| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is tklG
Identifier: 197116681
GI number: 197116681
Start: 338907
End: 339512
Strand: Direct
Name: tklG
Synonym: Gbem_0281
Alternate gene names: NA
Gene position: 338907-339512 (Clockwise)
Preceding gene: 197116680
Following gene: 197116682
Centisome position: 7.34
GC content: 63.86
Gene sequence:
>606_bases ATGATGCGCAGGGTGCTTGCGTCCAGCGGCGGCTTCACCTACATGACGGTTCTCGTCATCGTGGTCGTGGTCGGCATCGC GGCGTCGCGTGGCGCCATCGTCTGGAAGACAGCCATGCAGCGGGAGAAGGAGATCGAACTCCTCTCCCGCGGCACGCAAA TCCGGGACGCGCTGAGGCGCTGGTACAAGGTGAAGGTGGTCCCGGGGGCGACGGAAGTCACACAGATCGACCCACGGGTG CCAGAACCTCCAAGCCCCCCGGAGCTGAAGGCGCTCTTGAAGGACCCCAACCTCCCCGGGAACGTACGATACCTCAGGCC CATCGCCCTCATCGACCCGATGAGCGAGAAGCCCGAGAAGGAATGGGACGTCATCAGGGAAAACGGCAAGATCGTCGGCG TCAAGAGCAGCAGCGAGAAGGAGCCGCTCAAGCAGGGGAACTTCCCCTTGGACCTGCACCCGGCCGACTTCGAGAAGAAG AAAAAGTACAGCGAGTGGGAGTTCCGCTACAAACGCGTTGCTCCCCCCCCTGGCACCAAGACGACAGCCATCCCAGGCGC CACGCCCGCCGGCCAGCCGGCACTCCCGGGGAACGCTGGAAGATAA
Upstream 100 bases:
>100_bases GGTTCGGGCTTTCCGGCAAATCCGACGAACTCCTCAAGTATTTCGGGCTGAACGCCGAGACGCTGATCGAGCAGGCGAGG GAGATCGTTTCGAGGAAGAA
Downstream 100 bases:
>100_bases AAGAAGCAAAGGCTGATGCCGCGCCCCCGTCCAATCCTGGAACCGGGGGCGTTGTGAAAAGATTCACCCACTCAACCGGA GGCACTCCTGATTTTCAAGA
Product: type II secretion system pseudopilin
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MMRRVLASSGGFTYMTVLVIVVVVGIAASRGAIVWKTAMQREKEIELLSRGTQIRDALRRWYKVKVVPGATEVTQIDPRV PEPPSPPELKALLKDPNLPGNVRYLRPIALIDPMSEKPEKEWDVIRENGKIVGVKSSSEKEPLKQGNFPLDLHPADFEKK KKYSEWEFRYKRVAPPPGTKTTAIPGATPAGQPALPGNAGR
Sequences:
>Translated_201_residues MMRRVLASSGGFTYMTVLVIVVVVGIAASRGAIVWKTAMQREKEIELLSRGTQIRDALRRWYKVKVVPGATEVTQIDPRV PEPPSPPELKALLKDPNLPGNVRYLRPIALIDPMSEKPEKEWDVIRENGKIVGVKSSSEKEPLKQGNFPLDLHPADFEKK KKYSEWEFRYKRVAPPPGTKTTAIPGATPAGQPALPGNAGR >Mature_201_residues MMRRVLASSGGFTYMTVLVIVVVVGIAASRGAIVWKTAMQREKEIELLSRGTQIRDALRRWYKVKVVPGATEVTQIDPRV PEPPSPPELKALLKDPNLPGNVRYLRPIALIDPMSEKPEKEWDVIRENGKIVGVKSSSEKEPLKQGNFPLDLHPADFEKK KKYSEWEFRYKRVAPPPGTKTTAIPGATPAGQPALPGNAGR
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22302; Mature: 22302
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRRVLASSGGFTYMTVLVIVVVVGIAASRGAIVWKTAMQREKEIELLSRGTQIRDALRR CCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHH WYKVKVVPGATEVTQIDPRVPEPPSPPELKALLKDPNLPGNVRYLRPIALIDPMSEKPEK HEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCEEECEEHEECCCCCCCCH EWDVIRENGKIVGVKSSSEKEPLKQGNFPLDLHPADFEKKKKYSEWEFRYKRVAPPPGTK HHHHHHCCCCEEEECCCCCCCHHHHCCCCEECCCCCCHHHHCCCCHHHEEEECCCCCCCC TTAIPGATPAGQPALPGNAGR CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMRRVLASSGGFTYMTVLVIVVVVGIAASRGAIVWKTAMQREKEIELLSRGTQIRDALRR CCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHH WYKVKVVPGATEVTQIDPRVPEPPSPPELKALLKDPNLPGNVRYLRPIALIDPMSEKPEK HEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCEEECEEHEECCCCCCCCH EWDVIRENGKIVGVKSSSEKEPLKQGNFPLDLHPADFEKKKKYSEWEFRYKRVAPPPGTK HHHHHHCCCCEEEECCCCCCCHHHHCCCCEECCCCCCHHHHCCCCHHHEEEECCCCCCCC TTAIPGATPAGQPALPGNAGR CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA