Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116556

Identifier: 197116556

GI number: 197116556

Start: 186289

End: 186657

Strand: Direct

Name: 197116556

Synonym: Gbem_0156

Alternate gene names: NA

Gene position: 186289-186657 (Clockwise)

Preceding gene: 197116555

Following gene: 197116558

Centisome position: 4.04

GC content: 61.79

Gene sequence:

>369_bases
ATGCGCAAGTATGTCGTGGTGATGGCTTTGCTGGTTCTGGCCCTGGCAGGTGCGGTTGACATGGCGCAAGCCGACGATCG
CAACGTCGACAGCGCTGCCCCGCAGGATGTCGTCGACGGGATGGCCAACAAGCTGGTGCGCGGTGTGGCCAACATCGGCA
CCGGGTGGATGGAGTTCCCCAAGCAGATCTACCTGACCTGCAGGGACGACGGGTTTGCCAAGGGGCTCACCGTGGGACCG
CTTAAAGGAATCGGCATGACAGTCGTGCGCACCGTCGCCGGCGCCGGGGAAACCGCGACCTTCTTCCTCGCCTATCCCGG
CTTTTACGATCCGTATTTCGACCCGGCCTATGTCTGGCAGAAAGAGTAA

Upstream 100 bases:

>100_bases
GGGAGGGGTGGGACGCAAAGAGGGTCGAGCCGAGAGCGCAAACCGTCGCCGTGCCGGCCGAACCCGCCGAACCCGCAGAG
AAAAAGGGGGATTAGAGCTA

Downstream 100 bases:

>100_bases
ACTGCAGGTGGCCGCTTAGCCGGTCGCGGCAGTAAAGCAAGAAAAGAAAAGGGGCAGCCGGATGAAACCGGCGCCCCTTT
TCTTTTACCGAAGCAACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MRKYVVVMALLVLALAGAVDMAQADDRNVDSAAPQDVVDGMANKLVRGVANIGTGWMEFPKQIYLTCRDDGFAKGLTVGP
LKGIGMTVVRTVAGAGETATFFLAYPGFYDPYFDPAYVWQKE

Sequences:

>Translated_122_residues
MRKYVVVMALLVLALAGAVDMAQADDRNVDSAAPQDVVDGMANKLVRGVANIGTGWMEFPKQIYLTCRDDGFAKGLTVGP
LKGIGMTVVRTVAGAGETATFFLAYPGFYDPYFDPAYVWQKE
>Mature_122_residues
MRKYVVVMALLVLALAGAVDMAQADDRNVDSAAPQDVVDGMANKLVRGVANIGTGWMEFPKQIYLTCRDDGFAKGLTVGP
LKGIGMTVVRTVAGAGETATFFLAYPGFYDPYFDPAYVWQKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13187; Mature: 13187

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYVVVMALLVLALAGAVDMAQADDRNVDSAAPQDVVDGMANKLVRGVANIGTGWMEFP
CCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCC
KQIYLTCRDDGFAKGLTVGPLKGIGMTVVRTVAGAGETATFFLAYPGFYDPYFDPAYVWQ
HHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEE
KE
CC
>Mature Secondary Structure
MRKYVVVMALLVLALAGAVDMAQADDRNVDSAAPQDVVDGMANKLVRGVANIGTGWMEFP
CCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCC
KQIYLTCRDDGFAKGLTVGPLKGIGMTVVRTVAGAGETATFFLAYPGFYDPYFDPAYVWQ
HHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEE
KE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA