVQAMQAGGTLTVKSGLAKVEGVDMVQVRVTDTGQGIPP CCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHCCCCEEEEEEEECCCCCCCH QILEKIFTPFFTTKAQGTGLGLAISHRLIEQHGGRLSVVSQDGMGTTFTVELPAYCPGQP HHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCC GYSGPDAPPPTVCQ CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]