Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116555

Identifier: 197116555

GI number: 197116555

Start: 185855

End: 186283

Strand: Direct

Name: 197116555

Synonym: Gbem_0155

Alternate gene names: NA

Gene position: 185855-186283 (Clockwise)

Preceding gene: 197116554

Following gene: 197116556

Centisome position: 4.03

GC content: 60.37

Gene sequence:

>429_bases
ATGCGCACCAAGGCAACCATGTTATCCCTGTTGCTGGTCATGCTCTTTGCCACGTCTTCCTTCGCGATCGAGGGGCAGCA
ACCCGAAGCGATAGCCGAGAAGATGGCGTTCAAGCTGGTCCGGGGAGTCACGAACGTGGCAACATCGATTGTCGAGATCC
CCAAACAGTCGTACCTCACGGTGCGGGACCGCGGCGCAGTAGGGTATGTAGTCGGGCCGCTCAAGGGTTTCGGGATGGGC
GTTTACCGTCTCTTCACCGGTCTGACCGAGACCGTATTCTTTGCAGTGCCCCAGCCGGGCTATTACGATCCCATGATCCA
GCCGGAATTCGTCTGGGAGGGGTGGGACGCAAAGAGGGTCGAGCCGAGAGCGCAAACCGTCGCCGTGCCGGCCGAACCCG
CCGAACCCGCAGAGAAAAAGGGGGATTAG

Upstream 100 bases:

>100_bases
GGGGCGAGTAGCGGTAGTGATGCCGTTCTTGCCAATGAAAACCATCTATGTTAAAAGAACATGAGTTTTTTACCAACCCG
TAGCCCGAAGAGGAGCCAAA

Downstream 100 bases:

>100_bases
AGCTAATGCGCAAGTATGTCGTGGTGATGGCTTTGCTGGTTCTGGCCCTGGCAGGTGCGGTTGACATGGCGCAAGCCGAC
GATCGCAACGTCGACAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRTKATMLSLLLVMLFATSSFAIEGQQPEAIAEKMAFKLVRGVTNVATSIVEIPKQSYLTVRDRGAVGYVVGPLKGFGMG
VYRLFTGLTETVFFAVPQPGYYDPMIQPEFVWEGWDAKRVEPRAQTVAVPAEPAEPAEKKGD

Sequences:

>Translated_142_residues
MRTKATMLSLLLVMLFATSSFAIEGQQPEAIAEKMAFKLVRGVTNVATSIVEIPKQSYLTVRDRGAVGYVVGPLKGFGMG
VYRLFTGLTETVFFAVPQPGYYDPMIQPEFVWEGWDAKRVEPRAQTVAVPAEPAEPAEKKGD
>Mature_142_residues
MRTKATMLSLLLVMLFATSSFAIEGQQPEAIAEKMAFKLVRGVTNVATSIVEIPKQSYLTVRDRGAVGYVVGPLKGFGMG
VYRLFTGLTETVFFAVPQPGYYDPMIQPEFVWEGWDAKRVEPRAQTVAVPAEPAEPAEKKGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15602; Mature: 15602

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTKATMLSLLLVMLFATSSFAIEGQQPEAIAEKMAFKLVRGVTNVATSIVEIPKQSYLT
CCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VRDRGAVGYVVGPLKGFGMGVYRLFTGLTETVFFAVPQPGYYDPMIQPEFVWEGWDAKRV
EECCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEECCCCCCCC
EPRAQTVAVPAEPAEPAEKKGD
CCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRTKATMLSLLLVMLFATSSFAIEGQQPEAIAEKMAFKLVRGVTNVATSIVEIPKQSYLT
CCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VRDRGAVGYVVGPLKGFGMGVYRLFTGLTETVFFAVPQPGYYDPMIQPEFVWEGWDAKRV
EECCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEECCCCCCCC
EPRAQTVAVPAEPAEPAEKKGD
CCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA